RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 ABCC4O15439 1325 aa13.47□□□□□ -0.25
CDK5RAP3-225ENST00000582482 MEIS3Q99687 375 aa13.47□□□□□ -0.25
CDK5RAP3-225ENST00000582482 SIRT1Q96EB6 747 aa13.47□□□□□ -0.25
CDK5RAP3-225ENST00000582482 C22orf23Q9BZE7 217 aa13.47□□□□□ -0.25
CDK5RAP3-225ENST00000582482 FER1L4A9Z1Z3 1794 aa13.47□□□□□ -0.25
CDK5RAP3-225ENST00000582482 MSH6P52701 1360 aa13.46□□□□□ -0.25
CDK5RAP3-225ENST00000582482 SLC4A2P04920 1241 aa13.46□□□□□ -0.25
CDK5RAP3-225ENST00000582482 TSHZ3Q63HK5 1081 aa13.46□□□□□ -0.25
CDK5RAP3-225ENST00000582482 ABTB2Q8N961 1025 aa13.46□□□□□ -0.25
CDK5RAP3-225ENST00000582482 RBM42Q9BTD8 480 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-225ENST00000582482 PTCH1Q13635 1447 aa13.45□□□□□ -0.26
CDK5RAP3-225ENST00000582482 SSH2Q76I76 1423 aa13.45□□□□□ -0.26
CDK5RAP3-225ENST00000582482 RNF216Q9NWF9 866 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-225ENST00000582482 TSPYL4Q9UJ04 414 aa13.45□□□□□ -0.26
CDK5RAP3-225ENST00000582482 PIK3C2AO00443 1686 aa13.45□□□□□ -0.26
CDK5RAP3-225ENST00000582482 CHL1O00533 1208 aa13.45□□□□□ -0.26
CDK5RAP3-225ENST00000582482 RGS12O14924 1447 aa13.45□□□□□ -0.26
CDK5RAP3-225ENST00000582482 CD2BP2O95400 341 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-225ENST00000582482 UPF2Q9HAU5 1272 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-225ENST00000582482 BRPF3Q9ULD4 1205 aa13.44□□□□□ -0.26
CDK5RAP3-225ENST00000582482 CRB1P82279 1406 aa13.43□□□□□ -0.26
CDK5RAP3-225ENST00000582482 LMOD2Q6P5Q4 547 aa13.43□□□□□ -0.26
CDK5RAP3-225ENST00000582482 THEMISQ8N1K5 641 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-225ENST00000582482 LRRC59Q96AG4 307 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP3-225ENST00000582482 TBX22Q9Y458 520 aa13.43□□□□□ -0.26
CDK5RAP3-225ENST00000582482 GSPT1P15170 499 aaKnown RBP13.42□□□□□ -0.26
CDK5RAP3-225ENST00000582482 CALD1Q05682 793 aaKnown RBP13.42□□□□□ -0.26
CDK5RAP3-225ENST00000582482 LMOD3Q0VAK6 560 aa13.42□□□□□ -0.26
CDK5RAP3-225ENST00000582482 HOXC9P31274 260 aa13.42□□□□□ -0.26
CDK5RAP3-225ENST00000582482 USP31Q70CQ4 1352 aa13.42□□□□□ -0.26
CDK5RAP3-225ENST00000582482 AAMPQ13685 434 aa13.41□□□□□ -0.26
CDK5RAP3-225ENST00000582482 ANTXR1Q9H6X2 564 aa13.41□□□□□ -0.26
CDK5RAP3-225ENST00000582482 NALCNQ8IZF0 1738 aa13.41□□□□□ -0.26
CDK5RAP3-225ENST00000582482 ANXA1P04083 346 aa13.41□□□□□ -0.26
CDK5RAP3-225ENST00000582482 RTF1Q92541 710 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-225ENST00000582482 RGPD1P0DJD0 1748 aa13.41□□□□□ -0.26
CDK5RAP3-225ENST00000582482 ESCO1Q5FWF5 840 aa13.4□□□□□ -0.26
CDK5RAP3-225ENST00000582482 TBC1D9Q6ZT07 1266 aa13.4□□□□□ -0.26
CDK5RAP3-225ENST00000582482 DDX17Q92841 729 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-225ENST00000582482 ORAI2Q96SN7 254 aa13.4□□□□□ -0.26
CDK5RAP3-225ENST00000582482 PIK3R4Q99570 1358 aa13.4□□□□□ -0.26
CDK5RAP3-225ENST00000582482 ARHGAP23Q9P227 1491 aa13.4□□□□□ -0.26
CDK5RAP3-225ENST00000582482 KCNQ3O43525 872 aa13.4□□□□□ -0.26
CDK5RAP3-225ENST00000582482 FLT4P35916 1363 aa13.4□□□□□ -0.26
CDK5RAP3-225ENST00000582482 IL17REQ8NFR9 667 aa13.4□□□□□ -0.26
CDK5RAP3-225ENST00000582482 FMN2Q9NZ56 1722 aa13.4□□□□□ -0.26
CDK5RAP3-225ENST00000582482 BRPF1P55201 1214 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP3-225ENST00000582482 SLIT1O75093 1534 aa13.39□□□□□ -0.27
CDK5RAP3-225ENST00000582482 ARHGAP45Q92619 1136 aa13.39□□□□□ -0.27
CDK5RAP3-225ENST00000582482 API5Q9BZZ5 524 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP3-225ENST00000582482 SBNO1A3KN83 1393 aa13.38□□□□□ -0.27
CDK5RAP3-225ENST00000582482 BECN1Q14457 450 aa13.38□□□□□ -0.27
CDK5RAP3-225ENST00000582482 GSE1Q14687 1217 aa13.38□□□□□ -0.27
CDK5RAP3-225ENST00000582482 CEP85Q6P2H3 762 aa13.38□□□□□ -0.27
CDK5RAP3-225ENST00000582482 GZF1Q9H116 711 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP3-225ENST00000582482 LGR6Q9HBX8 967 aa13.38□□□□□ -0.27
CDK5RAP3-225ENST00000582482 ATP10DQ9P241 1426 aa13.38□□□□□ -0.27
CDK5RAP3-225ENST00000582482 EXOC6BQ9Y2D4 811 aa13.38□□□□□ -0.27
CDK5RAP3-225ENST00000582482 MARF1Q9Y4F3 1742 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP3-225ENST00000582482 IGSF1Q8N6C5 1336 aa13.37□□□□□ -0.27
CDK5RAP3-225ENST00000582482 NBPF6Q5VWK0 638 aa13.37□□□□□ -0.27
CDK5RAP3-225ENST00000582482 PLEKHM2Q8IWE5 1019 aa13.37□□□□□ -0.27
CDK5RAP3-225ENST00000582482 NBPF4Q96M43 638 aa13.37□□□□□ -0.27
CDK5RAP3-225ENST00000582482 PHAXQ9H814 394 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP3-225ENST00000582482 KIF2CQ99661 725 aa13.37□□□□□ -0.27
CDK5RAP3-225ENST00000582482 EIF2S2P20042 333 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-225ENST00000582482 PHF8Q9UPP1 1060 aa13.36□□□□□ -0.27
CDK5RAP3-225ENST00000582482 RTL1A6NKG5 1358 aa13.36□□□□□ -0.27
CDK5RAP3-225ENST00000582482 TTC21AQ8NDW8 1320 aa13.36□□□□□ -0.27
CDK5RAP3-225ENST00000582482 INTS3Q68E01 1043 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-225ENST00000582482 USP35Q9P2H5 1018 aa13.36□□□□□ -0.27
CDK5RAP3-225ENST00000582482 ARHGEF10O15013 1369 aa13.36□□□□□ -0.27
CDK5RAP3-225ENST00000582482 XRN1Q8IZH2 1706 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-225ENST00000582482 FKBP5Q13451 457 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-225ENST00000582482 GCC1Q96CN9 775 aa13.35□□□□□ -0.27
CDK5RAP3-225ENST00000582482 RGPD2P0DJD1 1756 aa13.35□□□□□ -0.27
CDK5RAP3-225ENST00000582482 NWD1Q149M9 1564 aa13.34□□□□□ -0.27
CDK5RAP3-225ENST00000582482 PNMA6EA0A0J9YXQ4 647 aa13.34□□□□□ -0.27
CDK5RAP3-225ENST00000582482 PRAMEF22A3QJZ6 481 aa13.34□□□□□ -0.27
CDK5RAP3-225ENST00000582482 PSME1Q06323 249 aa13.34□□□□□ -0.27
CDK5RAP3-225ENST00000582482 BMP2KLQ5H9B9 411 aa13.34□□□□□ -0.27
CDK5RAP3-225ENST00000582482 MPRIPQ6WCQ1 1025 aa13.34□□□□□ -0.27
CDK5RAP3-225ENST00000582482 GNAT3A8MTJ3 354 aa13.33□□□□□ -0.28
CDK5RAP3-225ENST00000582482 ANKRD44Q8N8A2 993 aa13.33□□□□□ -0.28
CDK5RAP3-225ENST00000582482 DCTPP1Q9H773 170 aa13.33□□□□□ -0.28
CDK5RAP3-225ENST00000582482 KDRP35968 1356 aa13.32□□□□□ -0.28
CDK5RAP3-225ENST00000582482 FLIIQ13045 1269 aa13.32□□□□□ -0.28
CDK5RAP3-225ENST00000582482 SDSP20132 328 aa13.31□□□□□ -0.28
CDK5RAP3-225ENST00000582482 AXIN2Q9Y2T1 843 aa13.31□□□□□ -0.28
CDK5RAP3-225ENST00000582482 AK9Q5TCS8 1911 aa13.31□□□□□ -0.28
CDK5RAP3-225ENST00000582482 MAP4K4O95819 1239 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP3-225ENST00000582482 ANKLE2Q86XL3 938 aa13.31□□□□□ -0.28
CDK5RAP3-225ENST00000582482 CHAMP1Q96JM3 812 aa13.31□□□□□ -0.28
CDK5RAP3-225ENST00000582482 LTN1O94822 1766 aa13.3□□□□□ -0.28
CDK5RAP3-225ENST00000582482 ZC3H6P61129 1189 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-225ENST00000582482 TTC22Q5TAA0 569 aa13.3□□□□□ -0.28
CDK5RAP3-225ENST00000582482 HSCBQ8IWL3 235 aa13.3□□□□□ -0.28
CDK5RAP3-225ENST00000582482 GAS2L2Q8NHY3 880 aa13.3□□□□□ -0.28
CDK5RAP3-225ENST00000582482 LRRFIP2Q9Y608 721 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-225ENST00000582482 KIAA0232Q92628 1395 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms