RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 NME9Q86XW9 330 aa18.09■□□□□ 0.49
CSNK1D-218ENST00000581655 CCNL1Q9UK58 526 aaPredicted RBP18.09■□□□□ 0.49
CSNK1D-218ENST00000581655 NSD2O96028 1365 aa18.08■□□□□ 0.49
CSNK1D-218ENST00000581655 CD2APQ9Y5K6 639 aa18.07■□□□□ 0.48
CSNK1D-218ENST00000581655 LTV1Q96GA3 475 aaPredicted RBP18.05■□□□□ 0.48
CSNK1D-218ENST00000581655 SBNO2Q9Y2G9 1366 aa18.04■□□□□ 0.48
CSNK1D-218ENST00000581655 FAM208AQ9UK61 1670 aaKnown RBP18.03■□□□□ 0.48
CSNK1D-218ENST00000581655 KIF3CO14782 793 aa18.03■□□□□ 0.48
CSNK1D-218ENST00000581655 WWC3Q9ULE0 1092 aa18.03■□□□□ 0.48
CSNK1D-218ENST00000581655 USP47Q96K76 1375 aa18.03■□□□□ 0.48
CSNK1D-218ENST00000581655 CD163L1Q9NR16 1453 aa18.02■□□□□ 0.48
CSNK1D-218ENST00000581655 IP6K1Q92551 441 aa18.02■□□□□ 0.48
CSNK1D-218ENST00000581655 C5P01031 1676 aa18■□□□□ 0.47
CSNK1D-218ENST00000581655 ZCRB1Q8TBF4 217 aaKnown RBP18■□□□□ 0.47
CSNK1D-218ENST00000581655 IGSF1Q8N6C5 1336 aa17.99■□□□□ 0.47
CSNK1D-218ENST00000581655 APLP1P51693 650 aa17.99■□□□□ 0.47
CSNK1D-218ENST00000581655 L3MBTL2Q969R5 705 aa17.99■□□□□ 0.47
CSNK1D-218ENST00000581655 ROCK2O75116 1388 aaKnown RBP17.99■□□□□ 0.47
CSNK1D-218ENST00000581655 RGPD2P0DJD1 1756 aa17.99■□□□□ 0.47
CSNK1D-218ENST00000581655 HDGFL2Q7Z4V5 671 aaPredicted RBP17.98■□□□□ 0.47
CSNK1D-218ENST00000581655 FLAD1Q8NFF5 587 aa17.98■□□□□ 0.47
CSNK1D-218ENST00000581655 TMC1Q8TDI8 760 aa17.98■□□□□ 0.47
CSNK1D-218ENST00000581655 TAF1LQ8IZX4 1826 aa17.98■□□□□ 0.47
CSNK1D-218ENST00000581655 MEGF6O75095 1541 aa17.98■□□□□ 0.47
CSNK1D-218ENST00000581655 EDC4Q6P2E9 1401 aaKnown RBP17.98■□□□□ 0.47
CSNK1D-218ENST00000581655 DNAJC5GQ8N7S2 189 aa17.96■□□□□ 0.47
CSNK1D-218ENST00000581655 SLC12A5Q9H2X9 1139 aa17.95■□□□□ 0.46
CSNK1D-218ENST00000581655 MAP3K19Q56UN5 1328 aa17.94■□□□□ 0.46
CSNK1D-218ENST00000581655 HOXC9P31274 260 aa17.93■□□□□ 0.46
CSNK1D-218ENST00000581655 A0A1W2PP64 1363 aa17.92■□□□□ 0.46
CSNK1D-218ENST00000581655 PALLDQ8WX93 1383 aa17.92■□□□□ 0.46
CSNK1D-218ENST00000581655 TOMM70O94826 608 aa17.92■□□□□ 0.46
CSNK1D-218ENST00000581655 AMPHP49418 695 aa17.92■□□□□ 0.46
CSNK1D-218ENST00000581655 AMIGO3Q86WK7 504 aa17.92■□□□□ 0.46
CSNK1D-218ENST00000581655 C4BP0C0L5 1744 aa17.92■□□□□ 0.46
CSNK1D-218ENST00000581655 TOGARAM1Q9Y4F4 1720 aa17.92■□□□□ 0.46
CSNK1D-218ENST00000581655 PHF14O94880 888 aa17.91■□□□□ 0.46
CSNK1D-218ENST00000581655 FBLN1P23142 703 aa17.91■□□□□ 0.46
CSNK1D-218ENST00000581655 HMGB2P26583 209 aaKnown RBP17.91■□□□□ 0.46
CSNK1D-218ENST00000581655 SMIM5Q71RC9 77 aa17.91■□□□□ 0.46
CSNK1D-218ENST00000581655 AK7Q96M32 723 aa17.91■□□□□ 0.46
CSNK1D-218ENST00000581655 TERF2IPQ9NYB0 399 aa17.91■□□□□ 0.46
CSNK1D-218ENST00000581655 CICQ96RK0 1608 aaPredicted RBP17.9■□□□□ 0.46
CSNK1D-218ENST00000581655 UBR3Q6ZT12 1888 aa17.9■□□□□ 0.46
CSNK1D-218ENST00000581655 USHBP1Q8N6Y0 703 aa17.89■□□□□ 0.45
CSNK1D-218ENST00000581655 CAPN15O75808 1086 aa17.88■□□□□ 0.45
CSNK1D-218ENST00000581655 COL13A1Q5TAT6 717 aaPredicted RBP17.88■□□□□ 0.45
CSNK1D-218ENST00000581655 NBPF6Q5VWK0 638 aa17.88■□□□□ 0.45
CSNK1D-218ENST00000581655 MPRIPQ6WCQ1 1025 aa17.88■□□□□ 0.45
CSNK1D-218ENST00000581655 RAPGEF4Q8WZA2 1011 aa17.88■□□□□ 0.45
CSNK1D-218ENST00000581655 NBPF4Q96M43 638 aa17.88■□□□□ 0.45
CSNK1D-218ENST00000581655 WDR90Q96KV7 1748 aa17.88■□□□□ 0.45
CSNK1D-218ENST00000581655 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.87■□□□□ 0.45
CSNK1D-218ENST00000581655 COG3Q96JB2 828 aa17.87■□□□□ 0.45
CSNK1D-218ENST00000581655 CGNL1Q0VF96 1302 aa17.87■□□□□ 0.45
CSNK1D-218ENST00000581655 NMRK2Q9NPI5 230 aa17.86■□□□□ 0.45
CSNK1D-218ENST00000581655 NSD3Q9BZ95 1437 aa17.86■□□□□ 0.45
CSNK1D-218ENST00000581655 ITGB4P16144 1822 aa17.85■□□□□ 0.45
CSNK1D-218ENST00000581655 TATP17735 454 aaPredicted RBP17.85■□□□□ 0.45
CSNK1D-218ENST00000581655 HTRA3P83110 453 aa17.85■□□□□ 0.45
CSNK1D-218ENST00000581655 PCDH11XQ9BZA7 1347 aa17.84■□□□□ 0.45
CSNK1D-218ENST00000581655 PCDH11YQ9BZA8 1340 aa17.84■□□□□ 0.45
CSNK1D-218ENST00000581655 SSFA2P28290 1259 aa17.84■□□□□ 0.45
CSNK1D-218ENST00000581655 SMARCC1Q92922 1105 aaPredicted RBP17.84■□□□□ 0.45
CSNK1D-218ENST00000581655 KLRG1Q96E93 195 aa17.84■□□□□ 0.45
CSNK1D-218ENST00000581655 SIN3AQ96ST3 1273 aa17.84■□□□□ 0.45
CSNK1D-218ENST00000581655 PXDNLA1KZ92 1463 aa17.83■□□□□ 0.45
CSNK1D-218ENST00000581655 RTL1A6NKG5 1358 aa17.83■□□□□ 0.45
CSNK1D-218ENST00000581655 BCS1LQ9Y276 419 aa17.83■□□□□ 0.44
CSNK1D-218ENST00000581655 N4BP2Q86UW6 1770 aaPredicted RBP17.83■□□□□ 0.44
CSNK1D-218ENST00000581655 KIAA1551Q9HCM1 1747 aa17.82■□□□□ 0.44
CSNK1D-218ENST00000581655 RRS1Q15050 365 aaKnown RBP17.82■□□□□ 0.44
CSNK1D-218ENST00000581655 PCNTO95613 3336 aa17.82■□□□□ 0.44
CSNK1D-218ENST00000581655 CYP27B1O15528 508 aa17.81■□□□□ 0.44
CSNK1D-218ENST00000581655 MMP10P09238 476 aa17.81■□□□□ 0.44
CSNK1D-218ENST00000581655 TNS4Q8IZW8 715 aa17.81■□□□□ 0.44
CSNK1D-218ENST00000581655 JMYQ8N9B5 988 aa17.81■□□□□ 0.44
CSNK1D-218ENST00000581655 RBM46Q8TBY0 533 aaKnown RBP17.81■□□□□ 0.44
CSNK1D-218ENST00000581655 CARD11Q9BXL7 1154 aa17.81■□□□□ 0.44
CSNK1D-218ENST00000581655 MAP2P11137 1827 aaKnown RBP17.81■□□□□ 0.44
CSNK1D-218ENST00000581655 KIF13BQ9NQT8 1826 aa17.81■□□□□ 0.44
CSNK1D-218ENST00000581655 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
CSNK1D-218ENST00000581655 NEUROD1Q13562 356 aa17.8■□□□□ 0.44
CSNK1D-218ENST00000581655 ARHGAP27Q6ZUM4 889 aa17.8■□□□□ 0.44
CSNK1D-218ENST00000581655 LINC00116Q8NCU8 138 aa17.8■□□□□ 0.44
CSNK1D-218ENST00000581655 A0A0G2JLW4 131 aa17.79■□□□□ 0.44
CSNK1D-218ENST00000581655 C16orf71Q8IYS4 520 aaPredicted RBP17.79■□□□□ 0.44
CSNK1D-218ENST00000581655 PIGBQ92521 554 aa17.79■□□□□ 0.44
CSNK1D-218ENST00000581655 LOC102724428A0A0B4J2F2 783 aa17.78■□□□□ 0.44
CSNK1D-218ENST00000581655 GNPATO15228 680 aa17.78■□□□□ 0.44
CSNK1D-218ENST00000581655 SIK1P57059 783 aa17.78■□□□□ 0.44
CSNK1D-218ENST00000581655 TGFB2P61812 414 aa17.78■□□□□ 0.44
CSNK1D-218ENST00000581655 PUS7Q96PZ0 661 aaKnown RBP17.78■□□□□ 0.44
CSNK1D-218ENST00000581655 PRELPP51888 382 aa17.77■□□□□ 0.44
CSNK1D-218ENST00000581655 FCHSD2O94868 740 aa17.76■□□□□ 0.43
CSNK1D-218ENST00000581655 HSP90AB2PQ58FF8 381 aa17.76■□□□□ 0.43
CSNK1D-218ENST00000581655 C10orf71Q711Q0 1435 aa17.75■□□□□ 0.43
CSNK1D-218ENST00000581655 FSTL1Q12841 308 aa17.75■□□□□ 0.43
CSNK1D-218ENST00000581655 ITPK1Q13572 414 aa17.75■□□□□ 0.43
CSNK1D-218ENST00000581655 C9orf131Q5VYM1 1079 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms