RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 TATP17735 454 aaPredicted RBP17.16■□□□□ 0.34
SNORD55-201ENST00000581525 TNS1Q9HBL0 1735 aaKnown RBP17.16■□□□□ 0.34
SNORD55-201ENST00000581525 PARD3Q8TEW0 1356 aa17.15■□□□□ 0.34
SNORD55-201ENST00000581525 SBF2Q86WG5 1849 aa17.14■□□□□ 0.34
SNORD55-201ENST00000581525 APBA3O96018 575 aa17.14■□□□□ 0.33
SNORD55-201ENST00000581525 EN1Q05925 392 aaPredicted RBP17.14■□□□□ 0.33
SNORD55-201ENST00000581525 NKX1-1Q15270 411 aaPredicted RBP17.13■□□□□ 0.33
SNORD55-201ENST00000581525 PTF1AQ7RTS3 328 aa17.13■□□□□ 0.33
SNORD55-201ENST00000581525 KDRP35968 1356 aa17.13■□□□□ 0.33
SNORD55-201ENST00000581525 DDX54Q8TDD1 881 aaKnown RBP17.12■□□□□ 0.33
SNORD55-201ENST00000581525 SHANK3Q9BYB0 1731 aa17.11■□□□□ 0.33
SNORD55-201ENST00000581525 CYP27B1O15528 508 aa17.11■□□□□ 0.33
SNORD55-201ENST00000581525 KCNQ2O43526 872 aa17.11■□□□□ 0.33
SNORD55-201ENST00000581525 EZH2Q15910 746 aaKnown RBP17.11■□□□□ 0.33
SNORD55-201ENST00000581525 SPG7Q9UQ90 795 aa17.1■□□□□ 0.33
SNORD55-201ENST00000581525 PCDH11XQ9BZA7 1347 aa17.1■□□□□ 0.33
SNORD55-201ENST00000581525 PCDH11YQ9BZA8 1340 aa17.1■□□□□ 0.33
SNORD55-201ENST00000581525 PROM2Q8N271 834 aa17.09■□□□□ 0.33
SNORD55-201ENST00000581525 COL3A1P02461 1466 aaPredicted RBP17.09■□□□□ 0.33
SNORD55-201ENST00000581525 PKD1L3Q7Z443 1732 aa17.08■□□□□ 0.32
SNORD55-201ENST00000581525 DIAPH1O60610 1272 aaKnown RBP17.08■□□□□ 0.32
SNORD55-201ENST00000581525 PPP2R1AP30153 589 aa17.08■□□□□ 0.32
SNORD55-201ENST00000581525 NHSQ6T4R5 1651 aa17.07■□□□□ 0.32
SNORD55-201ENST00000581525 DDX10Q13206 875 aaKnown RBP17.07■□□□□ 0.32
SNORD55-201ENST00000581525 RGPD3A6NKT7 1758 aaPredicted RBP17.07■□□□□ 0.32
SNORD55-201ENST00000581525 RGPD4Q7Z3J3 1758 aa17.07■□□□□ 0.32
SNORD55-201ENST00000581525 AMOTQ4VCS5 1084 aa17.06■□□□□ 0.32
SNORD55-201ENST00000581525 ACSBG1Q96GR2 724 aa17.06■□□□□ 0.32
SNORD55-201ENST00000581525 PHKG2P15735 406 aa17.05■□□□□ 0.32
SNORD55-201ENST00000581525 PRIM1P49642 420 aaKnown RBP17.05■□□□□ 0.32
SNORD55-201ENST00000581525 SULT6B1Q6IMI4 303 aa17.05■□□□□ 0.32
SNORD55-201ENST00000581525 AEBP1Q8IUX7 1158 aa17.05■□□□□ 0.32
SNORD55-201ENST00000581525 IFNL2Q8IZJ0 200 aa17.05■□□□□ 0.32
SNORD55-201ENST00000581525 PLEKHO1Q53GL0 409 aaPredicted RBP17.04■□□□□ 0.32
SNORD55-201ENST00000581525 RREB1Q92766 1687 aa17.04■□□□□ 0.32
SNORD55-201ENST00000581525 RALBP1Q15311 655 aa17.03■□□□□ 0.32
SNORD55-201ENST00000581525 TXNRD1Q16881 649 aa17.02■□□□□ 0.32
SNORD55-201ENST00000581525 SRCAPQ6ZRS2 3230 aa17.02■□□□□ 0.32
SNORD55-201ENST00000581525 CFAP53Q96M91 514 aa17.01■□□□□ 0.31
SNORD55-201ENST00000581525 ERVV-2B6SEH9 535 aa16.99■□□□□ 0.31
SNORD55-201ENST00000581525 HSP90AB1P08238 724 aaKnown RBP16.99■□□□□ 0.31
SNORD55-201ENST00000581525 CNGB1Q14028 1251 aaPredicted RBP16.99■□□□□ 0.31
SNORD55-201ENST00000581525 DCAF5Q96JK2 942 aa16.99■□□□□ 0.31
SNORD55-201ENST00000581525 ZNF316A6NFI3 1004 aaPredicted RBP16.98■□□□□ 0.31
SNORD55-201ENST00000581525 SLC27A3Q5K4L6 730 aa16.98■□□□□ 0.31
SNORD55-201ENST00000581525 BTAF1O14981 1849 aa16.98■□□□□ 0.31
SNORD55-201ENST00000581525 NUP188Q5SRE5 1749 aa16.97■□□□□ 0.31
SNORD55-201ENST00000581525 HMOX1P09601 288 aa16.97■□□□□ 0.31
SNORD55-201ENST00000581525 NBPF14Q5TI25 921 aa16.97■□□□□ 0.31
SNORD55-201ENST00000581525 LRRC4BQ9NT99 713 aa16.97■□□□□ 0.31
SNORD55-201ENST00000581525 NUDCQ9Y266 331 aa16.97■□□□□ 0.31
SNORD55-201ENST00000581525 DOT1LQ8TEK3 1739 aa16.96■□□□□ 0.31
SNORD55-201ENST00000581525 FCHSD2O94868 740 aa16.96■□□□□ 0.31
SNORD55-201ENST00000581525 AKAP4Q5JQC9 854 aa16.96■□□□□ 0.31
SNORD55-201ENST00000581525 ZNF530Q6P9A1 599 aaPredicted RBP16.96■□□□□ 0.31
SNORD55-201ENST00000581525 PIGBQ92521 554 aa16.96■□□□□ 0.31
SNORD55-201ENST00000581525 RSPH6AQ9H0K4 717 aa16.96■□□□□ 0.31
SNORD55-201ENST00000581525 SYTL4Q96C24 671 aaPredicted RBP16.95■□□□□ 0.3
SNORD55-201ENST00000581525 TOGARAM1Q9Y4F4 1720 aa16.95■□□□□ 0.3
SNORD55-201ENST00000581525 MTHFSDQ2M296 383 aaKnown RBP16.94■□□□□ 0.3
SNORD55-201ENST00000581525 PRKRIP1Q9H875 184 aaPredicted RBP16.94■□□□□ 0.3
SNORD55-201ENST00000581525 ANO8Q9HCE9 1232 aaPredicted RBP16.94■□□□□ 0.3
SNORD55-201ENST00000581525 KDM6AO15550 1401 aaPredicted RBP16.94■□□□□ 0.3
SNORD55-201ENST00000581525 U2SURPO15042 1029 aaKnown RBP16.93■□□□□ 0.3
SNORD55-201ENST00000581525 HMGB2P26583 209 aaKnown RBP16.93■□□□□ 0.3
SNORD55-201ENST00000581525 R3HDM1Q15032 1099 aaKnown RBP16.93■□□□□ 0.3
SNORD55-201ENST00000581525 MPRIPQ6WCQ1 1025 aa16.93■□□□□ 0.3
SNORD55-201ENST00000581525 SMARCC1Q92922 1105 aaPredicted RBP16.93■□□□□ 0.3
SNORD55-201ENST00000581525 SLC15A2Q16348 729 aa16.92■□□□□ 0.3
SNORD55-201ENST00000581525 C1orf141Q5JVX7 400 aa16.92■□□□□ 0.3
SNORD55-201ENST00000581525 LY75O60449 1722 aa16.92■□□□□ 0.3
SNORD55-201ENST00000581525 MYBBP1AQ9BQG0 1328 aaKnown RBP16.92■□□□□ 0.3
SNORD55-201ENST00000581525 AKT1S1Q96B36 256 aa16.91■□□□□ 0.3
SNORD55-201ENST00000581525 TMOD3Q9NYL9 352 aa16.91■□□□□ 0.3
SNORD55-201ENST00000581525 KAT6BQ8WYB5 2073 aa16.91■□□□□ 0.3
SNORD55-201ENST00000581525 PAPPAQ13219 1627 aa16.91■□□□□ 0.3
SNORD55-201ENST00000581525 ITGB4P16144 1822 aa16.91■□□□□ 0.3
SNORD55-201ENST00000581525 PSDA5PKW4 1024 aaPredicted RBP16.9■□□□□ 0.3
SNORD55-201ENST00000581525 PHACTR3Q96KR7 559 aa16.9■□□□□ 0.3
SNORD55-201ENST00000581525 ATG3Q9NT62 314 aa16.9■□□□□ 0.3
SNORD55-201ENST00000581525 ADAMTS7Q9UKP4 1686 aa16.89■□□□□ 0.29
SNORD55-201ENST00000581525 RNMTO43148 476 aaKnown RBP16.89■□□□□ 0.29
SNORD55-201ENST00000581525 U2AF1L5P0DN76 240 aaPredicted RBP16.89■□□□□ 0.29
SNORD55-201ENST00000581525 U2AF1Q01081 240 aaKnown RBP eCLIP16.89■□□□□ 0.29
SNORD55-201ENST00000581525 GAS2L2Q8NHY3 880 aa16.89■□□□□ 0.29
SNORD55-201ENST00000581525 LGR6Q9HBX8 967 aa16.89■□□□□ 0.29
SNORD55-201ENST00000581525 PALLDQ8WX93 1383 aa16.89■□□□□ 0.29
SNORD55-201ENST00000581525 PRKAR2BP31323 418 aa16.88■□□□□ 0.29
SNORD55-201ENST00000581525 PLEKHF1Q96S99 279 aa16.88■□□□□ 0.29
SNORD55-201ENST00000581525 ASAP1Q9ULH1 1129 aa16.88■□□□□ 0.29
SNORD55-201ENST00000581525 CABP4P57796 275 aa16.87■□□□□ 0.29
SNORD55-201ENST00000581525 NFATC2IPQ8NCF5 419 aa16.87■□□□□ 0.29
SNORD55-201ENST00000581525 SLC52A2Q9HAB3 445 aa16.87■□□□□ 0.29
SNORD55-201ENST00000581525 STK32BQ9NY57 414 aa16.87■□□□□ 0.29
SNORD55-201ENST00000581525 CCNL1Q9UK58 526 aaPredicted RBP16.87■□□□□ 0.29
SNORD55-201ENST00000581525 GNAT3A8MTJ3 354 aa16.86■□□□□ 0.29
SNORD55-201ENST00000581525 ZNF827Q17R98 1081 aa16.86■□□□□ 0.29
SNORD55-201ENST00000581525 IL17REQ8NFR9 667 aa16.86■□□□□ 0.29
SNORD55-201ENST00000581525 MRC1P22897 1456 aa16.86■□□□□ 0.29
SNORD55-201ENST00000581525 LOC102724428A0A0B4J2F2 783 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms