RNA–Protein interactions for RNA: ENST00000581057.2

TRAPPC8-208, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-208ENST00000581057 CRTC2Q53ET0 693 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC8-208ENST00000581057 RETREG2Q8NC44 543 aa12.57□□□□□ -0.4
TRAPPC8-208ENST00000581057 USP17L15C9J2P7 530 aa12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 USP17L10C9JJH3 530 aa12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 USP17L13C9JLJ4 530 aa12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 USP17L12C9JPN9 530 aa12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 USP17L11C9JVI0 530 aa12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 USP17L21D6R901 530 aa12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 USP17L18D6R9N7 530 aa12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 USP17L22D6RA61 530 aa12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 USP17L17D6RBQ6 530 aa12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 USP17L19D6RCP7 530 aa12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 USP17L20D6RJB6 530 aa12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 ATG7O95352 703 aa12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 ATP1A2P50993 1020 aa12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 ERVK-9P63128 1117 aa12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 CLDN10P78369 228 aa12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 USP17L24Q0WX57 530 aa12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 DNAAF2Q9NVR5 837 aaKnown RBP12.56□□□□□ -0.4
TRAPPC8-208ENST00000581057 CSB-PGBD3P0DP91 1061 aa12.55□□□□□ -0.4
TRAPPC8-208ENST00000581057 WDR4P57081 412 aaKnown RBP12.55□□□□□ -0.4
TRAPPC8-208ENST00000581057 TRIM52Q96A61 297 aa12.55□□□□□ -0.4
TRAPPC8-208ENST00000581057 ZIC2O95409 532 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC8-208ENST00000581057 ITPKCQ96DU7 683 aa12.54□□□□□ -0.4
TRAPPC8-208ENST00000581057 NOVA2Q9UNW9 492 aaKnown RBP12.54□□□□□ -0.4
TRAPPC8-208ENST00000581057 FAM196BA6NMK8 535 aa12.53□□□□□ -0.4
TRAPPC8-208ENST00000581057 LILRA1O75019 489 aa12.53□□□□□ -0.4
TRAPPC8-208ENST00000581057 HPS1Q92902 700 aa12.53□□□□□ -0.4
TRAPPC8-208ENST00000581057 ZFAND3Q9H8U3 227 aa12.53□□□□□ -0.4
TRAPPC8-208ENST00000581057 KIAA1024Q9UPX6 916 aa12.53□□□□□ -0.4
TRAPPC8-208ENST00000581057 PCDHGA11Q9Y5H2 935 aa12.53□□□□□ -0.4
TRAPPC8-208ENST00000581057 ADD1P35611 737 aaKnown RBP12.52□□□□□ -0.41
TRAPPC8-208ENST00000581057 CBLBQ13191 982 aa12.52□□□□□ -0.41
TRAPPC8-208ENST00000581057 PTK7Q13308 1070 aa12.52□□□□□ -0.41
TRAPPC8-208ENST00000581057 OSBPL3Q9H4L5 887 aa12.52□□□□□ -0.41
TRAPPC8-208ENST00000581057 RBM19Q9Y4C8 960 aaKnown RBP12.52□□□□□ -0.41
TRAPPC8-208ENST00000581057 FAM187AA6NFU0 413 aa12.51□□□□□ -0.41
TRAPPC8-208ENST00000581057 TPCN2Q8NHX9 752 aa12.51□□□□□ -0.41
TRAPPC8-208ENST00000581057 CARNS1A5YM72 827 aa12.5□□□□□ -0.41
TRAPPC8-208ENST00000581057 ZBTB7BO15156 539 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC8-208ENST00000581057 CCDC102BQ68D86 513 aa12.5□□□□□ -0.41
TRAPPC8-208ENST00000581057 ANKMY2Q8IV38 441 aa12.5□□□□□ -0.41
TRAPPC8-208ENST00000581057 LARGE2Q8N3Y3 721 aa12.5□□□□□ -0.41
TRAPPC8-208ENST00000581057 ZMIZ1Q9ULJ6 1067 aa12.5□□□□□ -0.41
TRAPPC8-208ENST00000581057 STAU1O95793 577 aaKnown RBP12.49□□□□□ -0.41
TRAPPC8-208ENST00000581057 TIMP2P16035 220 aa12.49□□□□□ -0.41
TRAPPC8-208ENST00000581057 DPYDQ12882 1025 aa12.49□□□□□ -0.41
TRAPPC8-208ENST00000581057 FAM200AQ8TCP9 573 aa12.49□□□□□ -0.41
TRAPPC8-208ENST00000581057 STK32AQ8WU08 396 aa12.49□□□□□ -0.41
TRAPPC8-208ENST00000581057 KLF16Q9BXK1 252 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC8-208ENST00000581057 GFRA3O60609 400 aa12.47□□□□□ -0.41
TRAPPC8-208ENST00000581057 ELOAQ14241 798 aaKnown RBP12.47□□□□□ -0.41
TRAPPC8-208ENST00000581057 CYP2U1Q7Z449 544 aa12.47□□□□□ -0.41
TRAPPC8-208ENST00000581057 SFI1A8K8P3 1242 aa12.46□□□□□ -0.41
TRAPPC8-208ENST00000581057 PDIA4P13667 645 aaKnown RBP12.46□□□□□ -0.41
TRAPPC8-208ENST00000581057 TMEM164Q5U3C3 297 aa12.46□□□□□ -0.41
TRAPPC8-208ENST00000581057 AGBL1Q96MI9 1066 aa12.46□□□□□ -0.41
TRAPPC8-208ENST00000581057 RAB6BQ9NRW1 208 aa12.46□□□□□ -0.41
TRAPPC8-208ENST00000581057 SIX5Q8N196 739 aa12.45□□□□□ -0.42
TRAPPC8-208ENST00000581057 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRAPPC8-208ENST00000581057 CAPN5O15484 640 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC8-208ENST00000581057 ADH1AP07327 375 aa12.44□□□□□ -0.42
TRAPPC8-208ENST00000581057 RELBQ01201 579 aa12.44□□□□□ -0.42
TRAPPC8-208ENST00000581057 ARHGEF10LQ9HCE6 1279 aa12.44□□□□□ -0.42
TRAPPC8-208ENST00000581057 GDF10P55107 478 aa12.43□□□□□ -0.42
TRAPPC8-208ENST00000581057 SEC13P55735 322 aa12.43□□□□□ -0.42
TRAPPC8-208ENST00000581057 SERTAD1Q9UHV2 236 aa12.43□□□□□ -0.42
TRAPPC8-208ENST00000581057 LGR5O75473 907 aa12.42□□□□□ -0.42
TRAPPC8-208ENST00000581057 PKDCCQ504Y2 493 aa12.42□□□□□ -0.42
TRAPPC8-208ENST00000581057 Q6ZVU0 165 aa12.42□□□□□ -0.42
TRAPPC8-208ENST00000581057 ZNF395Q9H8N7 513 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC8-208ENST00000581057 ETNK1Q9HBU6 452 aa12.42□□□□□ -0.42
TRAPPC8-208ENST00000581057 TMEM229AB2RXF0 380 aa12.41□□□□□ -0.42
TRAPPC8-208ENST00000581057 DKK1O94907 266 aa12.41□□□□□ -0.42
TRAPPC8-208ENST00000581057 GNRH1P01148 92 aa12.41□□□□□ -0.42
TRAPPC8-208ENST00000581057 ZNF358Q9NW07 568 aa12.41□□□□□ -0.42
TRAPPC8-208ENST00000581057 USTQ9Y2C2 406 aa12.41□□□□□ -0.42
TRAPPC8-208ENST00000581057 TMEM88BA6NKF7 163 aa12.4□□□□□ -0.42
TRAPPC8-208ENST00000581057 SCNN1DP51172 638 aa12.4□□□□□ -0.42
TRAPPC8-208ENST00000581057 PDE4CQ08493 712 aa12.4□□□□□ -0.42
TRAPPC8-208ENST00000581057 HINFPQ9BQA5 517 aa12.4□□□□□ -0.42
TRAPPC8-208ENST00000581057 MEN1O00255 615 aa12.39□□□□□ -0.43
TRAPPC8-208ENST00000581057 NRG2O14511 850 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC8-208ENST00000581057 PTGIRP43119 386 aa12.39□□□□□ -0.43
TRAPPC8-208ENST00000581057 KDF1Q8NAX2 398 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC8-208ENST00000581057 A0A1W2PRU2 124 aa12.38□□□□□ -0.43
TRAPPC8-208ENST00000581057 INHAP05111 366 aa12.38□□□□□ -0.43
TRAPPC8-208ENST00000581057 ESCO1Q5FWF5 840 aa12.38□□□□□ -0.43
TRAPPC8-208ENST00000581057 MEIOBQ8N635 442 aa12.38□□□□□ -0.43
TRAPPC8-208ENST00000581057 TSEN2Q8NCE0 465 aaKnown RBP12.38□□□□□ -0.43
TRAPPC8-208ENST00000581057 DGAT1O75907 488 aa12.36□□□□□ -0.43
TRAPPC8-208ENST00000581057 UPP2O95045 317 aa12.36□□□□□ -0.43
TRAPPC8-208ENST00000581057 CNKSR1Q969H4 720 aa12.36□□□□□ -0.43
TRAPPC8-208ENST00000581057 BACH1O14867 736 aa12.35□□□□□ -0.43
TRAPPC8-208ENST00000581057 IL2RAP01589 272 aa12.35□□□□□ -0.43
TRAPPC8-208ENST00000581057 FAM69CQ0P6D2 419 aa12.35□□□□□ -0.43
TRAPPC8-208ENST00000581057 C6orf118Q5T5N4 469 aa12.35□□□□□ -0.43
TRAPPC8-208ENST00000581057 TNS4Q8IZW8 715 aa12.35□□□□□ -0.43
TRAPPC8-208ENST00000581057 NLRP3Q96P20 1036 aa12.35□□□□□ -0.43
TRAPPC8-208ENST00000581057 TRAIPQ9BWF2 469 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms