RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 BLOC1S2Q6QNY1 142 aa18.06■□□□□ 0.48
ITGB4-206ENST00000579662 PRPF40AO75400 957 aaKnown RBP18.05■□□□□ 0.48
ITGB4-206ENST00000579662 CDK5RAP3Q96JB5 506 aa18.05■□□□□ 0.48
ITGB4-206ENST00000579662 IGHMBP2P38935 993 aaKnown RBP18.05■□□□□ 0.48
ITGB4-206ENST00000579662 TEX14Q8IWB6 1497 aa18.05■□□□□ 0.48
ITGB4-206ENST00000579662 CIZ1Q9ULV3 898 aaPredicted RBP18.05■□□□□ 0.48
ITGB4-206ENST00000579662 HSP90AA2PQ14568 343 aaPredicted RBP18.05■□□□□ 0.48
ITGB4-206ENST00000579662 TMOD3Q9NYL9 352 aa18.05■□□□□ 0.48
ITGB4-206ENST00000579662 NUP160Q12769 1436 aa18.05■□□□□ 0.48
ITGB4-206ENST00000579662 C11orf95C9JLR9 678 aaPredicted RBP18.04■□□□□ 0.48
ITGB4-206ENST00000579662 DHX8Q14562 1220 aaKnown RBP18.04■□□□□ 0.48
ITGB4-206ENST00000579662 FAM43AQ8N2R8 423 aa18.04■□□□□ 0.48
ITGB4-206ENST00000579662 AKAP2Q9Y2D5 859 aa18.04■□□□□ 0.48
ITGB4-206ENST00000579662 ZNF652Q9Y2D9 606 aa18.04■□□□□ 0.48
ITGB4-206ENST00000579662 PHF23Q9BUL5 403 aaPredicted RBP18.04■□□□□ 0.48
ITGB4-206ENST00000579662 FKBP4Q02790 459 aaKnown RBP eCLIP18.04■□□□□ 0.48
ITGB4-206ENST00000579662 PDRG1Q9NUG6 133 aa18.04■□□□□ 0.48
ITGB4-206ENST00000579662 MAP4K4O95819 1239 aaPredicted RBP18.03■□□□□ 0.48
ITGB4-206ENST00000579662 TNNT3P45378 269 aaPredicted RBP18.03■□□□□ 0.48
ITGB4-206ENST00000579662 FILIP1LQ4L180 1135 aa18.03■□□□□ 0.48
ITGB4-206ENST00000579662 FIBPO43427 364 aa18.03■□□□□ 0.48
ITGB4-206ENST00000579662 EMILIN1Q9Y6C2 1016 aa18.03■□□□□ 0.48
ITGB4-206ENST00000579662 ATP10BO94823 1461 aa18.03■□□□□ 0.48
ITGB4-206ENST00000579662 CTTNBP2Q8WZ74 1663 aa18.02■□□□□ 0.48
ITGB4-206ENST00000579662 TNRQ92752 1358 aa18.02■□□□□ 0.48
ITGB4-206ENST00000579662 SSH1Q8WYL5 1049 aa18.02■□□□□ 0.48
ITGB4-206ENST00000579662 PTPRCP08575 1304 aa18.02■□□□□ 0.48
ITGB4-206ENST00000579662 KRT85P78386 507 aa18.02■□□□□ 0.48
ITGB4-206ENST00000579662 ARGLU1Q9NWB6 273 aaPredicted RBP18.02■□□□□ 0.48
ITGB4-206ENST00000579662 CCP110O43303 1012 aa18.02■□□□□ 0.47
ITGB4-206ENST00000579662 GLRX3O76003 335 aaKnown RBP18.02■□□□□ 0.47
ITGB4-206ENST00000579662 MNS1Q8NEH6 495 aa18.02■□□□□ 0.47
ITGB4-206ENST00000579662 IL1RAPL2Q9NP60 686 aa18.02■□□□□ 0.47
ITGB4-206ENST00000579662 THUMPD2Q9BTF0 503 aaKnown RBP18.01■□□□□ 0.47
ITGB4-206ENST00000579662 TRIM5Q9C035 493 aa18.01■□□□□ 0.47
ITGB4-206ENST00000579662 MX1P20591 662 aa18.01■□□□□ 0.47
ITGB4-206ENST00000579662 DACH1Q9UI36 760 aa18.01■□□□□ 0.47
ITGB4-206ENST00000579662 RALGAPBQ86X10 1494 aa18.01■□□□□ 0.47
ITGB4-206ENST00000579662 ATP2B1P20020 1258 aa18.01■□□□□ 0.47
ITGB4-206ENST00000579662 NAP1L1P55209 391 aaKnown RBP18.01■□□□□ 0.47
ITGB4-206ENST00000579662 MAGEC2Q9UBF1 373 aaPredicted RBP18.01■□□□□ 0.47
ITGB4-206ENST00000579662 NOL7Q9UMY1 257 aaKnown RBP18.01■□□□□ 0.47
ITGB4-206ENST00000579662 R3HCC1Q9Y3T6 440 aaKnown RBP18.01■□□□□ 0.47
ITGB4-206ENST00000579662 KDM4AO75164 1064 aa18■□□□□ 0.47
ITGB4-206ENST00000579662 OFD1O75665 1012 aa18■□□□□ 0.47
ITGB4-206ENST00000579662 CWC27Q6UX04 472 aaKnown RBP18■□□□□ 0.47
ITGB4-206ENST00000579662 HSP90AB3PQ58FF7 597 aa18■□□□□ 0.47
ITGB4-206ENST00000579662 SMARCE1Q969G3 411 aa18■□□□□ 0.47
ITGB4-206ENST00000579662 HYPKQ9NX55 129 aa18■□□□□ 0.47
ITGB4-206ENST00000579662 DISP3Q9P2K9 1392 aa18■□□□□ 0.47
ITGB4-206ENST00000579662 IL16Q14005 1332 aa18■□□□□ 0.47
ITGB4-206ENST00000579662 JAKMIP1Q96N16 626 aaKnown RBP18■□□□□ 0.47
ITGB4-206ENST00000579662 MIS18AQ9NYP9 233 aa18■□□□□ 0.47
ITGB4-206ENST00000579662 LARP1BQ659C4 914 aaKnown RBP18■□□□□ 0.47
ITGB4-206ENST00000579662 PDILTQ8N807 584 aa18■□□□□ 0.47
ITGB4-206ENST00000579662 ZNF518AQ6AHZ1 1483 aa18■□□□□ 0.47
ITGB4-206ENST00000579662 ACBD3Q9H3P7 528 aa17.99■□□□□ 0.47
ITGB4-206ENST00000579662 NUP153P49790 1475 aaKnown RBP17.99■□□□□ 0.47
ITGB4-206ENST00000579662 TDO2P48775 406 aa17.99■□□□□ 0.47
ITGB4-206ENST00000579662 STK3Q13188 491 aa17.99■□□□□ 0.47
ITGB4-206ENST00000579662 CT47A1Q5JQC4 288 aaPredicted RBP17.99■□□□□ 0.47
ITGB4-206ENST00000579662 RNF214Q8ND24 703 aa17.99■□□□□ 0.47
ITGB4-206ENST00000579662 WASF1Q92558 559 aa17.99■□□□□ 0.47
ITGB4-206ENST00000579662 A2MP01023 1474 aa17.99■□□□□ 0.47
ITGB4-206ENST00000579662 ASXL2Q76L83 1435 aa17.99■□□□□ 0.47
ITGB4-206ENST00000579662 CCDC192P0DO97 292 aa17.98■□□□□ 0.47
ITGB4-206ENST00000579662 SOGA3Q5TF21 947 aa17.98■□□□□ 0.47
ITGB4-206ENST00000579662 CCAR1Q8IX12 1150 aaKnown RBP17.98■□□□□ 0.47
ITGB4-206ENST00000579662 UBAC1Q9BSL1 405 aa17.98■□□□□ 0.47
ITGB4-206ENST00000579662 RAI14Q9P0K7 980 aa17.98■□□□□ 0.47
ITGB4-206ENST00000579662 IMMTQ16891 758 aaKnown RBP17.98■□□□□ 0.47
ITGB4-206ENST00000579662 CCDC173Q0VFZ6 552 aa17.98■□□□□ 0.47
ITGB4-206ENST00000579662 DCTN1Q14203 1278 aa17.98■□□□□ 0.47
ITGB4-206ENST00000579662 PIP4K2BP78356 416 aa17.98■□□□□ 0.47
ITGB4-206ENST00000579662 FAM13BQ9NYF5 915 aa17.98■□□□□ 0.47
ITGB4-206ENST00000579662 DBF4Q9UBU7 674 aaPredicted RBP17.98■□□□□ 0.47
ITGB4-206ENST00000579662 SMC2O95347 1197 aa17.97■□□□□ 0.47
ITGB4-206ENST00000579662 TEX35Q5T0J7 233 aa17.97■□□□□ 0.47
ITGB4-206ENST00000579662 EXOC6BQ9Y2D4 811 aa17.97■□□□□ 0.47
ITGB4-206ENST00000579662 DNAAF4Q8WXU2 420 aa17.97■□□□□ 0.47
ITGB4-206ENST00000579662 WDR7Q9Y4E6 1490 aa17.97■□□□□ 0.47
ITGB4-206ENST00000579662 SYCP2Q9BX26 1530 aa17.97■□□□□ 0.47
ITGB4-206ENST00000579662 METTL24Q5JXM2 366 aa17.97■□□□□ 0.47
ITGB4-206ENST00000579662 CFAP45Q9UL16 551 aa17.97■□□□□ 0.47
ITGB4-206ENST00000579662 NUTM1Q86Y26 1132 aa17.97■□□□□ 0.47
ITGB4-206ENST00000579662 LRP2BPQ9P2M1 347 aa17.97■□□□□ 0.47
ITGB4-206ENST00000579662 ADAMTS12P58397 1594 aa17.96■□□□□ 0.47
ITGB4-206ENST00000579662 MYD88Q99836 296 aa17.96■□□□□ 0.47
ITGB4-206ENST00000579662 KRT18P05783 430 aaKnown RBP17.96■□□□□ 0.47
ITGB4-206ENST00000579662 CDR1P51861 262 aa17.96■□□□□ 0.47
ITGB4-206ENST00000579662 AIDAQ96BJ3 306 aa17.96■□□□□ 0.47
ITGB4-206ENST00000579662 KIAA0556O60303 1618 aa17.96■□□□□ 0.47
ITGB4-206ENST00000579662 EIF2AK4Q9P2K8 1649 aaKnown RBP17.96■□□□□ 0.47
ITGB4-206ENST00000579662 TTC21AQ8NDW8 1320 aa17.96■□□□□ 0.47
ITGB4-206ENST00000579662 FMNL2Q96PY5 1086 aa17.96■□□□□ 0.47
ITGB4-206ENST00000579662 ME1P48163 572 aa17.96■□□□□ 0.46
ITGB4-206ENST00000579662 USHBP1Q8N6Y0 703 aa17.96■□□□□ 0.46
ITGB4-206ENST00000579662 TCOF1Q13428 1488 aaKnown RBP17.95■□□□□ 0.46
ITGB4-206ENST00000579662 NUP133Q8WUM0 1156 aa17.95■□□□□ 0.46
ITGB4-206ENST00000579662 TNMDQ9H2S6 317 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms