RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 PMFBP1Q8TBY8 1022 aa4.93□□□□□ -1.62
CDH19-204ENST00000579658 MPHOSPH9Q99550 1183 aa4.93□□□□□ -1.62
CDH19-204ENST00000579658 POGKQ9P215 609 aa4.93□□□□□ -1.62
CDH19-204ENST00000579658 CCDC7Q96M83 1385 aa4.93□□□□□ -1.62
CDH19-204ENST00000579658 TNS2Q63HR2 1409 aa4.93□□□□□ -1.62
CDH19-204ENST00000579658 SLIT3O75094 1523 aa4.93□□□□□ -1.62
CDH19-204ENST00000579658 TOMM70O94826 608 aa4.93□□□□□ -1.62
CDH19-204ENST00000579658 LCE2DQ5TA82 110 aaPredicted RBP4.93□□□□□ -1.62
CDH19-204ENST00000579658 DNAJC5GQ8N7S2 189 aa4.93□□□□□ -1.62
CDH19-204ENST00000579658 KLRG1Q96E93 195 aa4.93□□□□□ -1.62
CDH19-204ENST00000579658 CD2APQ9Y5K6 639 aa4.93□□□□□ -1.62
CDH19-204ENST00000579658 BTAF1O14981 1849 aa4.93□□□□□ -1.62
CDH19-204ENST00000579658 COL18A1P39060 1754 aa4.92□□□□□ -1.62
CDH19-204ENST00000579658 PAK3O75914 559 aaPredicted RBP4.92□□□□□ -1.62
CDH19-204ENST00000579658 FSTL1Q12841 308 aa4.92□□□□□ -1.62
CDH19-204ENST00000579658 CHRNA2Q15822 529 aa4.92□□□□□ -1.62
CDH19-204ENST00000579658 NLRP13Q86W25 1043 aa4.92□□□□□ -1.62
CDH19-204ENST00000579658 RBM46Q8TBY0 533 aaKnown RBP4.92□□□□□ -1.62
CDH19-204ENST00000579658 PRAM1Q96QH2 718 aa4.92□□□□□ -1.62
CDH19-204ENST00000579658 TUBGCP6Q96RT7 1819 aa4.92□□□□□ -1.62
CDH19-204ENST00000579658 WASLO00401 505 aaPredicted RBP4.92□□□□□ -1.62
CDH19-204ENST00000579658 STAC3Q96MF2 364 aa4.92□□□□□ -1.62
CDH19-204ENST00000579658 USP35Q9P2H5 1018 aa4.92□□□□□ -1.62
CDH19-204ENST00000579658 FAM163AQ96GL9 167 aaPredicted RBP4.91□□□□□ -1.62
CDH19-204ENST00000579658 PDGFDQ9GZP0 370 aaPredicted RBP4.91□□□□□ -1.62
CDH19-204ENST00000579658 ADGRB1O14514 1584 aa4.91□□□□□ -1.62
CDH19-204ENST00000579658 LY75O60449 1722 aa4.91□□□□□ -1.62
CDH19-204ENST00000579658 WDR17Q8IZU2 1322 aa4.91□□□□□ -1.62
CDH19-204ENST00000579658 KIF3CO14782 793 aa4.91□□□□□ -1.62
CDH19-204ENST00000579658 ZC3H6P61129 1189 aaKnown RBP4.91□□□□□ -1.62
CDH19-204ENST00000579658 PLEKHG2Q9H7P9 1386 aa4.9□□□□□ -1.62
CDH19-204ENST00000579658 TNRC6CQ9HCJ0 1690 aaKnown RBP4.9□□□□□ -1.62
CDH19-204ENST00000579658 TMEM132EQ6IEE7 984 aa4.9□□□□□ -1.62
CDH19-204ENST00000579658 MARCH10Q8NA82 808 aaPredicted RBP4.9□□□□□ -1.62
CDH19-204ENST00000579658 FLAD1Q8NFF5 587 aa4.9□□□□□ -1.62
CDH19-204ENST00000579658 NSD3Q9BZ95 1437 aa4.9□□□□□ -1.63
CDH19-204ENST00000579658 PRR36Q9H6K5 1346 aa4.9□□□□□ -1.63
CDH19-204ENST00000579658 PLEKHG3A1L390 1219 aa4.9□□□□□ -1.63
CDH19-204ENST00000579658 EXOC5O00471 708 aa4.9□□□□□ -1.63
CDH19-204ENST00000579658 YBX3P16989 372 aaKnown RBP eCLIP4.9□□□□□ -1.63
CDH19-204ENST00000579658 COL13A1Q5TAT6 717 aaPredicted RBP4.9□□□□□ -1.63
CDH19-204ENST00000579658 CARD10Q9BWT7 1032 aa4.9□□□□□ -1.63
CDH19-204ENST00000579658 WWC3Q9ULE0 1092 aa4.9□□□□□ -1.63
CDH19-204ENST00000579658 FAM208AQ9UK61 1670 aaKnown RBP4.9□□□□□ -1.63
CDH19-204ENST00000579658 TOM1L2Q6ZVM7 507 aa4.89□□□□□ -1.63
CDH19-204ENST00000579658 USP6P35125 1406 aa4.89□□□□□ -1.63
CDH19-204ENST00000579658 GCP02774 474 aa4.89□□□□□ -1.63
CDH19-204ENST00000579658 CPSF1Q10570 1443 aaKnown RBP4.89□□□□□ -1.63
CDH19-204ENST00000579658 PPIP5K1Q6PFW1 1433 aa4.89□□□□□ -1.63
CDH19-204ENST00000579658 PNPLA7Q6ZV29 1317 aa4.88□□□□□ -1.63
CDH19-204ENST00000579658 RGL3Q3MIN7 710 aa4.88□□□□□ -1.63
CDH19-204ENST00000579658 C16orf71Q8IYS4 520 aaPredicted RBP4.88□□□□□ -1.63
CDH19-204ENST00000579658 ABTB2Q8N961 1025 aa4.88□□□□□ -1.63
CDH19-204ENST00000579658 NLGN2Q8NFZ4 835 aa4.88□□□□□ -1.63
CDH19-204ENST00000579658 SIN3AQ96ST3 1273 aa4.88□□□□□ -1.63
CDH19-204ENST00000579658 PXDNLA1KZ92 1463 aa4.88□□□□□ -1.63
CDH19-204ENST00000579658 NUDT16Q96DE0 195 aaKnown RBP4.88□□□□□ -1.63
CDH19-204ENST00000579658 USP54Q70EL1 1684 aa4.88□□□□□ -1.63
CDH19-204ENST00000579658 PKD1L3Q7Z443 1732 aa4.87□□□□□ -1.63
CDH19-204ENST00000579658 KIAA1210Q9ULL0 1709 aa4.87□□□□□ -1.63
CDH19-204ENST00000579658 ZNF827Q17R98 1081 aa4.87□□□□□ -1.63
CDH19-204ENST00000579658 KCNH5Q8NCM2 988 aa4.87□□□□□ -1.63
CDH19-204ENST00000579658 CCDC61Q9Y6R9 512 aa4.87□□□□□ -1.63
CDH19-204ENST00000579658 KIF13BQ9NQT8 1826 aa4.87□□□□□ -1.63
CDH19-204ENST00000579658 TFCP2L1Q9NZI6 479 aa4.87□□□□□ -1.63
CDH19-204ENST00000579658 ACEP12821 1306 aa4.86□□□□□ -1.63
CDH19-204ENST00000579658 PRDM10Q9NQV6 1147 aa4.86□□□□□ -1.63
CDH19-204ENST00000579658 C5P01031 1676 aa4.86□□□□□ -1.63
CDH19-204ENST00000579658 MINK1Q8N4C8 1332 aaPredicted RBP4.86□□□□□ -1.63
CDH19-204ENST00000579658 RGPD5Q99666 1765 aa4.86□□□□□ -1.63
CDH19-204ENST00000579658 CFAP70Q5T0N1 1121 aa4.86□□□□□ -1.63
CDH19-204ENST00000579658 KDM2BQ8NHM5 1336 aa4.86□□□□□ -1.63
CDH19-204ENST00000579658 ZC3H4Q9UPT8 1303 aaKnown RBP4.86□□□□□ -1.63
CDH19-204ENST00000579658 ARFGEF1Q9Y6D6 1849 aa4.85□□□□□ -1.63
CDH19-204ENST00000579658 BRPF1P55201 1214 aaPredicted RBP4.85□□□□□ -1.63
CDH19-204ENST00000579658 NEUROD1Q13562 356 aa4.85□□□□□ -1.63
CDH19-204ENST00000579658 SAFB2Q14151 953 aaKnown RBP eCLIP4.85□□□□□ -1.63
CDH19-204ENST00000579658 POLA2Q14181 598 aa4.85□□□□□ -1.63
CDH19-204ENST00000579658 SMC1BQ8NDV3 1235 aa4.85□□□□□ -1.63
CDH19-204ENST00000579658 HIRIP3Q9BW71 556 aaPredicted RBP4.85□□□□□ -1.63
CDH19-204ENST00000579658 HSPA1AP0DMV8 641 aaKnown RBP4.85□□□□□ -1.63
CDH19-204ENST00000579658 HSPA1BP0DMV9 641 aaKnown RBP4.85□□□□□ -1.63
CDH19-204ENST00000579658 PRKAR2AP13861 404 aaKnown RBP4.85□□□□□ -1.63
CDH19-204ENST00000579658 PTF1AQ7RTS3 328 aa4.85□□□□□ -1.63
CDH19-204ENST00000579658 ZNF526Q8TF50 670 aaPredicted RBP4.85□□□□□ -1.63
CDH19-204ENST00000579658 CSB-PGBD3P0DP91 1061 aa4.84□□□□□ -1.63
CDH19-204ENST00000579658 DOT1LQ8TEK3 1739 aa4.84□□□□□ -1.63
CDH19-204ENST00000579658 IGSF1Q8N6C5 1336 aa4.84□□□□□ -1.63
CDH19-204ENST00000579658 TAF1LQ8IZX4 1826 aa4.84□□□□□ -1.63
CDH19-204ENST00000579658 NFAT5O94916 1531 aa4.84□□□□□ -1.63
CDH19-204ENST00000579658 ANKRD36BQ8N2N9 1353 aa4.84□□□□□ -1.63
CDH19-204ENST00000579658 IL2RBP14784 551 aa4.84□□□□□ -1.64
CDH19-204ENST00000579658 NPM2Q86SE8 214 aaKnown RBP4.84□□□□□ -1.64
CDH19-204ENST00000579658 SPOCK2Q92563 424 aa4.84□□□□□ -1.64
CDH19-204ENST00000579658 TTC21AQ8NDW8 1320 aa4.84□□□□□ -1.64
CDH19-204ENST00000579658 ARHGEF25Q86VW2 580 aa4.83□□□□□ -1.64
CDH19-204ENST00000579658 CDK19Q9BWU1 502 aa4.83□□□□□ -1.64
CDH19-204ENST00000579658 LRRC4BQ9NT99 713 aa4.83□□□□□ -1.64
CDH19-204ENST00000579658 NKX1-1Q15270 411 aaPredicted RBP4.83□□□□□ -1.64
CDH19-204ENST00000579658 NUTM2GQ5VZR2 741 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms