RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 RPRD2Q5VT52 1461 aaKnown RBP12.26□□□□□ -0.45
MSI2-209ENST00000579483 USHBP1Q8N6Y0 703 aa12.26□□□□□ -0.45
MSI2-209ENST00000579483 NOB1Q9ULX3 412 aaKnown RBP12.26□□□□□ -0.45
MSI2-209ENST00000579483 EMILIN1Q9Y6C2 1016 aa12.26□□□□□ -0.45
MSI2-209ENST00000579483 TSR2Q969E8 191 aaKnown RBP12.25□□□□□ -0.45
MSI2-209ENST00000579483 SMC3Q9UQE7 1217 aa12.25□□□□□ -0.45
MSI2-209ENST00000579483 ZFYVE16Q7Z3T8 1539 aa12.25□□□□□ -0.45
MSI2-209ENST00000579483 SRGAP3O43295 1099 aa12.25□□□□□ -0.45
MSI2-209ENST00000579483 PANK1Q8TE04 598 aa12.25□□□□□ -0.45
MSI2-209ENST00000579483 ANKRD18BA2A2Z9 1011 aa12.25□□□□□ -0.45
MSI2-209ENST00000579483 ATP2B2Q01814 1243 aa12.25□□□□□ -0.45
MSI2-209ENST00000579483 PES1O00541 588 aaKnown RBP12.24□□□□□ -0.45
MSI2-209ENST00000579483 MSNP26038 577 aaKnown RBP12.24□□□□□ -0.45
MSI2-209ENST00000579483 PPIP5K1Q6PFW1 1433 aa12.24□□□□□ -0.45
MSI2-209ENST00000579483 KRI1Q8N9T8 703 aaKnown RBP12.24□□□□□ -0.45
MSI2-209ENST00000579483 ARHGEF10O15013 1369 aa12.24□□□□□ -0.45
MSI2-209ENST00000579483 SAMD9Q5K651 1589 aa12.24□□□□□ -0.45
MSI2-209ENST00000579483 SLC5A1P13866 664 aa12.24□□□□□ -0.45
MSI2-209ENST00000579483 LDHCP07864 332 aa12.23□□□□□ -0.45
MSI2-209ENST00000579483 DDX11L8A8MPP1 907 aa12.23□□□□□ -0.45
MSI2-209ENST00000579483 SIL1Q9H173 461 aa12.23□□□□□ -0.45
MSI2-209ENST00000579483 STK32BQ9NY57 414 aa12.23□□□□□ -0.45
MSI2-209ENST00000579483 CHD1O14646 1710 aa12.23□□□□□ -0.45
MSI2-209ENST00000579483 ALDH1L2Q3SY69 923 aa12.23□□□□□ -0.45
MSI2-209ENST00000579483 MCM10Q7L590 875 aa12.23□□□□□ -0.45
MSI2-209ENST00000579483 NOC3LQ8WTT2 800 aaKnown RBP12.22□□□□□ -0.45
MSI2-209ENST00000579483 DISP1Q96F81 1524 aa12.22□□□□□ -0.45
MSI2-209ENST00000579483 MCM2P49736 904 aa12.22□□□□□ -0.45
MSI2-209ENST00000579483 RRP12Q5JTH9 1297 aaKnown RBP12.22□□□□□ -0.45
MSI2-209ENST00000579483 TRIM22Q8IYM9 498 aa12.22□□□□□ -0.45
MSI2-209ENST00000579483 DNAJC5Q9H3Z4 198 aa12.22□□□□□ -0.45
MSI2-209ENST00000579483 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.22□□□□□ -0.45
MSI2-209ENST00000579483 ATP7AQ04656 1500 aa12.22□□□□□ -0.45
MSI2-209ENST00000579483 GLIPR1L2Q4G1C9 344 aa12.22□□□□□ -0.45
MSI2-209ENST00000579483 SOGA3Q5TF21 947 aa12.22□□□□□ -0.45
MSI2-209ENST00000579483 NBPF6Q5VWK0 638 aa12.22□□□□□ -0.45
MSI2-209ENST00000579483 NBPF5PQ86XG9 351 aaPredicted RBP12.22□□□□□ -0.45
MSI2-209ENST00000579483 NBPF4Q96M43 638 aa12.22□□□□□ -0.45
MSI2-209ENST00000579483 MYD88Q99836 296 aa12.22□□□□□ -0.45
MSI2-209ENST00000579483 RAB11FIP3O75154 756 aa12.22□□□□□ -0.45
MSI2-209ENST00000579483 NYXQ9GZU5 481 aa12.22□□□□□ -0.45
MSI2-209ENST00000579483 MAGI2Q86UL8 1455 aa12.21□□□□□ -0.45
MSI2-209ENST00000579483 BECN2A8MW95 431 aa12.21□□□□□ -0.45
MSI2-209ENST00000579483 GOLGA6L19H0YKK7 550 aa12.21□□□□□ -0.45
MSI2-209ENST00000579483 C6orf229H3BNL8 230 aa12.21□□□□□ -0.45
MSI2-209ENST00000579483 FKBP4Q02790 459 aaKnown RBP eCLIP12.21□□□□□ -0.45
MSI2-209ENST00000579483 AACSQ86V21 672 aa12.21□□□□□ -0.45
MSI2-209ENST00000579483 PDCP20941 246 aa12.21□□□□□ -0.45
MSI2-209ENST00000579483 TDO2P48775 406 aa12.21□□□□□ -0.45
MSI2-209ENST00000579483 TTLL12Q14166 644 aaPredicted RBP12.21□□□□□ -0.45
MSI2-209ENST00000579483 CRACR2BQ8N4Y2 399 aaPredicted RBP12.21□□□□□ -0.45
MSI2-209ENST00000579483 ZNF622Q969S3 477 aaKnown RBP eCLIP12.21□□□□□ -0.45
MSI2-209ENST00000579483 SETDB2Q96T68 719 aa12.21□□□□□ -0.45
MSI2-209ENST00000579483 MYO1BO43795 1136 aa12.21□□□□□ -0.46
MSI2-209ENST00000579483 ATP6V1AP38606 617 aa12.21□□□□□ -0.46
MSI2-209ENST00000579483 ANKRD1Q15327 319 aa12.21□□□□□ -0.46
MSI2-209ENST00000579483 MTMR7Q9Y216 660 aa12.21□□□□□ -0.46
MSI2-209ENST00000579483 SKOR2Q2VWA4 1001 aaPredicted RBP12.21□□□□□ -0.46
MSI2-209ENST00000579483 DNAAF4Q8WXU2 420 aa12.21□□□□□ -0.46
MSI2-209ENST00000579483 CLASP1Q7Z460 1538 aa12.2□□□□□ -0.46
MSI2-209ENST00000579483 TXLNAP40222 546 aa12.2□□□□□ -0.46
MSI2-209ENST00000579483 PAXIP1Q6ZW49 1069 aaPredicted RBP12.2□□□□□ -0.46
MSI2-209ENST00000579483 DZIP1Q86YF9 867 aaKnown RBP12.2□□□□□ -0.46
MSI2-209ENST00000579483 PRM3Q9NNZ6 103 aa12.2□□□□□ -0.46
MSI2-209ENST00000579483 SLAIN2Q9P270 581 aa12.2□□□□□ -0.46
MSI2-209ENST00000579483 ARAP3Q8WWN8 1544 aa12.2□□□□□ -0.46
MSI2-209ENST00000579483 SLC4A3P48751 1232 aa12.2□□□□□ -0.46
MSI2-209ENST00000579483 AKAP4Q5JQC9 854 aa12.2□□□□□ -0.46
MSI2-209ENST00000579483 SPTY2D1Q68D10 685 aaPredicted RBP12.2□□□□□ -0.46
MSI2-209ENST00000579483 RTCBQ9Y3I0 505 aaKnown RBP12.2□□□□□ -0.46
MSI2-209ENST00000579483 PARP3Q9Y6F1 533 aa12.2□□□□□ -0.46
MSI2-209ENST00000579483 CWC25Q9NXE8 425 aaPredicted RBP12.2□□□□□ -0.46
MSI2-209ENST00000579483 TFCP2L1Q9NZI6 479 aa12.2□□□□□ -0.46
MSI2-209ENST00000579483 TCOF1Q13428 1488 aaKnown RBP12.2□□□□□ -0.46
MSI2-209ENST00000579483 FLT4P35916 1363 aa12.2□□□□□ -0.46
MSI2-209ENST00000579483 IPO7O95373 1038 aaKnown RBP12.2□□□□□ -0.46
MSI2-209ENST00000579483 GCP02774 474 aa12.2□□□□□ -0.46
MSI2-209ENST00000579483 BAG6P46379 1132 aa12.19□□□□□ -0.46
MSI2-209ENST00000579483 AIDAQ96BJ3 306 aa12.19□□□□□ -0.46
MSI2-209ENST00000579483 KIF1BPQ96EK5 621 aa12.19□□□□□ -0.46
MSI2-209ENST00000579483 UBAC1Q9BSL1 405 aa12.19□□□□□ -0.46
MSI2-209ENST00000579483 ABCF2Q9UG63 623 aa12.19□□□□□ -0.46
MSI2-209ENST00000579483 MAP3K12Q12852 859 aa12.19□□□□□ -0.46
MSI2-209ENST00000579483 TMEM132AQ24JP5 1023 aa12.19□□□□□ -0.46
MSI2-209ENST00000579483 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
MSI2-209ENST00000579483 CCDC152Q4G0S7 254 aa12.19□□□□□ -0.46
MSI2-209ENST00000579483 HDAC9Q9UKV0 1011 aa12.19□□□□□ -0.46
MSI2-209ENST00000579483 CCDC69A6NI79 296 aa12.19□□□□□ -0.46
MSI2-209ENST00000579483 NUCB2P80303 420 aa12.19□□□□□ -0.46
MSI2-209ENST00000579483 CCDC73Q6ZRK6 1079 aa12.19□□□□□ -0.46
MSI2-209ENST00000579483 C16orf71Q8IYS4 520 aaPredicted RBP12.19□□□□□ -0.46
MSI2-209ENST00000579483 CDK5RAP3Q96JB5 506 aa12.19□□□□□ -0.46
MSI2-209ENST00000579483 PCDH11XQ9BZA7 1347 aa12.19□□□□□ -0.46
MSI2-209ENST00000579483 PCDH11YQ9BZA8 1340 aa12.19□□□□□ -0.46
MSI2-209ENST00000579483 USP5P45974 858 aa12.18□□□□□ -0.46
MSI2-209ENST00000579483 KRT32Q14532 448 aa12.18□□□□□ -0.46
MSI2-209ENST00000579483 PTPRCP08575 1304 aa12.18□□□□□ -0.46
MSI2-209ENST00000579483 CDKL5O76039 1030 aa12.18□□□□□ -0.46
MSI2-209ENST00000579483 MVPQ14764 893 aaKnown RBP12.18□□□□□ -0.46
MSI2-209ENST00000579483 NLRP3Q96P20 1036 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms