RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 FCHSD2O94868 740 aa20.75■□□□□ 0.91
SLC6A4-205ENST00000579221 AMOTQ4VCS5 1084 aa20.75■□□□□ 0.91
SLC6A4-205ENST00000579221 DDX54Q8TDD1 881 aaKnown RBP20.75■□□□□ 0.91
SLC6A4-205ENST00000579221 MEGF6O75095 1541 aa20.74■□□□□ 0.91
SLC6A4-205ENST00000579221 OVOS2A0A0G2JMS6 1433 aa20.74■□□□□ 0.91
SLC6A4-205ENST00000579221 WDR43Q15061 677 aaKnown RBP eCLIP20.74■□□□□ 0.91
SLC6A4-205ENST00000579221 PNNQ9H307 717 aaKnown RBP20.74■□□□□ 0.91
SLC6A4-205ENST00000579221 MARCH10Q8NA82 808 aaPredicted RBP20.73■□□□□ 0.91
SLC6A4-205ENST00000579221 MRS2Q9HD23 443 aa20.73■□□□□ 0.91
SLC6A4-205ENST00000579221 PLEKHG2Q9H7P9 1386 aa20.72■□□□□ 0.91
SLC6A4-205ENST00000579221 RGPD1P0DJD0 1748 aa20.72■□□□□ 0.91
SLC6A4-205ENST00000579221 PARP4Q9UKK3 1724 aaKnown RBP20.71■□□□□ 0.91
SLC6A4-205ENST00000579221 CCDC184Q52MB2 194 aa20.71■□□□□ 0.91
SLC6A4-205ENST00000579221 FAM196AQ6ZSG2 479 aa20.71■□□□□ 0.91
SLC6A4-205ENST00000579221 RSPH6AQ9H0K4 717 aa20.71■□□□□ 0.91
SLC6A4-205ENST00000579221 TNS2Q63HR2 1409 aa20.7■□□□□ 0.9
SLC6A4-205ENST00000579221 NEFMP07197 916 aa20.7■□□□□ 0.9
SLC6A4-205ENST00000579221 PRKAR2BP31323 418 aa20.7■□□□□ 0.9
SLC6A4-205ENST00000579221 FAM182BQ5T319 152 aa20.7■□□□□ 0.9
SLC6A4-205ENST00000579221 PCDH11XQ9BZA7 1347 aa20.7■□□□□ 0.9
SLC6A4-205ENST00000579221 PCDH11YQ9BZA8 1340 aa20.7■□□□□ 0.9
SLC6A4-205ENST00000579221 WNK3Q9BYP7 1800 aa20.69■□□□□ 0.9
SLC6A4-205ENST00000579221 IFNL2Q8IZJ0 200 aa20.68■□□□□ 0.9
SLC6A4-205ENST00000579221 LRRC37A3O60309 1634 aa20.67■□□□□ 0.9
SLC6A4-205ENST00000579221 ZNF530Q6P9A1 599 aaPredicted RBP20.67■□□□□ 0.9
SLC6A4-205ENST00000579221 ADAMTS8Q9UP79 889 aa20.67■□□□□ 0.9
SLC6A4-205ENST00000579221 CCER2I3L3R5 266 aa20.66■□□□□ 0.9
SLC6A4-205ENST00000579221 CYP27B1O15528 508 aa20.66■□□□□ 0.9
SLC6A4-205ENST00000579221 C1orf141Q5JVX7 400 aa20.66■□□□□ 0.9
SLC6A4-205ENST00000579221 BRWD3Q6RI45 1802 aa20.66■□□□□ 0.9
SLC6A4-205ENST00000579221 PHKG2P15735 406 aa20.65■□□□□ 0.9
SLC6A4-205ENST00000579221 MTHFSDQ2M296 383 aaKnown RBP20.65■□□□□ 0.9
SLC6A4-205ENST00000579221 MIER1Q8N108 512 aa20.65■□□□□ 0.9
SLC6A4-205ENST00000579221 GAS2L2Q8NHY3 880 aa20.65■□□□□ 0.9
SLC6A4-205ENST00000579221 PNISRQ8TF01 805 aaKnown RBP20.65■□□□□ 0.9
SLC6A4-205ENST00000579221 HSP90AB1P08238 724 aaKnown RBP20.64■□□□□ 0.89
SLC6A4-205ENST00000579221 NKX1-1Q15270 411 aaPredicted RBP20.64■□□□□ 0.89
SLC6A4-205ENST00000579221 PHACTR3Q96KR7 559 aa20.64■□□□□ 0.89
SLC6A4-205ENST00000579221 PLEKHF1Q96S99 279 aa20.64■□□□□ 0.89
SLC6A4-205ENST00000579221 AKAP4Q5JQC9 854 aa20.63■□□□□ 0.89
SLC6A4-205ENST00000579221 BCL9O00512 1426 aa20.62■□□□□ 0.89
SLC6A4-205ENST00000579221 MAPK8IP3Q9UPT6 1336 aa20.62■□□□□ 0.89
SLC6A4-205ENST00000579221 CCDC125Q86Z20 511 aa20.61■□□□□ 0.89
SLC6A4-205ENST00000579221 RUNDC1Q96C34 613 aa20.61■□□□□ 0.89
SLC6A4-205ENST00000579221 DCAF5Q96JK2 942 aa20.6■□□□□ 0.89
SLC6A4-205ENST00000579221 PKD1L3Q7Z443 1732 aa20.59■□□□□ 0.89
SLC6A4-205ENST00000579221 TRIM37O94972 964 aa20.59■□□□□ 0.89
SLC6A4-205ENST00000579221 SF3B2Q13435 895 aaKnown RBP20.59■□□□□ 0.89
SLC6A4-205ENST00000579221 CCDC146Q8IYE0 955 aa20.59■□□□□ 0.89
SLC6A4-205ENST00000579221 ACSBG1Q96GR2 724 aa20.59■□□□□ 0.89
SLC6A4-205ENST00000579221 GNAT3A8MTJ3 354 aa20.58■□□□□ 0.89
SLC6A4-205ENST00000579221 FAM9BQ8IZU0 186 aa20.58■□□□□ 0.89
SLC6A4-205ENST00000579221 PRIM1P49642 420 aaKnown RBP20.57■□□□□ 0.88
SLC6A4-205ENST00000579221 UPF1Q92900 1129 aaKnown RBP eCLIP20.57■□□□□ 0.88
SLC6A4-205ENST00000579221 BCL11BQ9C0K0 894 aaPredicted RBP20.57■□□□□ 0.88
SLC6A4-205ENST00000579221 NFE2L2Q16236 605 aa20.56■□□□□ 0.88
SLC6A4-205ENST00000579221 MPRIPQ6WCQ1 1025 aa20.56■□□□□ 0.88
SLC6A4-205ENST00000579221 SYTL4Q96C24 671 aaPredicted RBP20.56■□□□□ 0.88
SLC6A4-205ENST00000579221 ERVV-2B6SEH9 535 aa20.55■□□□□ 0.88
SLC6A4-205ENST00000579221 KCNQ2O43526 872 aa20.55■□□□□ 0.88
SLC6A4-205ENST00000579221 HTATSF1O43719 755 aaKnown RBP20.55■□□□□ 0.88
SLC6A4-205ENST00000579221 RTF1Q92541 710 aaKnown RBP20.55■□□□□ 0.88
SLC6A4-205ENST00000579221 SHANK3Q9BYB0 1731 aa20.55■□□□□ 0.88
SLC6A4-205ENST00000579221 RNMTO43148 476 aaKnown RBP20.54■□□□□ 0.88
SLC6A4-205ENST00000579221 MAP3K5Q99683 1374 aa20.54■□□□□ 0.88
SLC6A4-205ENST00000579221 APBA3O96018 575 aa20.53■□□□□ 0.88
SLC6A4-205ENST00000579221 TMPOP42166 694 aaKnown RBP20.53■□□□□ 0.88
SLC6A4-205ENST00000579221 LGR6Q9HBX8 967 aa20.53■□□□□ 0.88
SLC6A4-205ENST00000579221 SOCS7O14512 581 aa20.52■□□□□ 0.88
SLC6A4-205ENST00000579221 RIPK4P57078 832 aa20.52■□□□□ 0.88
SLC6A4-205ENST00000579221 CABP4P57796 275 aa20.52■□□□□ 0.88
SLC6A4-205ENST00000579221 PTF1AQ7RTS3 328 aa20.51■□□□□ 0.87
SLC6A4-205ENST00000579221 IL17REQ8NFR9 667 aa20.51■□□□□ 0.87
SLC6A4-205ENST00000579221 TMOD3Q9NYL9 352 aa20.51■□□□□ 0.87
SLC6A4-205ENST00000579221 APAF1O14727 1248 aa20.5■□□□□ 0.87
SLC6A4-205ENST00000579221 NEUROD2Q15784 382 aa20.5■□□□□ 0.87
SLC6A4-205ENST00000579221 BAG6P46379 1132 aa20.49■□□□□ 0.87
SLC6A4-205ENST00000579221 LMOD3Q0VAK6 560 aa20.49■□□□□ 0.87
SLC6A4-205ENST00000579221 PIGBQ92521 554 aa20.49■□□□□ 0.87
SLC6A4-205ENST00000579221 KDM6AO15550 1401 aaPredicted RBP20.49■□□□□ 0.87
SLC6A4-205ENST00000579221 TEFQ10587 303 aa20.48■□□□□ 0.87
SLC6A4-205ENST00000579221 NFATC2IPQ8NCF5 419 aa20.48■□□□□ 0.87
SLC6A4-205ENST00000579221 SLC52A2Q9HAB3 445 aa20.48■□□□□ 0.87
SLC6A4-205ENST00000579221 RRP7AQ9Y3A4 280 aaKnown RBP20.48■□□□□ 0.87
SLC6A4-205ENST00000579221 PLSCR1O15162 318 aa20.47■□□□□ 0.87
SLC6A4-205ENST00000579221 MCM10Q7L590 875 aa20.47■□□□□ 0.87
SLC6A4-205ENST00000579221 DCTN1Q14203 1278 aa20.46■□□□□ 0.87
SLC6A4-205ENST00000579221 SMARCC1Q92922 1105 aaPredicted RBP20.45■□□□□ 0.86
SLC6A4-205ENST00000579221 SBF2Q86WG5 1849 aa20.44■□□□□ 0.86
SLC6A4-205ENST00000579221 NHSQ6T4R5 1651 aa20.44■□□□□ 0.86
SLC6A4-205ENST00000579221 CEMIPQ8WUJ3 1361 aa20.44■□□□□ 0.86
SLC6A4-205ENST00000579221 EN1Q05925 392 aaPredicted RBP20.43■□□□□ 0.86
SLC6A4-205ENST00000579221 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
SLC6A4-205ENST00000579221 DEFB132Q7Z7B7 95 aa20.43■□□□□ 0.86
SLC6A4-205ENST00000579221 DOT1LQ8TEK3 1739 aa20.43■□□□□ 0.86
SLC6A4-205ENST00000579221 CAMKK2Q96RR4 588 aa20.42■□□□□ 0.86
SLC6A4-205ENST00000579221 TRIM35Q9UPQ4 493 aa20.42■□□□□ 0.86
SLC6A4-205ENST00000579221 TAF7Q15545 349 aaPredicted RBP20.41■□□□□ 0.86
SLC6A4-205ENST00000579221 NGEFQ8N5V2 710 aa20.41■□□□□ 0.86
SLC6A4-205ENST00000579221 ATG3Q9NT62 314 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms