RNA–Protein interactions for RNA: ENST00000579214.1

TTC39C-206, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-206ENST00000579214 NEUROD2Q15784 382 aa12.82□□□□□ -0.36
TTC39C-206ENST00000579214 ZNF772Q68DY9 489 aaPredicted RBP12.82□□□□□ -0.36
TTC39C-206ENST00000579214 QTRT2Q9H974 415 aaKnown RBP12.82□□□□□ -0.36
TTC39C-206ENST00000579214 PARP4Q9UKK3 1724 aaKnown RBP12.82□□□□□ -0.36
TTC39C-206ENST00000579214 APAF1O14727 1248 aa12.81□□□□□ -0.36
TTC39C-206ENST00000579214 FAM98CQ17RN3 349 aaKnown RBP12.81□□□□□ -0.36
TTC39C-206ENST00000579214 PLEKHO1Q53GL0 409 aaPredicted RBP12.81□□□□□ -0.36
TTC39C-206ENST00000579214 PHACTR3Q96KR7 559 aa12.81□□□□□ -0.36
TTC39C-206ENST00000579214 PLEKHF1Q96S99 279 aa12.81□□□□□ -0.36
TTC39C-206ENST00000579214 ZNF530Q6P9A1 599 aaPredicted RBP12.8□□□□□ -0.36
TTC39C-206ENST00000579214 THRAP3Q9Y2W1 955 aaKnown RBP12.8□□□□□ -0.36
TTC39C-206ENST00000579214 WNK3Q9BYP7 1800 aa12.8□□□□□ -0.36
TTC39C-206ENST00000579214 OVOS2A0A0G2JMS6 1433 aa12.79□□□□□ -0.36
TTC39C-206ENST00000579214 GAS2L2Q8NHY3 880 aa12.79□□□□□ -0.36
TTC39C-206ENST00000579214 GJD4Q96KN9 370 aaPredicted RBP12.79□□□□□ -0.36
TTC39C-206ENST00000579214 SPG7Q9UQ90 795 aa12.79□□□□□ -0.36
TTC39C-206ENST00000579214 GLI3P10071 1580 aa12.78□□□□□ -0.36
TTC39C-206ENST00000579214 TMPOP42166 694 aaKnown RBP12.78□□□□□ -0.36
TTC39C-206ENST00000579214 NFE2L2Q16236 605 aa12.78□□□□□ -0.36
TTC39C-206ENST00000579214 MTHFSDQ2M296 383 aaKnown RBP12.78□□□□□ -0.36
TTC39C-206ENST00000579214 AMOTQ4VCS5 1084 aa12.78□□□□□ -0.36
TTC39C-206ENST00000579214 C1orf141Q5JVX7 400 aa12.78□□□□□ -0.36
TTC39C-206ENST00000579214 DISP2A7MBM2 1401 aa12.78□□□□□ -0.36
TTC39C-206ENST00000579214 RIPK4P57078 832 aa12.77□□□□□ -0.37
TTC39C-206ENST00000579214 BARGINQ6ZT62 677 aa12.77□□□□□ -0.37
TTC39C-206ENST00000579214 ZCRB1Q8TBF4 217 aaKnown RBP12.77□□□□□ -0.37
TTC39C-206ENST00000579214 DDX54Q8TDD1 881 aaKnown RBP12.77□□□□□ -0.37
TTC39C-206ENST00000579214 CDCA7Q9BWT1 371 aaPredicted RBP12.77□□□□□ -0.37
TTC39C-206ENST00000579214 PCDH11XQ9BZA7 1347 aa12.76□□□□□ -0.37
TTC39C-206ENST00000579214 PCDH11YQ9BZA8 1340 aa12.76□□□□□ -0.37
TTC39C-206ENST00000579214 TNS2Q63HR2 1409 aa12.76□□□□□ -0.37
TTC39C-206ENST00000579214 PKD1L3Q7Z443 1732 aa12.76□□□□□ -0.37
TTC39C-206ENST00000579214 EXOC5O00471 708 aa12.75□□□□□ -0.37
TTC39C-206ENST00000579214 LRRC37A3O60309 1634 aa12.75□□□□□ -0.37
TTC39C-206ENST00000579214 LMOD3Q0VAK6 560 aa12.75□□□□□ -0.37
TTC39C-206ENST00000579214 DDB1Q16531 1140 aa12.75□□□□□ -0.37
TTC39C-206ENST00000579214 RTF1Q92541 710 aaKnown RBP12.75□□□□□ -0.37
TTC39C-206ENST00000579214 MAP3K5Q99683 1374 aa12.75□□□□□ -0.37
TTC39C-206ENST00000579214 DLG5Q8TDM6 1919 aa12.74□□□□□ -0.37
TTC39C-206ENST00000579214 RBM6P78332 1123 aaKnown RBP12.74□□□□□ -0.37
TTC39C-206ENST00000579214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.74□□□□□ -0.37
TTC39C-206ENST00000579214 PLEKHG2Q9H7P9 1386 aa12.73□□□□□ -0.37
TTC39C-206ENST00000579214 GNAT3A8MTJ3 354 aa12.73□□□□□ -0.37
TTC39C-206ENST00000579214 RXRBP28702 533 aa12.73□□□□□ -0.37
TTC39C-206ENST00000579214 PDE3BQ13370 1112 aa12.73□□□□□ -0.37
TTC39C-206ENST00000579214 DCTN1Q14203 1278 aa12.73□□□□□ -0.37
TTC39C-206ENST00000579214 AKAP4Q5JQC9 854 aa12.73□□□□□ -0.37
TTC39C-206ENST00000579214 SEPT12Q8IYM1 358 aa12.73□□□□□ -0.37
TTC39C-206ENST00000579214 IFNL2Q8IZJ0 200 aa12.73□□□□□ -0.37
TTC39C-206ENST00000579214 THUMPD2Q9BTF0 503 aaKnown RBP12.73□□□□□ -0.37
TTC39C-206ENST00000579214 RGS17Q9UGC6 210 aaPredicted RBP12.73□□□□□ -0.37
TTC39C-206ENST00000579214 THSD7AQ9UPZ6 1657 aa12.73□□□□□ -0.37
TTC39C-206ENST00000579214 SHANK3Q9BYB0 1731 aa12.72□□□□□ -0.37
TTC39C-206ENST00000579214 CYP27B1O15528 508 aa12.72□□□□□ -0.37
TTC39C-206ENST00000579214 PHKG2P15735 406 aa12.72□□□□□ -0.37
TTC39C-206ENST00000579214 POTEAQ6S8J7 498 aa12.72□□□□□ -0.37
TTC39C-206ENST00000579214 MPRIPQ6WCQ1 1025 aa12.72□□□□□ -0.37
TTC39C-206ENST00000579214 MCM10Q7L590 875 aa12.72□□□□□ -0.37
TTC39C-206ENST00000579214 HSP90AB1P08238 724 aaKnown RBP12.71□□□□□ -0.37
TTC39C-206ENST00000579214 NGEFQ8N5V2 710 aa12.71□□□□□ -0.37
TTC39C-206ENST00000579214 KAT6BQ8WYB5 2073 aa12.71□□□□□ -0.38
TTC39C-206ENST00000579214 ZBED9Q6R2W3 1325 aa12.7□□□□□ -0.38
TTC39C-206ENST00000579214 TRIM35Q9UPQ4 493 aa12.7□□□□□ -0.38
TTC39C-206ENST00000579214 LAS1LQ9Y4W2 734 aaKnown RBP12.7□□□□□ -0.38
TTC39C-206ENST00000579214 RNMTO43148 476 aaKnown RBP12.69□□□□□ -0.38
TTC39C-206ENST00000579214 WWC1Q8IX03 1113 aa12.69□□□□□ -0.38
TTC39C-206ENST00000579214 HTATSF1O43719 755 aaKnown RBP12.68□□□□□ -0.38
TTC39C-206ENST00000579214 CALD1Q05682 793 aaKnown RBP12.68□□□□□ -0.38
TTC39C-206ENST00000579214 TEFQ10587 303 aa12.68□□□□□ -0.38
TTC39C-206ENST00000579214 CCDC27Q2M243 656 aa12.68□□□□□ -0.38
TTC39C-206ENST00000579214 MARCH10Q8NA82 808 aaPredicted RBP12.68□□□□□ -0.38
TTC39C-206ENST00000579214 DCAF5Q96JK2 942 aa12.68□□□□□ -0.38
TTC39C-206ENST00000579214 LGR6Q9HBX8 967 aa12.68□□□□□ -0.38
TTC39C-206ENST00000579214 RGS12O14924 1447 aa12.68□□□□□ -0.38
TTC39C-206ENST00000579214 KDM6AO15550 1401 aaPredicted RBP12.68□□□□□ -0.38
TTC39C-206ENST00000579214 VIRMAQ69YN4 1812 aaKnown RBP12.67□□□□□ -0.38
TTC39C-206ENST00000579214 FAM182BQ5T319 152 aa12.67□□□□□ -0.38
TTC39C-206ENST00000579214 IL17REQ8NFR9 667 aa12.67□□□□□ -0.38
TTC39C-206ENST00000579214 SYTL4Q96C24 671 aaPredicted RBP12.67□□□□□ -0.38
TTC39C-206ENST00000579214 ACSBG1Q96GR2 724 aa12.67□□□□□ -0.38
TTC39C-206ENST00000579214 BRWD3Q6RI45 1802 aa12.67□□□□□ -0.38
TTC39C-206ENST00000579214 SCN11AQ9UI33 1791 aa12.66□□□□□ -0.38
TTC39C-206ENST00000579214 ONECUT3O60422 494 aaPredicted RBP12.66□□□□□ -0.38
TTC39C-206ENST00000579214 CABP4P57796 275 aa12.66□□□□□ -0.38
TTC39C-206ENST00000579214 GOLGA2Q08379 1002 aa12.66□□□□□ -0.38
TTC39C-206ENST00000579214 KRT27Q7Z3Y8 459 aa12.66□□□□□ -0.38
TTC39C-206ENST00000579214 DOT1LQ8TEK3 1739 aa12.65□□□□□ -0.38
TTC39C-206ENST00000579214 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
TTC39C-206ENST00000579214 WDR63Q8IWG1 891 aa12.65□□□□□ -0.38
TTC39C-206ENST00000579214 TOGARAM1Q9Y4F4 1720 aa12.65□□□□□ -0.38
TTC39C-206ENST00000579214 ZNF521Q96K83 1311 aa12.64□□□□□ -0.39
TTC39C-206ENST00000579214 NKX1-1Q15270 411 aaPredicted RBP12.64□□□□□ -0.39
TTC39C-206ENST00000579214 CDCA7LQ96GN5 454 aa12.64□□□□□ -0.39
TTC39C-206ENST00000579214 SLC52A2Q9HAB3 445 aa12.64□□□□□ -0.39
TTC39C-206ENST00000579214 TMOD3Q9NYL9 352 aa12.64□□□□□ -0.39
TTC39C-206ENST00000579214 TSPYL4Q9UJ04 414 aa12.64□□□□□ -0.39
TTC39C-206ENST00000579214 CEMIPQ8WUJ3 1361 aa12.64□□□□□ -0.39
TTC39C-206ENST00000579214 E9PSI1 815 aa12.63□□□□□ -0.39
TTC39C-206ENST00000579214 GNAI1P63096 354 aa12.63□□□□□ -0.39
TTC39C-206ENST00000579214 TSR2Q969E8 191 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms