RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 FAM208AQ9UK61 1670 aaKnown RBP12.49□□□□□ -0.41
BRIP1-204ENST00000579028 CD163L1Q9NR16 1453 aa12.49□□□□□ -0.41
BRIP1-204ENST00000579028 SBNO2Q9Y2G9 1366 aa12.49□□□□□ -0.41
BRIP1-204ENST00000579028 NME9Q86XW9 330 aa12.49□□□□□ -0.41
BRIP1-204ENST00000579028 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.49□□□□□ -0.41
BRIP1-204ENST00000579028 ANKRD36BQ8N2N9 1353 aa12.48□□□□□ -0.41
BRIP1-204ENST00000579028 L3MBTL2Q969R5 705 aa12.48□□□□□ -0.41
BRIP1-204ENST00000579028 DOT1LQ8TEK3 1739 aa12.48□□□□□ -0.41
BRIP1-204ENST00000579028 ATP10DQ9P241 1426 aa12.47□□□□□ -0.41
BRIP1-204ENST00000579028 NSD2O96028 1365 aa12.47□□□□□ -0.41
BRIP1-204ENST00000579028 KCNQ4P56696 695 aa12.47□□□□□ -0.41
BRIP1-204ENST00000579028 DDX54Q8TDD1 881 aaKnown RBP12.47□□□□□ -0.41
BRIP1-204ENST00000579028 ROCK2O75116 1388 aaKnown RBP12.46□□□□□ -0.41
BRIP1-204ENST00000579028 PRIM1P49642 420 aaKnown RBP12.46□□□□□ -0.41
BRIP1-204ENST00000579028 EDC4Q6P2E9 1401 aaKnown RBP12.45□□□□□ -0.42
BRIP1-204ENST00000579028 ADCY9O60503 1353 aa12.45□□□□□ -0.42
BRIP1-204ENST00000579028 IP6K1Q92551 441 aa12.45□□□□□ -0.42
BRIP1-204ENST00000579028 COL23A1Q86Y22 540 aaPredicted RBP12.44□□□□□ -0.42
BRIP1-204ENST00000579028 SYTL4Q96C24 671 aaPredicted RBP12.44□□□□□ -0.42
BRIP1-204ENST00000579028 CCNL1Q9UK58 526 aaPredicted RBP12.44□□□□□ -0.42
BRIP1-204ENST00000579028 HSPA6P17066 643 aa12.43□□□□□ -0.42
BRIP1-204ENST00000579028 HDGFL2Q7Z4V5 671 aaPredicted RBP12.43□□□□□ -0.42
BRIP1-204ENST00000579028 GPBP1L1Q9HC44 474 aaPredicted RBP12.43□□□□□ -0.42
BRIP1-204ENST00000579028 CD2APQ9Y5K6 639 aa12.43□□□□□ -0.42
BRIP1-204ENST00000579028 MSL1Q68DK7 614 aa12.41□□□□□ -0.42
BRIP1-204ENST00000579028 ZCRB1Q8TBF4 217 aaKnown RBP12.41□□□□□ -0.42
BRIP1-204ENST00000579028 SLC12A5Q9H2X9 1139 aa12.41□□□□□ -0.42
BRIP1-204ENST00000579028 SPINK5Q9NQ38 1064 aaPredicted RBP12.41□□□□□ -0.42
BRIP1-204ENST00000579028 C5P01031 1676 aa12.41□□□□□ -0.42
BRIP1-204ENST00000579028 MEGF6O75095 1541 aa12.41□□□□□ -0.42
BRIP1-204ENST00000579028 A0A1W2PP64 1363 aa12.41□□□□□ -0.42
BRIP1-204ENST00000579028 USP47Q96K76 1375 aa12.41□□□□□ -0.42
BRIP1-204ENST00000579028 RGPD2P0DJD1 1756 aa12.41□□□□□ -0.42
BRIP1-204ENST00000579028 LTV1Q96GA3 475 aaPredicted RBP12.4□□□□□ -0.42
BRIP1-204ENST00000579028 TERF2IPQ9NYB0 399 aa12.4□□□□□ -0.42
BRIP1-204ENST00000579028 TAF1LQ8IZX4 1826 aa12.39□□□□□ -0.43
BRIP1-204ENST00000579028 FLAD1Q8NFF5 587 aa12.39□□□□□ -0.43
BRIP1-204ENST00000579028 TMC1Q8TDI8 760 aa12.39□□□□□ -0.43
BRIP1-204ENST00000579028 MAP3K19Q56UN5 1328 aa12.38□□□□□ -0.43
BRIP1-204ENST00000579028 HMGB2P26583 209 aaKnown RBP12.38□□□□□ -0.43
BRIP1-204ENST00000579028 HOXC9P31274 260 aa12.38□□□□□ -0.43
BRIP1-204ENST00000579028 ZNF526Q8TF50 670 aaPredicted RBP12.37□□□□□ -0.43
BRIP1-204ENST00000579028 PUS7Q96PZ0 661 aaKnown RBP12.37□□□□□ -0.43
BRIP1-204ENST00000579028 CGNL1Q0VF96 1302 aa12.37□□□□□ -0.43
BRIP1-204ENST00000579028 SIN3AQ96ST3 1273 aa12.36□□□□□ -0.43
BRIP1-204ENST00000579028 RTL1A6NKG5 1358 aa12.35□□□□□ -0.43
BRIP1-204ENST00000579028 PALLDQ8WX93 1383 aa12.35□□□□□ -0.43
BRIP1-204ENST00000579028 C4BP0C0L5 1744 aa12.35□□□□□ -0.43
BRIP1-204ENST00000579028 TOGARAM1Q9Y4F4 1720 aa12.35□□□□□ -0.43
BRIP1-204ENST00000579028 KIF3CO14782 793 aa12.35□□□□□ -0.43
BRIP1-204ENST00000579028 AMPHP49418 695 aa12.35□□□□□ -0.43
BRIP1-204ENST00000579028 COG3Q96JB2 828 aa12.35□□□□□ -0.43
BRIP1-204ENST00000579028 CEP350Q5VT06 3117 aa12.35□□□□□ -0.43
BRIP1-204ENST00000579028 IGSF1Q8N6C5 1336 aa12.35□□□□□ -0.43
BRIP1-204ENST00000579028 GOLGB1Q14789 3259 aaKnown RBP12.35□□□□□ -0.43
BRIP1-204ENST00000579028 UBR3Q6ZT12 1888 aa12.34□□□□□ -0.43
BRIP1-204ENST00000579028 CICQ96RK0 1608 aaPredicted RBP12.34□□□□□ -0.43
BRIP1-204ENST00000579028 NBPF6Q5VWK0 638 aa12.34□□□□□ -0.43
BRIP1-204ENST00000579028 NBPF4Q96M43 638 aa12.34□□□□□ -0.43
BRIP1-204ENST00000579028 CARD11Q9BXL7 1154 aa12.34□□□□□ -0.43
BRIP1-204ENST00000579028 FBLN1P23142 703 aa12.33□□□□□ -0.44
BRIP1-204ENST00000579028 NSD3Q9BZ95 1437 aa12.33□□□□□ -0.44
BRIP1-204ENST00000579028 AMIGO3Q86WK7 504 aa12.32□□□□□ -0.44
BRIP1-204ENST00000579028 RAPGEF4Q8WZA2 1011 aa12.32□□□□□ -0.44
BRIP1-204ENST00000579028 PCDH11XQ9BZA7 1347 aa12.32□□□□□ -0.44
BRIP1-204ENST00000579028 PCDH11YQ9BZA8 1340 aa12.32□□□□□ -0.44
BRIP1-204ENST00000579028 ITGB4P16144 1822 aa12.32□□□□□ -0.44
BRIP1-204ENST00000579028 CAPN15O75808 1086 aa12.31□□□□□ -0.44
BRIP1-204ENST00000579028 TATP17735 454 aaPredicted RBP12.31□□□□□ -0.44
BRIP1-204ENST00000579028 APLP1P51693 650 aa12.31□□□□□ -0.44
BRIP1-204ENST00000579028 NEUROD1Q13562 356 aa12.31□□□□□ -0.44
BRIP1-204ENST00000579028 USHBP1Q8N6Y0 703 aa12.31□□□□□ -0.44
BRIP1-204ENST00000579028 SMARCC1Q92922 1105 aaPredicted RBP12.31□□□□□ -0.44
BRIP1-204ENST00000579028 AK7Q96M32 723 aa12.31□□□□□ -0.44
BRIP1-204ENST00000579028 MAP2P11137 1827 aaKnown RBP12.3□□□□□ -0.44
BRIP1-204ENST00000579028 SMG6Q86US8 1419 aaKnown RBP12.3□□□□□ -0.44
BRIP1-204ENST00000579028 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.3□□□□□ -0.44
BRIP1-204ENST00000579028 DSG3P32926 999 aa12.3□□□□□ -0.44
BRIP1-204ENST00000579028 MPRIPQ6WCQ1 1025 aa12.3□□□□□ -0.44
BRIP1-204ENST00000579028 DNAJC5GQ8N7S2 189 aa12.3□□□□□ -0.44
BRIP1-204ENST00000579028 WWC3Q9ULE0 1092 aa12.3□□□□□ -0.44
BRIP1-204ENST00000579028 CYP27B1O15528 508 aa12.29□□□□□ -0.44
BRIP1-204ENST00000579028 SSFA2P28290 1259 aa12.29□□□□□ -0.44
BRIP1-204ENST00000579028 RRS1Q15050 365 aaKnown RBP12.29□□□□□ -0.44
BRIP1-204ENST00000579028 INSRP06213 1382 aa12.29□□□□□ -0.44
BRIP1-204ENST00000579028 PKD1L3Q7Z443 1732 aa12.28□□□□□ -0.44
BRIP1-204ENST00000579028 KIF13BQ9NQT8 1826 aa12.28□□□□□ -0.44
BRIP1-204ENST00000579028 TOMM70O94826 608 aa12.28□□□□□ -0.44
BRIP1-204ENST00000579028 PHF14O94880 888 aa12.28□□□□□ -0.44
BRIP1-204ENST00000579028 KIAA1551Q9HCM1 1747 aa12.28□□□□□ -0.44
BRIP1-204ENST00000579028 SMIM5Q71RC9 77 aa12.27□□□□□ -0.45
BRIP1-204ENST00000579028 TESK2Q96S53 571 aa12.27□□□□□ -0.45
BRIP1-204ENST00000579028 KIF24Q5T7B8 1368 aa12.27□□□□□ -0.45
BRIP1-204ENST00000579028 PXDNLA1KZ92 1463 aa12.27□□□□□ -0.45
BRIP1-204ENST00000579028 FYB1O15117 783 aa12.26□□□□□ -0.45
BRIP1-204ENST00000579028 LINC00116Q8NCU8 138 aa12.26□□□□□ -0.45
BRIP1-204ENST00000579028 PIGBQ92521 554 aa12.26□□□□□ -0.45
BRIP1-204ENST00000579028 WDR90Q96KV7 1748 aa12.25□□□□□ -0.45
BRIP1-204ENST00000579028 LOC102724428A0A0B4J2F2 783 aa12.25□□□□□ -0.45
BRIP1-204ENST00000579028 SIK1P57059 783 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms