RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 RAPGEF4Q8WZA2 1011 aa19.67■□□□□ 0.74
MKS1-207ENST00000578789 EYA1Q99502 592 aa19.67■□□□□ 0.74
MKS1-207ENST00000578789 PARD3Q8TEW0 1356 aa19.67■□□□□ 0.74
MKS1-207ENST00000578789 IGSF1Q8N6C5 1336 aa19.66■□□□□ 0.74
MKS1-207ENST00000578789 PLEKHG2Q9H7P9 1386 aa19.66■□□□□ 0.74
MKS1-207ENST00000578789 DOT1LQ8TEK3 1739 aa19.65■□□□□ 0.74
MKS1-207ENST00000578789 TATP17735 454 aaPredicted RBP19.65■□□□□ 0.74
MKS1-207ENST00000578789 ZCRB1Q8TBF4 217 aaKnown RBP19.65■□□□□ 0.74
MKS1-207ENST00000578789 BCL11BQ9C0K0 894 aaPredicted RBP19.65■□□□□ 0.74
MKS1-207ENST00000578789 APBA3O96018 575 aa19.64■□□□□ 0.73
MKS1-207ENST00000578789 EN1Q05925 392 aaPredicted RBP19.64■□□□□ 0.73
MKS1-207ENST00000578789 NUP188Q5SRE5 1749 aa19.64■□□□□ 0.73
MKS1-207ENST00000578789 CAMKK2Q96RR4 588 aa19.63■□□□□ 0.73
MKS1-207ENST00000578789 COL3A1P02461 1466 aaPredicted RBP19.62■□□□□ 0.73
MKS1-207ENST00000578789 MTHFSP49914 203 aa19.62■□□□□ 0.73
MKS1-207ENST00000578789 BTAF1O14981 1849 aa19.62■□□□□ 0.73
MKS1-207ENST00000578789 PCDH11XQ9BZA7 1347 aa19.61■□□□□ 0.73
MKS1-207ENST00000578789 PCDH11YQ9BZA8 1340 aa19.61■□□□□ 0.73
MKS1-207ENST00000578789 EZH2Q15910 746 aaKnown RBP19.61■□□□□ 0.73
MKS1-207ENST00000578789 PTF1AQ7RTS3 328 aa19.61■□□□□ 0.73
MKS1-207ENST00000578789 DDX54Q8TDD1 881 aaKnown RBP19.61■□□□□ 0.73
MKS1-207ENST00000578789 IL13P35225 146 aa19.6■□□□□ 0.73
MKS1-207ENST00000578789 PLSCR1O15162 318 aa19.59■□□□□ 0.73
MKS1-207ENST00000578789 KDRP35968 1356 aa19.58■□□□□ 0.73
MKS1-207ENST00000578789 KCNQ2O43526 872 aa19.58■□□□□ 0.72
MKS1-207ENST00000578789 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.58■□□□□ 0.72
MKS1-207ENST00000578789 TOGARAM1Q9Y4F4 1720 aa19.58■□□□□ 0.72
MKS1-207ENST00000578789 ACSBG1Q96GR2 724 aa19.57■□□□□ 0.72
MKS1-207ENST00000578789 CYP27B1O15528 508 aa19.56■□□□□ 0.72
MKS1-207ENST00000578789 CNGB1Q14028 1251 aaPredicted RBP19.56■□□□□ 0.72
MKS1-207ENST00000578789 KAT6BQ8WYB5 2073 aa19.55■□□□□ 0.72
MKS1-207ENST00000578789 SPG7Q9UQ90 795 aa19.55■□□□□ 0.72
MKS1-207ENST00000578789 ITGB4P16144 1822 aa19.53■□□□□ 0.72
MKS1-207ENST00000578789 DIAPH1O60610 1272 aaKnown RBP19.53■□□□□ 0.72
MKS1-207ENST00000578789 PPP2R1AP30153 589 aa19.53■□□□□ 0.72
MKS1-207ENST00000578789 AEBP1Q8IUX7 1158 aa19.53■□□□□ 0.72
MKS1-207ENST00000578789 LY75O60449 1722 aa19.52■□□□□ 0.72
MKS1-207ENST00000578789 NKX1-1Q15270 411 aaPredicted RBP19.52■□□□□ 0.72
MKS1-207ENST00000578789 SULT6B1Q6IMI4 303 aa19.52■□□□□ 0.72
MKS1-207ENST00000578789 PAPPAQ13219 1627 aa19.51■□□□□ 0.71
MKS1-207ENST00000578789 PRIM1P49642 420 aaKnown RBP19.5■□□□□ 0.71
MKS1-207ENST00000578789 PHKG2P15735 406 aa19.49■□□□□ 0.71
MKS1-207ENST00000578789 DDX10Q13206 875 aaKnown RBP19.49■□□□□ 0.71
MKS1-207ENST00000578789 AMOTQ4VCS5 1084 aa19.49■□□□□ 0.71
MKS1-207ENST00000578789 IFNL2Q8IZJ0 200 aa19.49■□□□□ 0.71
MKS1-207ENST00000578789 PROM2Q8N271 834 aa19.49■□□□□ 0.71
MKS1-207ENST00000578789 TXNRD1Q16881 649 aa19.48■□□□□ 0.71
MKS1-207ENST00000578789 PLEKHO1Q53GL0 409 aaPredicted RBP19.48■□□□□ 0.71
MKS1-207ENST00000578789 CFAP53Q96M91 514 aa19.48■□□□□ 0.71
MKS1-207ENST00000578789 SYTL4Q96C24 671 aaPredicted RBP19.47■□□□□ 0.71
MKS1-207ENST00000578789 NBPF14Q5TI25 921 aa19.45■□□□□ 0.7
MKS1-207ENST00000578789 KDM6AO15550 1401 aaPredicted RBP19.44■□□□□ 0.7
MKS1-207ENST00000578789 HMOX1P09601 288 aa19.44■□□□□ 0.7
MKS1-207ENST00000578789 ZNF530Q6P9A1 599 aaPredicted RBP19.44■□□□□ 0.7
MKS1-207ENST00000578789 SCN11AQ9UI33 1791 aa19.44■□□□□ 0.7
MKS1-207ENST00000578789 PSDA5PKW4 1024 aaPredicted RBP19.43■□□□□ 0.7
MKS1-207ENST00000578789 HSP90AB1P08238 724 aaKnown RBP19.43■□□□□ 0.7
MKS1-207ENST00000578789 R3HDM1Q15032 1099 aaKnown RBP19.43■□□□□ 0.7
MKS1-207ENST00000578789 RALBP1Q15311 655 aa19.43■□□□□ 0.7
MKS1-207ENST00000578789 VIRMAQ69YN4 1812 aaKnown RBP19.43■□□□□ 0.7
MKS1-207ENST00000578789 LRP5O75197 1615 aa19.43■□□□□ 0.7
MKS1-207ENST00000578789 ADAMTS7Q9UKP4 1686 aa19.43■□□□□ 0.7
MKS1-207ENST00000578789 U2SURPO15042 1029 aaKnown RBP19.42■□□□□ 0.7
MKS1-207ENST00000578789 ANO8Q9HCE9 1232 aaPredicted RBP19.42■□□□□ 0.7
MKS1-207ENST00000578789 SLC27A3Q5K4L6 730 aa19.41■□□□□ 0.7
MKS1-207ENST00000578789 DCAF5Q96JK2 942 aa19.41■□□□□ 0.7
MKS1-207ENST00000578789 CASZ1Q86V15 1759 aa19.41■□□□□ 0.7
MKS1-207ENST00000578789 QSER1Q2KHR3 1735 aa19.4■□□□□ 0.7
MKS1-207ENST00000578789 C1orf141Q5JVX7 400 aa19.4■□□□□ 0.7
MKS1-207ENST00000578789 MPRIPQ6WCQ1 1025 aa19.4■□□□□ 0.7
MKS1-207ENST00000578789 POTEDQ86YR6 584 aa19.4■□□□□ 0.7
MKS1-207ENST00000578789 PIGBQ92521 554 aa19.4■□□□□ 0.7
MKS1-207ENST00000578789 LRRC4BQ9NT99 713 aa19.4■□□□□ 0.7
MKS1-207ENST00000578789 NUDCQ9Y266 331 aa19.4■□□□□ 0.7
MKS1-207ENST00000578789 PALLDQ8WX93 1383 aa19.39■□□□□ 0.69
MKS1-207ENST00000578789 C5P01031 1676 aa19.39■□□□□ 0.69
MKS1-207ENST00000578789 TAF1LQ8IZX4 1826 aa19.39■□□□□ 0.69
MKS1-207ENST00000578789 ERVV-2B6SEH9 535 aa19.38■□□□□ 0.69
MKS1-207ENST00000578789 MRC1P22897 1456 aa19.38■□□□□ 0.69
MKS1-207ENST00000578789 AKAP4Q5JQC9 854 aa19.38■□□□□ 0.69
MKS1-207ENST00000578789 TMOD3Q9NYL9 352 aa19.38■□□□□ 0.69
MKS1-207ENST00000578789 ZNF316A6NFI3 1004 aaPredicted RBP19.37■□□□□ 0.69
MKS1-207ENST00000578789 MTHFSDQ2M296 383 aaKnown RBP19.37■□□□□ 0.69
MKS1-207ENST00000578789 SMARCC1Q92922 1105 aaPredicted RBP19.37■□□□□ 0.69
MKS1-207ENST00000578789 RSPH6AQ9H0K4 717 aa19.37■□□□□ 0.69
MKS1-207ENST00000578789 STK32BQ9NY57 414 aa19.37■□□□□ 0.69
MKS1-207ENST00000578789 TUBGCP6Q96RT7 1819 aa19.37■□□□□ 0.69
MKS1-207ENST00000578789 MYBBP1AQ9BQG0 1328 aaKnown RBP19.36■□□□□ 0.69
MKS1-207ENST00000578789 SLC15A2Q16348 729 aa19.36■□□□□ 0.69
MKS1-207ENST00000578789 ZNF831Q5JPB2 1677 aa19.36■□□□□ 0.69
MKS1-207ENST00000578789 CCNL1Q9UK58 526 aaPredicted RBP19.35■□□□□ 0.69
MKS1-207ENST00000578789 U2AF1L5P0DN76 240 aaPredicted RBP19.34■□□□□ 0.69
MKS1-207ENST00000578789 PRKAR2BP31323 418 aa19.34■□□□□ 0.69
MKS1-207ENST00000578789 U2AF1Q01081 240 aaKnown RBP eCLIP19.34■□□□□ 0.69
MKS1-207ENST00000578789 FCHSD2O94868 740 aa19.33■□□□□ 0.68
MKS1-207ENST00000578789 ZNF827Q17R98 1081 aa19.33■□□□□ 0.68
MKS1-207ENST00000578789 GAS2L2Q8NHY3 880 aa19.33■□□□□ 0.68
MKS1-207ENST00000578789 AKT1S1Q96B36 256 aa19.33■□□□□ 0.68
MKS1-207ENST00000578789 CICQ96RK0 1608 aaPredicted RBP19.32■□□□□ 0.68
MKS1-207ENST00000578789 MAP3K5Q99683 1374 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms