RNA–Protein interactions for RNA: ENST00000578718.1

KPNB1-206, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-206ENST00000578718 TSGA10IPQ3SY00 556 aa6.87□□□□□ -1.31
KPNB1-206ENST00000578718 CDCA8Q53HL2 280 aa6.87□□□□□ -1.31
KPNB1-206ENST00000578718 CC2D2BQ6DHV5 1058 aa6.87□□□□□ -1.31
KPNB1-206ENST00000578718 OGFOD1Q8N543 542 aa6.87□□□□□ -1.31
KPNB1-206ENST00000578718 CDCA7Q9BWT1 371 aaPredicted RBP6.87□□□□□ -1.31
KPNB1-206ENST00000578718 ERVK-9P63128 1117 aa6.86□□□□□ -1.31
KPNB1-206ENST00000578718 GTF2IP78347 998 aa6.86□□□□□ -1.31
KPNB1-206ENST00000578718 NNTQ13423 1086 aa6.86□□□□□ -1.31
KPNB1-206ENST00000578718 PPP1R26Q5T8A7 1209 aaPredicted RBP6.86□□□□□ -1.31
KPNB1-206ENST00000578718 LARGE2Q8N3Y3 721 aa6.86□□□□□ -1.31
KPNB1-206ENST00000578718 DNAAF2Q9NVR5 837 aaKnown RBP6.86□□□□□ -1.31
KPNB1-206ENST00000578718 RBM19Q9Y4C8 960 aaKnown RBP6.86□□□□□ -1.31
KPNB1-206ENST00000578718 MYT1Q01538 1121 aa6.85□□□□□ -1.31
KPNB1-206ENST00000578718 PSME1Q06323 249 aa6.85□□□□□ -1.31
KPNB1-206ENST00000578718 PTK7Q13308 1070 aa6.85□□□□□ -1.31
KPNB1-206ENST00000578718 TRAIPQ9BWF2 469 aa6.85□□□□□ -1.31
KPNB1-206ENST00000578718 NOVA2Q9UNW9 492 aaKnown RBP6.85□□□□□ -1.31
KPNB1-206ENST00000578718 TNFRSF10AO00220 468 aa6.84□□□□□ -1.31
KPNB1-206ENST00000578718 NR3C2P08235 984 aa6.84□□□□□ -1.31
KPNB1-206ENST00000578718 CLDN10P78369 228 aa6.84□□□□□ -1.31
KPNB1-206ENST00000578718 CRTC2Q53ET0 693 aaPredicted RBP6.84□□□□□ -1.31
KPNB1-206ENST00000578718 ANKMY2Q8IV38 441 aa6.84□□□□□ -1.31
KPNB1-206ENST00000578718 SIX5Q8N196 739 aa6.84□□□□□ -1.31
KPNB1-206ENST00000578718 ZNF784Q8NCA9 323 aaPredicted RBP6.84□□□□□ -1.31
KPNB1-206ENST00000578718 CYLDQ9NQC7 956 aa6.84□□□□□ -1.31
KPNB1-206ENST00000578718 TMPRSS4Q9NRS4 437 aa6.84□□□□□ -1.31
KPNB1-206ENST00000578718 TOR4AQ9NXH8 423 aa6.84□□□□□ -1.31
KPNB1-206ENST00000578718 SCTRP47872 440 aa6.83□□□□□ -1.32
KPNB1-206ENST00000578718 CYP2U1Q7Z449 544 aa6.83□□□□□ -1.32
KPNB1-206ENST00000578718 FAM200AQ8TCP9 573 aa6.83□□□□□ -1.32
KPNB1-206ENST00000578718 ZNF594Q96JF6 807 aaPredicted RBP6.83□□□□□ -1.32
KPNB1-206ENST00000578718 PCDHGA11Q9Y5H2 935 aa6.83□□□□□ -1.32
KPNB1-206ENST00000578718 CCDC102BQ68D86 513 aa6.82□□□□□ -1.32
KPNB1-206ENST00000578718 TPCN2Q8NHX9 752 aa6.82□□□□□ -1.32
KPNB1-206ENST00000578718 ZMIZ1Q9ULJ6 1067 aa6.82□□□□□ -1.32
KPNB1-206ENST00000578718 J3QL48 77 aa6.81□□□□□ -1.32
KPNB1-206ENST00000578718 LILRA1O75019 489 aa6.81□□□□□ -1.32
KPNB1-206ENST00000578718 SEC13P55735 322 aa6.81□□□□□ -1.32
KPNB1-206ENST00000578718 DPYDQ12882 1025 aa6.81□□□□□ -1.32
KPNB1-206ENST00000578718 SWI5Q1ZZU3 235 aa6.81□□□□□ -1.32
KPNB1-206ENST00000578718 B4GALNT3Q6L9W6 998 aa6.81□□□□□ -1.32
KPNB1-206ENST00000578718 TRIM67Q6ZTA4 783 aa6.81□□□□□ -1.32
KPNB1-206ENST00000578718 OSBPL3Q9H4L5 887 aa6.81□□□□□ -1.32
KPNB1-206ENST00000578718 ZBTB7BO15156 539 aaPredicted RBP6.8□□□□□ -1.32
KPNB1-206ENST00000578718 SMPD1P17405 629 aa6.8□□□□□ -1.32
KPNB1-206ENST00000578718 WDR4P57081 412 aaKnown RBP6.8□□□□□ -1.32
KPNB1-206ENST00000578718 TMEM164Q5U3C3 297 aa6.8□□□□□ -1.32
KPNB1-206ENST00000578718 KCTD17Q8N5Z5 321 aa6.8□□□□□ -1.32
KPNB1-206ENST00000578718 STK32AQ8WU08 396 aa6.8□□□□□ -1.32
KPNB1-206ENST00000578718 KIAA1024Q9UPX6 916 aa6.8□□□□□ -1.32
KPNB1-206ENST00000578718 TMEM88BA6NKF7 163 aa6.79□□□□□ -1.32
KPNB1-206ENST00000578718 M0R2N6 131 aa6.79□□□□□ -1.32
KPNB1-206ENST00000578718 WASLO00401 505 aaPredicted RBP6.79□□□□□ -1.32
KPNB1-206ENST00000578718 ZIC2O95409 532 aaPredicted RBP6.79□□□□□ -1.32
KPNB1-206ENST00000578718 GNRH1P01148 92 aa6.79□□□□□ -1.32
KPNB1-206ENST00000578718 ADH1AP07327 375 aa6.79□□□□□ -1.32
KPNB1-206ENST00000578718 ESCO1Q5FWF5 840 aa6.79□□□□□ -1.32
KPNB1-206ENST00000578718 PDZRN3Q9UPQ7 1066 aa6.79□□□□□ -1.32
KPNB1-206ENST00000578718 PATL2C9JE40 543 aaKnown RBP6.78□□□□□ -1.32
KPNB1-206ENST00000578718 BACH1O14867 736 aa6.78□□□□□ -1.32
KPNB1-206ENST00000578718 DKK1O94907 266 aa6.78□□□□□ -1.32
KPNB1-206ENST00000578718 TIMP2P16035 220 aa6.78□□□□□ -1.32
KPNB1-206ENST00000578718 ITPKCQ96DU7 683 aa6.78□□□□□ -1.32
KPNB1-206ENST00000578718 KLF16Q9BXK1 252 aaPredicted RBP6.78□□□□□ -1.32
KPNB1-206ENST00000578718 BRD1O95696 1058 aa6.77□□□□□ -1.33
KPNB1-206ENST00000578718 GDF10P55107 478 aa6.77□□□□□ -1.33
KPNB1-206ENST00000578718 Q6ZVU0 165 aa6.77□□□□□ -1.33
KPNB1-206ENST00000578718 CLP1Q92989 425 aaKnown RBP6.77□□□□□ -1.33
KPNB1-206ENST00000578718 SFI1A8K8P3 1242 aa6.76□□□□□ -1.33
KPNB1-206ENST00000578718 INHAP05111 366 aa6.76□□□□□ -1.33
KPNB1-206ENST00000578718 ADD1P35611 737 aaKnown RBP6.76□□□□□ -1.33
KPNB1-206ENST00000578718 SCNN1DP51172 638 aa6.76□□□□□ -1.33
KPNB1-206ENST00000578718 MEIOBQ8N635 442 aa6.76□□□□□ -1.33
KPNB1-206ENST00000578718 ZFAND3Q9H8U3 227 aa6.76□□□□□ -1.33
KPNB1-206ENST00000578718 ZNF358Q9NW07 568 aa6.76□□□□□ -1.33
KPNB1-206ENST00000578718 TMEM229AB2RXF0 380 aa6.75□□□□□ -1.33
KPNB1-206ENST00000578718 FAM69CQ0P6D2 419 aa6.75□□□□□ -1.33
KPNB1-206ENST00000578718 CBLBQ13191 982 aa6.75□□□□□ -1.33
KPNB1-206ENST00000578718 HPS1Q92902 700 aa6.75□□□□□ -1.33
KPNB1-206ENST00000578718 ETNK1Q9HBU6 452 aa6.75□□□□□ -1.33
KPNB1-206ENST00000578718 ARHGEF10LQ9HCE6 1279 aa6.75□□□□□ -1.33
KPNB1-206ENST00000578718 FAM187AA6NFU0 413 aa6.74□□□□□ -1.33
KPNB1-206ENST00000578718 PTGIRP43119 386 aa6.74□□□□□ -1.33
KPNB1-206ENST00000578718 KCNA1Q09470 495 aa6.74□□□□□ -1.33
KPNB1-206ENST00000578718 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.74□□□□□ -1.33
KPNB1-206ENST00000578718 HINFPQ9BQA5 517 aa6.74□□□□□ -1.33
KPNB1-206ENST00000578718 ZBTB7CA1YPR0 619 aa6.73□□□□□ -1.33
KPNB1-206ENST00000578718 CAPN5O15484 640 aaPredicted RBP6.73□□□□□ -1.33
KPNB1-206ENST00000578718 UPP2O95045 317 aa6.73□□□□□ -1.33
KPNB1-206ENST00000578718 ATP2B4P23634 1241 aa6.73□□□□□ -1.33
KPNB1-206ENST00000578718 CLN3Q13286 438 aa6.73□□□□□ -1.33
KPNB1-206ENST00000578718 LAPTM4AQ15012 233 aa6.73□□□□□ -1.33
KPNB1-206ENST00000578718 SLC4A9Q96Q91 983 aa6.73□□□□□ -1.33
KPNB1-206ENST00000578718 TSEN34Q9BSV6 310 aaKnown RBP6.73□□□□□ -1.33
KPNB1-206ENST00000578718 A0A1W2PRU2 124 aa6.72□□□□□ -1.33
KPNB1-206ENST00000578718 CARNS1A5YM72 827 aa6.72□□□□□ -1.33
KPNB1-206ENST00000578718 NRG2O14511 850 aaPredicted RBP6.72□□□□□ -1.33
KPNB1-206ENST00000578718 DGAT1O75907 488 aa6.72□□□□□ -1.33
KPNB1-206ENST00000578718 AVPP01185 164 aa6.72□□□□□ -1.33
KPNB1-206ENST00000578718 CTC1Q2NKJ3 1217 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms