RNA–Protein interactions for RNA: ENST00000578609.1

SLC6A4-204, Transcript of solute carrier family 6 member 4, humanhuman

TSL 4

Gene SLC6A4, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-204ENST00000578609 KDRP35968 1356 aa20.62■□□□□ 0.89
SLC6A4-204ENST00000578609 TATP17735 454 aaPredicted RBP20.62■□□□□ 0.89
SLC6A4-204ENST00000578609 ZCRB1Q8TBF4 217 aaKnown RBP20.6■□□□□ 0.89
SLC6A4-204ENST00000578609 DIAPH1O60610 1272 aaKnown RBP20.59■□□□□ 0.89
SLC6A4-204ENST00000578609 RALBP1Q15311 655 aa20.59■□□□□ 0.89
SLC6A4-204ENST00000578609 SBF2Q86WG5 1849 aa20.59■□□□□ 0.89
SLC6A4-204ENST00000578609 NHSQ6T4R5 1651 aa20.58■□□□□ 0.89
SLC6A4-204ENST00000578609 PCDH11XQ9BZA7 1347 aa20.57■□□□□ 0.88
SLC6A4-204ENST00000578609 PCDH11YQ9BZA8 1340 aa20.57■□□□□ 0.88
SLC6A4-204ENST00000578609 CFAP53Q96M91 514 aa20.57■□□□□ 0.88
SLC6A4-204ENST00000578609 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.57■□□□□ 0.88
SLC6A4-204ENST00000578609 TRIM37O94972 964 aa20.56■□□□□ 0.88
SLC6A4-204ENST00000578609 AEBP1Q8IUX7 1158 aa20.56■□□□□ 0.88
SLC6A4-204ENST00000578609 SF3B2Q13435 895 aaKnown RBP20.55■□□□□ 0.88
SLC6A4-204ENST00000578609 SULT6B1Q6IMI4 303 aa20.55■□□□□ 0.88
SLC6A4-204ENST00000578609 DDX54Q8TDD1 881 aaKnown RBP20.54■□□□□ 0.88
SLC6A4-204ENST00000578609 SPG7Q9UQ90 795 aa20.53■□□□□ 0.88
SLC6A4-204ENST00000578609 DOT1LQ8TEK3 1739 aa20.53■□□□□ 0.88
SLC6A4-204ENST00000578609 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
SLC6A4-204ENST00000578609 CYP27B1O15528 508 aa20.52■□□□□ 0.88
SLC6A4-204ENST00000578609 BCL11BQ9C0K0 894 aaPredicted RBP20.52■□□□□ 0.88
SLC6A4-204ENST00000578609 RGPD3A6NKT7 1758 aaPredicted RBP20.51■□□□□ 0.87
SLC6A4-204ENST00000578609 RGPD4Q7Z3J3 1758 aa20.51■□□□□ 0.87
SLC6A4-204ENST00000578609 BAG6P46379 1132 aa20.51■□□□□ 0.87
SLC6A4-204ENST00000578609 PRKRIP1Q9H875 184 aaPredicted RBP20.51■□□□□ 0.87
SLC6A4-204ENST00000578609 DEFB132Q7Z7B7 95 aa20.5■□□□□ 0.87
SLC6A4-204ENST00000578609 HMOX1P09601 288 aa20.49■□□□□ 0.87
SLC6A4-204ENST00000578609 AMOTQ4VCS5 1084 aa20.49■□□□□ 0.87
SLC6A4-204ENST00000578609 PTF1AQ7RTS3 328 aa20.49■□□□□ 0.87
SLC6A4-204ENST00000578609 TOGARAM1Q9Y4F4 1720 aa20.49■□□□□ 0.87
SLC6A4-204ENST00000578609 U2SURPO15042 1029 aaKnown RBP20.48■□□□□ 0.87
SLC6A4-204ENST00000578609 NKX1-1Q15270 411 aaPredicted RBP20.48■□□□□ 0.87
SLC6A4-204ENST00000578609 KCNQ2O43526 872 aa20.47■□□□□ 0.87
SLC6A4-204ENST00000578609 APBA3O96018 575 aa20.47■□□□□ 0.87
SLC6A4-204ENST00000578609 PHKG2P15735 406 aa20.47■□□□□ 0.87
SLC6A4-204ENST00000578609 PLEKHO1Q53GL0 409 aaPredicted RBP20.47■□□□□ 0.87
SLC6A4-204ENST00000578609 ACSBG1Q96GR2 724 aa20.47■□□□□ 0.87
SLC6A4-204ENST00000578609 NUDCQ9Y266 331 aa20.47■□□□□ 0.87
SLC6A4-204ENST00000578609 RREB1Q92766 1687 aa20.47■□□□□ 0.87
SLC6A4-204ENST00000578609 BTAF1O14981 1849 aa20.46■□□□□ 0.87
SLC6A4-204ENST00000578609 IFNL2Q8IZJ0 200 aa20.45■□□□□ 0.86
SLC6A4-204ENST00000578609 CAMKK2Q96RR4 588 aa20.45■□□□□ 0.86
SLC6A4-204ENST00000578609 EN1Q05925 392 aaPredicted RBP20.44■□□□□ 0.86
SLC6A4-204ENST00000578609 RSPH6AQ9H0K4 717 aa20.44■□□□□ 0.86
SLC6A4-204ENST00000578609 PLSCR1O15162 318 aa20.43■□□□□ 0.86
SLC6A4-204ENST00000578609 ZNF530Q6P9A1 599 aaPredicted RBP20.43■□□□□ 0.86
SLC6A4-204ENST00000578609 KDM6AO15550 1401 aaPredicted RBP20.43■□□□□ 0.86
SLC6A4-204ENST00000578609 U2AF1L5P0DN76 240 aaPredicted RBP20.42■□□□□ 0.86
SLC6A4-204ENST00000578609 PRIM1P49642 420 aaKnown RBP20.42■□□□□ 0.86
SLC6A4-204ENST00000578609 U2AF1Q01081 240 aaKnown RBP eCLIP20.42■□□□□ 0.86
SLC6A4-204ENST00000578609 NUP188Q5SRE5 1749 aa20.41■□□□□ 0.86
SLC6A4-204ENST00000578609 EZH2Q15910 746 aaKnown RBP20.41■□□□□ 0.86
SLC6A4-204ENST00000578609 HSP90AB1P08238 724 aaKnown RBP20.4■□□□□ 0.86
SLC6A4-204ENST00000578609 ADAMTS7Q9UKP4 1686 aa20.4■□□□□ 0.86
SLC6A4-204ENST00000578609 FCHSD2O94868 740 aa20.39■□□□□ 0.85
SLC6A4-204ENST00000578609 PRKAR2BP31323 418 aa20.39■□□□□ 0.85
SLC6A4-204ENST00000578609 MTHFSDQ2M296 383 aaKnown RBP20.39■□□□□ 0.85
SLC6A4-204ENST00000578609 SYTL4Q96C24 671 aaPredicted RBP20.39■□□□□ 0.85
SLC6A4-204ENST00000578609 DCAF5Q96JK2 942 aa20.39■□□□□ 0.85
SLC6A4-204ENST00000578609 ITGB4P16144 1822 aa20.39■□□□□ 0.85
SLC6A4-204ENST00000578609 C1orf141Q5JVX7 400 aa20.38■□□□□ 0.85
SLC6A4-204ENST00000578609 AKAP4Q5JQC9 854 aa20.37■□□□□ 0.85
SLC6A4-204ENST00000578609 MRC1P22897 1456 aa20.37■□□□□ 0.85
SLC6A4-204ENST00000578609 LY75O60449 1722 aa20.36■□□□□ 0.85
SLC6A4-204ENST00000578609 SCN11AQ9UI33 1791 aa20.36■□□□□ 0.85
SLC6A4-204ENST00000578609 GAS2L2Q8NHY3 880 aa20.35■□□□□ 0.85
SLC6A4-204ENST00000578609 PHACTR3Q96KR7 559 aa20.35■□□□□ 0.85
SLC6A4-204ENST00000578609 ERVV-2B6SEH9 535 aa20.34■□□□□ 0.85
SLC6A4-204ENST00000578609 ANP32CO43423 234 aa20.34■□□□□ 0.85
SLC6A4-204ENST00000578609 PROM2Q8N271 834 aa20.34■□□□□ 0.85
SLC6A4-204ENST00000578609 PAPPAQ13219 1627 aa20.34■□□□□ 0.85
SLC6A4-204ENST00000578609 MAP3K5Q99683 1374 aa20.34■□□□□ 0.85
SLC6A4-204ENST00000578609 TXNRD1Q16881 649 aa20.33■□□□□ 0.85
SLC6A4-204ENST00000578609 MPRIPQ6WCQ1 1025 aa20.33■□□□□ 0.85
SLC6A4-204ENST00000578609 PIGBQ92521 554 aa20.33■□□□□ 0.85
SLC6A4-204ENST00000578609 TMOD3Q9NYL9 352 aa20.33■□□□□ 0.85
SLC6A4-204ENST00000578609 PLEKHF1Q96S99 279 aa20.32■□□□□ 0.84
SLC6A4-204ENST00000578609 PALLDQ8WX93 1383 aa20.31■□□□□ 0.84
SLC6A4-204ENST00000578609 KAT6BQ8WYB5 2073 aa20.3■□□□□ 0.84
SLC6A4-204ENST00000578609 RNMTO43148 476 aaKnown RBP20.29■□□□□ 0.84
SLC6A4-204ENST00000578609 SLC27A3Q5K4L6 730 aa20.29■□□□□ 0.84
SLC6A4-204ENST00000578609 PNNQ9H307 717 aaKnown RBP20.29■□□□□ 0.84
SLC6A4-204ENST00000578609 VIRMAQ69YN4 1812 aaKnown RBP20.29■□□□□ 0.84
SLC6A4-204ENST00000578609 GNAT3A8MTJ3 354 aa20.28■□□□□ 0.84
SLC6A4-204ENST00000578609 CABP4P57796 275 aa20.28■□□□□ 0.84
SLC6A4-204ENST00000578609 SMARCC1Q92922 1105 aaPredicted RBP20.28■□□□□ 0.84
SLC6A4-204ENST00000578609 CEMIPQ8WUJ3 1361 aa20.28■□□□□ 0.84
SLC6A4-204ENST00000578609 WDR43Q15061 677 aaKnown RBP eCLIP20.27■□□□□ 0.84
SLC6A4-204ENST00000578609 LGR6Q9HBX8 967 aa20.27■□□□□ 0.84
SLC6A4-204ENST00000578609 LRRC4BQ9NT99 713 aa20.27■□□□□ 0.84
SLC6A4-204ENST00000578609 NEFMP07197 916 aa20.26■□□□□ 0.83
SLC6A4-204ENST00000578609 CCDC184Q52MB2 194 aa20.26■□□□□ 0.83
SLC6A4-204ENST00000578609 SLC52A2Q9HAB3 445 aa20.26■□□□□ 0.83
SLC6A4-204ENST00000578609 ANO8Q9HCE9 1232 aaPredicted RBP20.26■□□□□ 0.83
SLC6A4-204ENST00000578609 MAPK8IP3Q9UPT6 1336 aa20.26■□□□□ 0.83
SLC6A4-204ENST00000578609 ATG3Q9NT62 314 aa20.25■□□□□ 0.83
SLC6A4-204ENST00000578609 ASAP1Q9ULH1 1129 aa20.25■□□□□ 0.83
SLC6A4-204ENST00000578609 SIPA1L3O60292 1781 aaPredicted RBP20.25■□□□□ 0.83
SLC6A4-204ENST00000578609 ZNF831Q5JPB2 1677 aa20.25■□□□□ 0.83
SLC6A4-204ENST00000578609 NBPF14Q5TI25 921 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms