RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 RTL1A6NKG5 1358 aa11.73□□□□□ -0.53
CDK5RAP3-208ENST00000578525 HTATSF1O43719 755 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-208ENST00000578525 PTPRCP08575 1304 aa11.73□□□□□ -0.53
CDK5RAP3-208ENST00000578525 NWD1Q149M9 1564 aa11.73□□□□□ -0.53
CDK5RAP3-208ENST00000578525 MTHFSDQ2M296 383 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-208ENST00000578525 RTF1Q92541 710 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-208ENST00000578525 EYA1Q99502 592 aa11.73□□□□□ -0.53
CDK5RAP3-208ENST00000578525 LNPKQ9C0E8 428 aa11.73□□□□□ -0.53
CDK5RAP3-208ENST00000578525 C1orf115Q9H7X2 142 aa11.73□□□□□ -0.53
CDK5RAP3-208ENST00000578525 MFAP1P55081 439 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-208ENST00000578525 NLRP6P59044 892 aa11.72□□□□□ -0.53
CDK5RAP3-208ENST00000578525 ADAMTSL3P82987 1691 aa11.71□□□□□ -0.53
CDK5RAP3-208ENST00000578525 TRHP20396 242 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-208ENST00000578525 HOXC9P31274 260 aa11.71□□□□□ -0.53
CDK5RAP3-208ENST00000578525 KRT24Q2M2I5 525 aa11.71□□□□□ -0.53
CDK5RAP3-208ENST00000578525 BMP2KLQ5H9B9 411 aa11.71□□□□□ -0.53
CDK5RAP3-208ENST00000578525 ANKRD45Q5TZF3 282 aa11.71□□□□□ -0.53
CDK5RAP3-208ENST00000578525 ANKLE2Q86XL3 938 aa11.71□□□□□ -0.53
CDK5RAP3-208ENST00000578525 SIRT2Q8IXJ6 389 aa11.71□□□□□ -0.53
CDK5RAP3-208ENST00000578525 C22orf23Q9BZE7 217 aa11.71□□□□□ -0.53
CDK5RAP3-208ENST00000578525 ADGRL3Q9HAR2 1447 aa11.7□□□□□ -0.54
CDK5RAP3-208ENST00000578525 FOXO3O43524 673 aa11.7□□□□□ -0.54
CDK5RAP3-208ENST00000578525 TSPYL4Q9UJ04 414 aa11.7□□□□□ -0.54
CDK5RAP3-208ENST00000578525 PHF8Q9UPP1 1060 aa11.7□□□□□ -0.54
CDK5RAP3-208ENST00000578525 ATP10DQ9P241 1426 aa11.69□□□□□ -0.54
CDK5RAP3-208ENST00000578525 FAM208AQ9UK61 1670 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-208ENST00000578525 ANKRD44Q8N8A2 993 aa11.69□□□□□ -0.54
CDK5RAP3-208ENST00000578525 TBC1D2Q9BYX2 928 aa11.69□□□□□ -0.54
CDK5RAP3-208ENST00000578525 MSH6P52701 1360 aa11.68□□□□□ -0.54
CDK5RAP3-208ENST00000578525 MAP3K5Q99683 1374 aa11.68□□□□□ -0.54
CDK5RAP3-208ENST00000578525 SOS1Q07889 1333 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-208ENST00000578525 RPAP2Q8IXW5 612 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-208ENST00000578525 ABTB2Q8N961 1025 aa11.68□□□□□ -0.54
CDK5RAP3-208ENST00000578525 DCTPP1Q9H773 170 aa11.68□□□□□ -0.54
CDK5RAP3-208ENST00000578525 NFAT5O94916 1531 aa11.68□□□□□ -0.54
CDK5RAP3-208ENST00000578525 LTN1O94822 1766 aa11.67□□□□□ -0.54
CDK5RAP3-208ENST00000578525 GNAT3A8MTJ3 354 aa11.67□□□□□ -0.54
CDK5RAP3-208ENST00000578525 NUTM2GQ5VZR2 741 aa11.67□□□□□ -0.54
CDK5RAP3-208ENST00000578525 BABAM1Q9NWV8 329 aa11.67□□□□□ -0.54
CDK5RAP3-208ENST00000578525 NPHP4O75161 1426 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-208ENST00000578525 EIF5BO60841 1220 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-208ENST00000578525 RBM25P49756 843 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-208ENST00000578525 MIS18AQ9NYP9 233 aa11.66□□□□□ -0.54
CDK5RAP3-208ENST00000578525 PHRF1Q9P1Y6 1649 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-208ENST00000578525 N4BP2Q86UW6 1770 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-208ENST00000578525 FRAT2O75474 233 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-208ENST00000578525 SLC4A2P04920 1241 aa11.65□□□□□ -0.54
CDK5RAP3-208ENST00000578525 CCT4P50991 539 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-208ENST00000578525 CEP85Q6P2H3 762 aa11.65□□□□□ -0.54
CDK5RAP3-208ENST00000578525 IP6K1Q92551 441 aa11.65□□□□□ -0.54
CDK5RAP3-208ENST00000578525 ANTXR1Q9H6X2 564 aa11.65□□□□□ -0.54
CDK5RAP3-208ENST00000578525 MED1Q15648 1581 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-208ENST00000578525 CDC45O75419 566 aa11.64□□□□□ -0.55
CDK5RAP3-208ENST00000578525 C14orf37Q86TY3 774 aa11.64□□□□□ -0.55
CDK5RAP3-208ENST00000578525 STK31Q9BXU1 1019 aa11.64□□□□□ -0.55
CDK5RAP3-208ENST00000578525 SLKQ9H2G2 1235 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-208ENST00000578525 GSE1Q14687 1217 aa11.63□□□□□ -0.55
CDK5RAP3-208ENST00000578525 CCDC30Q5VVM6 783 aa11.63□□□□□ -0.55
CDK5RAP3-208ENST00000578525 G2E3Q7L622 706 aa11.63□□□□□ -0.55
CDK5RAP3-208ENST00000578525 PLEKHM2Q8IWE5 1019 aa11.63□□□□□ -0.55
CDK5RAP3-208ENST00000578525 HSCBQ8IWL3 235 aa11.63□□□□□ -0.55
CDK5RAP3-208ENST00000578525 KCNH5Q8NCM2 988 aa11.63□□□□□ -0.55
CDK5RAP3-208ENST00000578525 SNX21Q969T3 373 aa11.63□□□□□ -0.55
CDK5RAP3-208ENST00000578525 LTV1Q96GA3 475 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-208ENST00000578525 MEIS3Q99687 375 aa11.63□□□□□ -0.55
CDK5RAP3-208ENST00000578525 BCL11AQ9H165 835 aa11.63□□□□□ -0.55
CDK5RAP3-208ENST00000578525 SLIT3O75094 1523 aa11.63□□□□□ -0.55
CDK5RAP3-208ENST00000578525 PXDNLA1KZ92 1463 aa11.63□□□□□ -0.55
CDK5RAP3-208ENST00000578525 HMMRO75330 724 aa11.62□□□□□ -0.55
CDK5RAP3-208ENST00000578525 TAF7Q15545 349 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-208ENST00000578525 TTC22Q5TAA0 569 aa11.62□□□□□ -0.55
CDK5RAP3-208ENST00000578525 TBC1D9Q6ZT07 1266 aa11.62□□□□□ -0.55
CDK5RAP3-208ENST00000578525 IL17REQ8NFR9 667 aa11.62□□□□□ -0.55
CDK5RAP3-208ENST00000578525 KIF1AQ12756 1690 aa11.62□□□□□ -0.55
CDK5RAP3-208ENST00000578525 LMO7Q8WWI1 1683 aa11.62□□□□□ -0.55
CDK5RAP3-208ENST00000578525 NCOA3Q9Y6Q9 1424 aa11.61□□□□□ -0.55
CDK5RAP3-208ENST00000578525 GSPT1P15170 499 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-208ENST00000578525 ESCO1Q5FWF5 840 aa11.61□□□□□ -0.55
CDK5RAP3-208ENST00000578525 CHMP5Q9NZZ3 219 aa11.61□□□□□ -0.55
CDK5RAP3-208ENST00000578525 KDM3BQ7LBC6 1761 aa11.6□□□□□ -0.55
CDK5RAP3-208ENST00000578525 CAMTA1Q9Y6Y1 1673 aa11.6□□□□□ -0.55
CDK5RAP3-208ENST00000578525 CEMIPQ8WUJ3 1361 aa11.6□□□□□ -0.55
CDK5RAP3-208ENST00000578525 PSME1Q06323 249 aa11.6□□□□□ -0.55
CDK5RAP3-208ENST00000578525 FLIIQ13045 1269 aa11.6□□□□□ -0.55
CDK5RAP3-208ENST00000578525 USHBP1Q8N6Y0 703 aa11.6□□□□□ -0.55
CDK5RAP3-208ENST00000578525 TRPM3Q9HCF6 1732 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-208ENST00000578525 NCAPD2Q15021 1401 aa11.6□□□□□ -0.55
CDK5RAP3-208ENST00000578525 CACNA1FO60840 1977 aa11.59□□□□□ -0.55
CDK5RAP3-208ENST00000578525 SETD1BQ9UPS6 1966 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-208ENST00000578525 F6X3S4 739 aa11.59□□□□□ -0.55
CDK5RAP3-208ENST00000578525 GNAI2P04899 355 aa11.59□□□□□ -0.55
CDK5RAP3-208ENST00000578525 GNAI3P08754 354 aa11.59□□□□□ -0.55
CDK5RAP3-208ENST00000578525 SLC4A10Q6U841 1118 aa11.59□□□□□ -0.55
CDK5RAP3-208ENST00000578525 NBPF6Q5VWK0 638 aa11.58□□□□□ -0.56
CDK5RAP3-208ENST00000578525 NBPF4Q96M43 638 aa11.58□□□□□ -0.56
CDK5RAP3-208ENST00000578525 RGPD2P0DJD1 1756 aa11.58□□□□□ -0.56
CDK5RAP3-208ENST00000578525 OVOS2A0A0G2JMS6 1433 aa11.58□□□□□ -0.56
CDK5RAP3-208ENST00000578525 HOXB7P09629 217 aa11.57□□□□□ -0.56
CDK5RAP3-208ENST00000578525 FKBP5Q13451 457 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-208ENST00000578525 C16orf71Q8IYS4 520 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms