RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 USP25Q9UHP3 1055 aa14.37□□□□□ -0.11
ERBB2-206ENST00000578373 SMC2O95347 1197 aa14.37□□□□□ -0.11
ERBB2-206ENST00000578373 CCDC8Q9H0W5 538 aaPredicted RBP14.37□□□□□ -0.11
ERBB2-206ENST00000578373 TPM2P07951 284 aa14.36□□□□□ -0.11
ERBB2-206ENST00000578373 PDCP20941 246 aa14.36□□□□□ -0.11
ERBB2-206ENST00000578373 RAD21O60216 631 aa14.36□□□□□ -0.11
ERBB2-206ENST00000578373 ME1P48163 572 aa14.36□□□□□ -0.11
ERBB2-206ENST00000578373 NCBP3Q53F19 620 aaKnown RBP14.36□□□□□ -0.11
ERBB2-206ENST00000578373 RRP12Q5JTH9 1297 aaKnown RBP14.36□□□□□ -0.11
ERBB2-206ENST00000578373 KRT85P78386 507 aa14.36□□□□□ -0.11
ERBB2-206ENST00000578373 NUCB1Q02818 461 aa14.36□□□□□ -0.11
ERBB2-206ENST00000578373 BTBD11A6QL63 1104 aa14.36□□□□□ -0.11
ERBB2-206ENST00000578373 SDSP20132 328 aa14.36□□□□□ -0.11
ERBB2-206ENST00000578373 NCKAP5LQ9HCH0 1330 aa14.35□□□□□ -0.11
ERBB2-206ENST00000578373 CEBPAP49715 358 aaPredicted RBP14.35□□□□□ -0.11
ERBB2-206ENST00000578373 JARID2Q92833 1246 aaPredicted RBP14.35□□□□□ -0.11
ERBB2-206ENST00000578373 TCEANC2Q96MN5 208 aa14.35□□□□□ -0.11
ERBB2-206ENST00000578373 MARCH6O60337 910 aa14.35□□□□□ -0.11
ERBB2-206ENST00000578373 CCDC192P0DO97 292 aa14.35□□□□□ -0.11
ERBB2-206ENST00000578373 MPRIPQ6WCQ1 1025 aa14.35□□□□□ -0.11
ERBB2-206ENST00000578373 TFIP11Q9UBB9 837 aaKnown RBP14.35□□□□□ -0.11
ERBB2-206ENST00000578373 FKBP4Q02790 459 aaKnown RBP eCLIP14.35□□□□□ -0.11
ERBB2-206ENST00000578373 FAM177A1Q8N128 213 aaPredicted RBP14.35□□□□□ -0.11
ERBB2-206ENST00000578373 KIF14Q15058 1648 aa14.34□□□□□ -0.11
ERBB2-206ENST00000578373 PZPP20742 1482 aa14.34□□□□□ -0.11
ERBB2-206ENST00000578373 GNAT3A8MTJ3 354 aa14.34□□□□□ -0.11
ERBB2-206ENST00000578373 FLIIQ13045 1269 aa14.34□□□□□ -0.11
ERBB2-206ENST00000578373 CKAP2LQ8IYA6 745 aa14.34□□□□□ -0.11
ERBB2-206ENST00000578373 HDAC1Q13547 482 aaPredicted RBP14.34□□□□□ -0.11
ERBB2-206ENST00000578373 STK38Q15208 465 aa14.34□□□□□ -0.11
ERBB2-206ENST00000578373 LRRFIP1Q32MZ4 808 aaKnown RBP14.34□□□□□ -0.11
ERBB2-206ENST00000578373 VPS53Q5VIR6 699 aa14.34□□□□□ -0.11
ERBB2-206ENST00000578373 NOC3LQ8WTT2 800 aaKnown RBP14.34□□□□□ -0.11
ERBB2-206ENST00000578373 SPATA32Q96LK8 384 aa14.33□□□□□ -0.11
ERBB2-206ENST00000578373 PRDM10Q9NQV6 1147 aa14.33□□□□□ -0.11
ERBB2-206ENST00000578373 RNF123Q5XPI4 1314 aa14.33□□□□□ -0.12
ERBB2-206ENST00000578373 WASLO00401 505 aaPredicted RBP14.33□□□□□ -0.12
ERBB2-206ENST00000578373 GUCY1B3Q02153 619 aa14.33□□□□□ -0.12
ERBB2-206ENST00000578373 ZNF830Q96NB3 372 aaPredicted RBP14.33□□□□□ -0.12
ERBB2-206ENST00000578373 STRN4Q9NRL3 753 aa14.33□□□□□ -0.12
ERBB2-206ENST00000578373 VPS37DQ86XT2 251 aa14.33□□□□□ -0.12
ERBB2-206ENST00000578373 MNS1Q8NEH6 495 aa14.33□□□□□ -0.12
ERBB2-206ENST00000578373 ADGRL1O94910 1474 aa14.33□□□□□ -0.12
ERBB2-206ENST00000578373 ABCC11Q96J66 1382 aa14.33□□□□□ -0.12
ERBB2-206ENST00000578373 PCMTD1Q96MG8 357 aaPredicted RBP14.33□□□□□ -0.12
ERBB2-206ENST00000578373 BRPF1P55201 1214 aaPredicted RBP14.32□□□□□ -0.12
ERBB2-206ENST00000578373 TTC22Q5TAA0 569 aa14.32□□□□□ -0.12
ERBB2-206ENST00000578373 ZGPATQ8N5A5 531 aaKnown RBP14.32□□□□□ -0.12
ERBB2-206ENST00000578373 GOLGA6L1Q8N7Z2 621 aa14.32□□□□□ -0.12
ERBB2-206ENST00000578373 OTUD7AQ8TE49 926 aaPredicted RBP14.32□□□□□ -0.12
ERBB2-206ENST00000578373 RAB11FIP3O75154 756 aa14.31□□□□□ -0.12
ERBB2-206ENST00000578373 KIF1BPQ96EK5 621 aa14.31□□□□□ -0.12
ERBB2-206ENST00000578373 NUP62CLQ9H1M0 184 aa14.31□□□□□ -0.12
ERBB2-206ENST00000578373 KDM2BQ8NHM5 1336 aa14.31□□□□□ -0.12
ERBB2-206ENST00000578373 FOXO3O43524 673 aa14.31□□□□□ -0.12
ERBB2-206ENST00000578373 DHX16O60231 1041 aaKnown RBP14.31□□□□□ -0.12
ERBB2-206ENST00000578373 PTCD1O75127 700 aaKnown RBP14.31□□□□□ -0.12
ERBB2-206ENST00000578373 ATF3P18847 181 aa14.31□□□□□ -0.12
ERBB2-206ENST00000578373 TSR1Q2NL82 804 aaKnown RBP14.31□□□□□ -0.12
ERBB2-206ENST00000578373 POLKQ9UBT6 870 aa14.31□□□□□ -0.12
ERBB2-206ENST00000578373 PROSER2Q86WR7 435 aaPredicted RBP14.3□□□□□ -0.12
ERBB2-206ENST00000578373 ASXL1Q8IXJ9 1541 aa14.3□□□□□ -0.12
ERBB2-206ENST00000578373 ERC1Q8IUD2 1116 aa14.3□□□□□ -0.12
ERBB2-206ENST00000578373 ZBTB40Q9NUA8 1239 aa14.3□□□□□ -0.12
ERBB2-206ENST00000578373 TEX14Q8IWB6 1497 aa14.3□□□□□ -0.12
ERBB2-206ENST00000578373 TMX3Q96JJ7 454 aa14.3□□□□□ -0.12
ERBB2-206ENST00000578373 SAFBQ15424 915 aaKnown RBP eCLIP14.29□□□□□ -0.12
ERBB2-206ENST00000578373 PPP1R42Q7Z4L9 355 aa14.29□□□□□ -0.12
ERBB2-206ENST00000578373 PI4KAP2A4QPH2 592 aa14.29□□□□□ -0.12
ERBB2-206ENST00000578373 VAMP4O75379 141 aa14.29□□□□□ -0.12
ERBB2-206ENST00000578373 LETM1O95202 739 aaPredicted RBP14.29□□□□□ -0.12
ERBB2-206ENST00000578373 PI4KAP1Q8N8J0 262 aa14.29□□□□□ -0.12
ERBB2-206ENST00000578373 CD109Q6YHK3 1445 aa14.29□□□□□ -0.12
ERBB2-206ENST00000578373 TRAPPC8Q9Y2L5 1435 aa14.29□□□□□ -0.12
ERBB2-206ENST00000578373 A0A0U1RQG5 324 aaPredicted RBP14.29□□□□□ -0.12
ERBB2-206ENST00000578373 HCLS1P14317 486 aaPredicted RBP14.29□□□□□ -0.12
ERBB2-206ENST00000578373 G3V3G9 751 aa14.29□□□□□ -0.12
ERBB2-206ENST00000578373 TPM1P09493 284 aa14.29□□□□□ -0.12
ERBB2-206ENST00000578373 DCAF8Q5TAQ9 597 aa14.29□□□□□ -0.12
ERBB2-206ENST00000578373 NECAB1Q8N987 351 aa14.29□□□□□ -0.12
ERBB2-206ENST00000578373 HMGN5P82970 282 aaKnown RBP14.28□□□□□ -0.12
ERBB2-206ENST00000578373 FAM135AQ9P2D6 1515 aa14.28□□□□□ -0.12
ERBB2-206ENST00000578373 ZSCAN23Q3MJ62 389 aa14.28□□□□□ -0.12
ERBB2-206ENST00000578373 MRPL50Q8N5N7 158 aaKnown RBP14.28□□□□□ -0.12
ERBB2-206ENST00000578373 ERICH2A1L162 156 aa14.28□□□□□ -0.12
ERBB2-206ENST00000578373 GLRX3O76003 335 aaKnown RBP14.28□□□□□ -0.12
ERBB2-206ENST00000578373 PKNOX2Q96KN3 472 aa14.28□□□□□ -0.12
ERBB2-206ENST00000578373 TCOF1Q13428 1488 aaKnown RBP14.28□□□□□ -0.12
ERBB2-206ENST00000578373 SKIDA1Q1XH10 827 aa14.27□□□□□ -0.12
ERBB2-206ENST00000578373 KLHL40Q2TBA0 621 aa14.27□□□□□ -0.12
ERBB2-206ENST00000578373 SMC5Q8IY18 1101 aa14.27□□□□□ -0.12
ERBB2-206ENST00000578373 NAT10Q9H0A0 1025 aaKnown RBP14.27□□□□□ -0.12
ERBB2-206ENST00000578373 SYCP2Q9BX26 1530 aa14.27□□□□□ -0.12
ERBB2-206ENST00000578373 HIP1O00291 1037 aa14.27□□□□□ -0.13
ERBB2-206ENST00000578373 TMX4Q9H1E5 349 aaPredicted RBP14.27□□□□□ -0.13
ERBB2-206ENST00000578373 RRAGDQ9NQL2 400 aaPredicted RBP14.27□□□□□ -0.13
ERBB2-206ENST00000578373 TATP17735 454 aaPredicted RBP14.27□□□□□ -0.13
ERBB2-206ENST00000578373 GIMAP6Q6P9H5 292 aa14.27□□□□□ -0.13
ERBB2-206ENST00000578373 PRIM1P49642 420 aaKnown RBP14.26□□□□□ -0.13
ERBB2-206ENST00000578373 PDE1AP54750 535 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms