RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 RTF1Q92541 710 aaKnown RBP18.12■□□□□ 0.49
CUEDC1-206ENST00000577830 WASLO00401 505 aaPredicted RBP18.12■□□□□ 0.49
CUEDC1-206ENST00000577830 NEK4P51957 841 aa18.11■□□□□ 0.49
CUEDC1-206ENST00000577830 SKOR2Q2VWA4 1001 aaPredicted RBP18.11■□□□□ 0.49
CUEDC1-206ENST00000577830 TTC22Q5TAA0 569 aa18.11■□□□□ 0.49
CUEDC1-206ENST00000577830 MAP4K4O95819 1239 aaPredicted RBP18.1■□□□□ 0.49
CUEDC1-206ENST00000577830 TSPYL4Q9UJ04 414 aa18.1■□□□□ 0.49
CUEDC1-206ENST00000577830 G2E3Q7L622 706 aa18.1■□□□□ 0.49
CUEDC1-206ENST00000577830 CIZ1Q9ULV3 898 aaPredicted RBP18.1■□□□□ 0.49
CUEDC1-206ENST00000577830 ST18O60284 1047 aa18.1■□□□□ 0.49
CUEDC1-206ENST00000577830 PREX1Q8TCU6 1659 aa18.1■□□□□ 0.49
CUEDC1-206ENST00000577830 ANO2Q9NQ90 1003 aa18.09■□□□□ 0.49
CUEDC1-206ENST00000577830 MSNP26038 577 aaKnown RBP18.09■□□□□ 0.49
CUEDC1-206ENST00000577830 CLCN1P35523 988 aa18.09■□□□□ 0.49
CUEDC1-206ENST00000577830 RABEP1Q15276 862 aa18.09■□□□□ 0.49
CUEDC1-206ENST00000577830 LARP6Q9BRS8 491 aaKnown RBP18.09■□□□□ 0.49
CUEDC1-206ENST00000577830 A2ML1A8K2U0 1454 aa18.08■□□□□ 0.49
CUEDC1-206ENST00000577830 HSP90AA2PQ14568 343 aaPredicted RBP18.08■□□□□ 0.49
CUEDC1-206ENST00000577830 CCDC61Q9Y6R9 512 aa18.08■□□□□ 0.49
CUEDC1-206ENST00000577830 TMEM131LA2VDJ0 1609 aa18.08■□□□□ 0.48
CUEDC1-206ENST00000577830 EIF4A2Q14240 407 aaKnown RBP18.08■□□□□ 0.48
CUEDC1-206ENST00000577830 ARHGAP45Q92619 1136 aa18.08■□□□□ 0.48
CUEDC1-206ENST00000577830 PTPRMP28827 1452 aa18.08■□□□□ 0.48
CUEDC1-206ENST00000577830 FKBP5Q13451 457 aaPredicted RBP18.08■□□□□ 0.48
CUEDC1-206ENST00000577830 DCTPP1Q9H773 170 aa18.08■□□□□ 0.48
CUEDC1-206ENST00000577830 CLTCQ00610 1675 aaKnown RBP18.07■□□□□ 0.48
CUEDC1-206ENST00000577830 UPF3BQ9BZI7 483 aaKnown RBP18.07■□□□□ 0.48
CUEDC1-206ENST00000577830 ABCC4O15439 1325 aa18.07■□□□□ 0.48
CUEDC1-206ENST00000577830 CEP85Q6P2H3 762 aa18.07■□□□□ 0.48
CUEDC1-206ENST00000577830 LTKP29376 864 aa18.06■□□□□ 0.48
CUEDC1-206ENST00000577830 USP26Q9BXU7 913 aa18.06■□□□□ 0.48
CUEDC1-206ENST00000577830 GDPD2Q9HCC8 539 aa18.06■□□□□ 0.48
CUEDC1-206ENST00000577830 LRRC7Q96NW7 1537 aa18.06■□□□□ 0.48
CUEDC1-206ENST00000577830 IL1RAPL2Q9NP60 686 aa18.06■□□□□ 0.48
CUEDC1-206ENST00000577830 ALKQ9UM73 1620 aa18.06■□□□□ 0.48
CUEDC1-206ENST00000577830 PLCB2Q00722 1185 aa18.06■□□□□ 0.48
CUEDC1-206ENST00000577830 KIF13AQ9H1H9 1805 aa18.06■□□□□ 0.48
CUEDC1-206ENST00000577830 ZFYVE9O95405 1425 aa18.05■□□□□ 0.48
CUEDC1-206ENST00000577830 PPP6R1Q9UPN7 881 aa18.05■□□□□ 0.48
CUEDC1-206ENST00000577830 TNRQ92752 1358 aa18.05■□□□□ 0.48
CUEDC1-206ENST00000577830 RBM33Q96EV2 1170 aaKnown RBP18.05■□□□□ 0.48
CUEDC1-206ENST00000577830 MSH6P52701 1360 aa18.05■□□□□ 0.48
CUEDC1-206ENST00000577830 AMPHP49418 695 aa18.05■□□□□ 0.48
CUEDC1-206ENST00000577830 ARHGEF28Q8N1W1 1705 aaKnown RBP18.04■□□□□ 0.48
CUEDC1-206ENST00000577830 VSIG10Q8N0Z9 540 aa18.04■□□□□ 0.48
CUEDC1-206ENST00000577830 ANKRD44Q8N8A2 993 aa18.04■□□□□ 0.48
CUEDC1-206ENST00000577830 MYO3AQ8NEV4 1616 aa18.04■□□□□ 0.48
CUEDC1-206ENST00000577830 VIRMAQ69YN4 1812 aaKnown RBP18.04■□□□□ 0.48
CUEDC1-206ENST00000577830 RBM10P98175 930 aaKnown RBP18.04■□□□□ 0.48
CUEDC1-206ENST00000577830 SYCE3A1L190 88 aa18.04■□□□□ 0.48
CUEDC1-206ENST00000577830 PTMAP06454 111 aaKnown RBP18.04■□□□□ 0.48
CUEDC1-206ENST00000577830 DDIT3P35638 169 aa18.04■□□□□ 0.48
CUEDC1-206ENST00000577830 HDGFP51858 240 aaKnown RBP18.04■□□□□ 0.48
CUEDC1-206ENST00000577830 STK31Q9BXU1 1019 aa18.04■□□□□ 0.48
CUEDC1-206ENST00000577830 BCL11BQ9C0K0 894 aaPredicted RBP18.04■□□□□ 0.48
CUEDC1-206ENST00000577830 DNAJC5Q9H3Z4 198 aa18.04■□□□□ 0.48
CUEDC1-206ENST00000577830 FAM135BQ49AJ0 1406 aa18.04■□□□□ 0.48
CUEDC1-206ENST00000577830 COL3A1P02461 1466 aaPredicted RBP18.04■□□□□ 0.48
CUEDC1-206ENST00000577830 CD163L1Q9NR16 1453 aa18.04■□□□□ 0.48
CUEDC1-206ENST00000577830 HAP1P54257 671 aaPredicted RBP18.03■□□□□ 0.48
CUEDC1-206ENST00000577830 HMMRO75330 724 aa18.03■□□□□ 0.48
CUEDC1-206ENST00000577830 REC8O95072 547 aa18.03■□□□□ 0.48
CUEDC1-206ENST00000577830 ZNF853P0CG23 659 aa18.03■□□□□ 0.48
CUEDC1-206ENST00000577830 NUCB2P80303 420 aa18.03■□□□□ 0.48
CUEDC1-206ENST00000577830 EIF2S2P20042 333 aaKnown RBP18.03■□□□□ 0.48
CUEDC1-206ENST00000577830 PNPLA6Q8IY17 1366 aa18.02■□□□□ 0.48
CUEDC1-206ENST00000577830 PRIM1P49642 420 aaKnown RBP18.02■□□□□ 0.48
CUEDC1-206ENST00000577830 NGDNQ8NEJ9 315 aaKnown RBP18.02■□□□□ 0.48
CUEDC1-206ENST00000577830 AK9Q5TCS8 1911 aa18.02■□□□□ 0.47
CUEDC1-206ENST00000577830 ZSCAN23Q3MJ62 389 aa18.02■□□□□ 0.47
CUEDC1-206ENST00000577830 ERC2O15083 957 aa18.01■□□□□ 0.47
CUEDC1-206ENST00000577830 RPAP2Q8IXW5 612 aaPredicted RBP18.01■□□□□ 0.47
CUEDC1-206ENST00000577830 ZC3H13Q5T200 1668 aaKnown RBP18■□□□□ 0.47
CUEDC1-206ENST00000577830 KIAA1211Q6ZU35 1233 aa18■□□□□ 0.47
CUEDC1-206ENST00000577830 KLHL40Q2TBA0 621 aa18■□□□□ 0.47
CUEDC1-206ENST00000577830 R3HCC1Q9Y3T6 440 aaKnown RBP18■□□□□ 0.47
CUEDC1-206ENST00000577830 NUTM1Q86Y26 1132 aa18■□□□□ 0.47
CUEDC1-206ENST00000577830 ADGRB2O60241 1585 aa17.99■□□□□ 0.47
CUEDC1-206ENST00000577830 RBSNQ9H1K0 784 aa17.99■□□□□ 0.47
CUEDC1-206ENST00000577830 XPCQ01831 940 aaPredicted RBP17.99■□□□□ 0.47
CUEDC1-206ENST00000577830 DDX54Q8TDD1 881 aaKnown RBP17.99■□□□□ 0.47
CUEDC1-206ENST00000577830 NSFL1CQ9UNZ2 370 aaKnown RBP17.99■□□□□ 0.47
CUEDC1-206ENST00000577830 ACEP12821 1306 aa17.99■□□□□ 0.47
CUEDC1-206ENST00000577830 USHBP1Q8N6Y0 703 aa17.98■□□□□ 0.47
CUEDC1-206ENST00000577830 EID1Q9Y6B2 187 aa17.98■□□□□ 0.47
CUEDC1-206ENST00000577830 PTMSP20962 102 aa17.98■□□□□ 0.47
CUEDC1-206ENST00000577830 PDE1AP54750 535 aa17.98■□□□□ 0.47
CUEDC1-206ENST00000577830 CCDC173Q0VFZ6 552 aa17.98■□□□□ 0.47
CUEDC1-206ENST00000577830 MTHFSDQ2M296 383 aaKnown RBP17.98■□□□□ 0.47
CUEDC1-206ENST00000577830 LMBRD1Q9NUN5 540 aa17.97■□□□□ 0.47
CUEDC1-206ENST00000577830 DHX37Q8IY37 1157 aaKnown RBP17.97■□□□□ 0.47
CUEDC1-206ENST00000577830 PALD1Q9ULE6 856 aa17.97■□□□□ 0.47
CUEDC1-206ENST00000577830 PRR36Q9H6K5 1346 aa17.97■□□□□ 0.47
CUEDC1-206ENST00000577830 GNAI2P04899 355 aa17.96■□□□□ 0.47
CUEDC1-206ENST00000577830 OS9Q13438 667 aaPredicted RBP17.96■□□□□ 0.47
CUEDC1-206ENST00000577830 FAM13BQ9NYF5 915 aa17.96■□□□□ 0.47
CUEDC1-206ENST00000577830 ARHGEF40Q8TER5 1519 aa17.96■□□□□ 0.47
CUEDC1-206ENST00000577830 TMX3Q96JJ7 454 aa17.96■□□□□ 0.47
CUEDC1-206ENST00000577830 PNMA6EA0A0J9YXQ4 647 aa17.96■□□□□ 0.46
CUEDC1-206ENST00000577830 LRRFIP2Q9Y608 721 aaKnown RBP17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms