RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 DOT1LQ8TEK3 1739 aa20.35■□□□□ 0.85
PPP4R1-206ENST00000577779 PCNTO95613 3336 aa20.35■□□□□ 0.85
PPP4R1-206ENST00000577779 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.34■□□□□ 0.851e-7■■□□□ 14.3
PPP4R1-206ENST00000577779 KIF3CO14782 793 aa20.33■□□□□ 0.85
PPP4R1-206ENST00000577779 NSD2O96028 1365 aa20.33■□□□□ 0.84
PPP4R1-206ENST00000577779 USP31Q70CQ4 1352 aa20.33■□□□□ 0.84
PPP4R1-206ENST00000577779 MON2Q7Z3U7 1717 aa20.31■□□□□ 0.84
PPP4R1-206ENST00000577779 USP54Q70EL1 1684 aa20.31■□□□□ 0.84
PPP4R1-206ENST00000577779 NME9Q86XW9 330 aa20.3■□□□□ 0.84
PPP4R1-206ENST00000577779 DNAJC5GQ8N7S2 189 aa20.3■□□□□ 0.84
PPP4R1-206ENST00000577779 WWC3Q9ULE0 1092 aa20.29■□□□□ 0.84
PPP4R1-206ENST00000577779 USP47Q96K76 1375 aa20.29■□□□□ 0.84
PPP4R1-206ENST00000577779 IGSF1Q8N6C5 1336 aa20.27■□□□□ 0.84
PPP4R1-206ENST00000577779 FAM208AQ9UK61 1670 aaKnown RBP20.27■□□□□ 0.84
PPP4R1-206ENST00000577779 FLAD1Q8NFF5 587 aa20.27■□□□□ 0.84
PPP4R1-206ENST00000577779 LTV1Q96GA3 475 aaPredicted RBP20.27■□□□□ 0.84
PPP4R1-206ENST00000577779 C5P01031 1676 aa20.26■□□□□ 0.83
PPP4R1-206ENST00000577779 CAPN15O75808 1086 aa20.25■□□□□ 0.83
PPP4R1-206ENST00000577779 TOMM70O94826 608 aa20.24■□□□□ 0.83
PPP4R1-206ENST00000577779 ZCRB1Q8TBF4 217 aaKnown RBP20.24■□□□□ 0.83
PPP4R1-206ENST00000577779 IP6K1Q92551 441 aa20.24■□□□□ 0.83
PPP4R1-206ENST00000577779 SBNO2Q9Y2G9 1366 aa20.23■□□□□ 0.83
PPP4R1-206ENST00000577779 COL13A1Q5TAT6 717 aaPredicted RBP20.23■□□□□ 0.83
PPP4R1-206ENST00000577779 HMGB2P26583 209 aaKnown RBP20.21■□□□□ 0.83
PPP4R1-206ENST00000577779 WDR90Q96KV7 1748 aa20.19■□□□□ 0.82
PPP4R1-206ENST00000577779 CD163L1Q9NR16 1453 aa20.19■□□□□ 0.82
PPP4R1-206ENST00000577779 TAF1LQ8IZX4 1826 aa20.19■□□□□ 0.82
PPP4R1-206ENST00000577779 MEGF6O75095 1541 aa20.18■□□□□ 0.82
PPP4R1-206ENST00000577779 CICQ96RK0 1608 aaPredicted RBP20.18■□□□□ 0.82
PPP4R1-206ENST00000577779 HDGFL2Q7Z4V5 671 aaPredicted RBP20.18■□□□□ 0.82
PPP4R1-206ENST00000577779 TMC1Q8TDI8 760 aa20.17■□□□□ 0.82
PPP4R1-206ENST00000577779 AK7Q96M32 723 aa20.17■□□□□ 0.82
PPP4R1-206ENST00000577779 EDC4Q6P2E9 1401 aaKnown RBP20.17■□□□□ 0.82
PPP4R1-206ENST00000577779 RGPD2P0DJD1 1756 aa20.16■□□□□ 0.82
PPP4R1-206ENST00000577779 TNS4Q8IZW8 715 aa20.16■□□□□ 0.82
PPP4R1-206ENST00000577779 KLRG1Q96E93 195 aa20.16■□□□□ 0.82
PPP4R1-206ENST00000577779 ROCK2O75116 1388 aaKnown RBP20.16■□□□□ 0.82
PPP4R1-206ENST00000577779 PALLDQ8WX93 1383 aa20.16■□□□□ 0.82
PPP4R1-206ENST00000577779 C4BP0C0L5 1744 aa20.16■□□□□ 0.82
PPP4R1-206ENST00000577779 PHF14O94880 888 aa20.15■□□□□ 0.82
PPP4R1-206ENST00000577779 AMIGO3Q86WK7 504 aa20.14■□□□□ 0.81
PPP4R1-206ENST00000577779 NMRK2Q9NPI5 230 aa20.14■□□□□ 0.81
PPP4R1-206ENST00000577779 TOGARAM1Q9Y4F4 1720 aa20.13■□□□□ 0.81
PPP4R1-206ENST00000577779 HOXC9P31274 260 aa20.13■□□□□ 0.81
PPP4R1-206ENST00000577779 PRELPP51888 382 aa20.13■□□□□ 0.81
PPP4R1-206ENST00000577779 HTRA3P83110 453 aa20.13■□□□□ 0.81
PPP4R1-206ENST00000577779 JMYQ8N9B5 988 aa20.13■□□□□ 0.81
PPP4R1-206ENST00000577779 L3MBTL2Q969R5 705 aa20.13■□□□□ 0.81
PPP4R1-206ENST00000577779 NSD3Q9BZ95 1437 aa20.12■□□□□ 0.81
PPP4R1-206ENST00000577779 UBR3Q6ZT12 1888 aa20.12■□□□□ 0.81
PPP4R1-206ENST00000577779 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.12■□□□□ 0.81
PPP4R1-206ENST00000577779 AMPHP49418 695 aa20.12■□□□□ 0.81
PPP4R1-206ENST00000577779 SMIM5Q71RC9 77 aa20.12■□□□□ 0.81
PPP4R1-206ENST00000577779 RBM46Q8TBY0 533 aaKnown RBP20.12■□□□□ 0.81
PPP4R1-206ENST00000577779 CGNL1Q0VF96 1302 aa20.11■□□□□ 0.81
PPP4R1-206ENST00000577779 MAP3K19Q56UN5 1328 aa20.11■□□□□ 0.81
PPP4R1-206ENST00000577779 MPRIPQ6WCQ1 1025 aa20.11■□□□□ 0.81
PPP4R1-206ENST00000577779 C16orf71Q8IYS4 520 aaPredicted RBP20.11■□□□□ 0.81
PPP4R1-206ENST00000577779 SLC12A5Q9H2X9 1139 aa20.11■□□□□ 0.81
PPP4R1-206ENST00000577779 TERF2IPQ9NYB0 399 aa20.11■□□□□ 0.81
PPP4R1-206ENST00000577779 A0A1W2PP64 1363 aa20.09■□□□□ 0.81
PPP4R1-206ENST00000577779 PPP4R3CPQ6ZMV5 832 aa20.09■□□□□ 0.81
PPP4R1-206ENST00000577779 RAPGEF4Q8WZA2 1011 aa20.09■□□□□ 0.81
PPP4R1-206ENST00000577779 BCS1LQ9Y276 419 aa20.09■□□□□ 0.81
PPP4R1-206ENST00000577779 PXDNLA1KZ92 1463 aa20.08■□□□□ 0.81
PPP4R1-206ENST00000577779 SSFA2P28290 1259 aa20.08■□□□□ 0.81
PPP4R1-206ENST00000577779 NBPF6Q5VWK0 638 aa20.08■□□□□ 0.81
PPP4R1-206ENST00000577779 ARHGAP27Q6ZUM4 889 aa20.08■□□□□ 0.81
PPP4R1-206ENST00000577779 USHBP1Q8N6Y0 703 aa20.08■□□□□ 0.81
PPP4R1-206ENST00000577779 SMARCC1Q92922 1105 aaPredicted RBP20.08■□□□□ 0.81
PPP4R1-206ENST00000577779 NBPF4Q96M43 638 aa20.08■□□□□ 0.81
PPP4R1-206ENST00000577779 COG3Q96JB2 828 aa20.07■□□□□ 0.8
PPP4R1-206ENST00000577779 PCDH11XQ9BZA7 1347 aa20.06■□□□□ 0.8
PPP4R1-206ENST00000577779 PCDH11YQ9BZA8 1340 aa20.06■□□□□ 0.8
PPP4R1-206ENST00000577779 N4BP2Q86UW6 1770 aaPredicted RBP20.06■□□□□ 0.8
PPP4R1-206ENST00000577779 TATP17735 454 aaPredicted RBP20.06■□□□□ 0.8
PPP4R1-206ENST00000577779 FBLN1P23142 703 aa20.06■□□□□ 0.8
PPP4R1-206ENST00000577779 FSTL1Q12841 308 aa20.06■□□□□ 0.8
PPP4R1-206ENST00000577779 KIF13BQ9NQT8 1826 aa20.04■□□□□ 0.8
PPP4R1-206ENST00000577779 A0A0G2JLW4 131 aa20.04■□□□□ 0.8
PPP4R1-206ENST00000577779 MMP10P09238 476 aa20.04■□□□□ 0.8
PPP4R1-206ENST00000577779 TGFB2P61812 414 aa20.04■□□□□ 0.8
PPP4R1-206ENST00000577779 KIAA1551Q9HCM1 1747 aa20.04■□□□□ 0.8
PPP4R1-206ENST00000577779 ITGB4P16144 1822 aa20.04■□□□□ 0.8
PPP4R1-206ENST00000577779 RTL1A6NKG5 1358 aa20.03■□□□□ 0.8
PPP4R1-206ENST00000577779 SMG6Q86US8 1419 aaKnown RBP20.02■□□□□ 0.8
PPP4R1-206ENST00000577779 LINC00116Q8NCU8 138 aa20.02■□□□□ 0.8
PPP4R1-206ENST00000577779 PLEKHG2Q9H7P9 1386 aa20.01■□□□□ 0.79
PPP4R1-206ENST00000577779 GNPATO15228 680 aa20.01■□□□□ 0.79
PPP4R1-206ENST00000577779 FCHSD2O94868 740 aa20.01■□□□□ 0.79
PPP4R1-206ENST00000577779 C9orf131Q5VYM1 1079 aa20.01■□□□□ 0.79
PPP4R1-206ENST00000577779 CYP27B1O15528 508 aa20■□□□□ 0.79
PPP4R1-206ENST00000577779 PIGBQ92521 554 aa20■□□□□ 0.79
PPP4R1-206ENST00000577779 KDM2BQ8NHM5 1336 aa20■□□□□ 0.79
PPP4R1-206ENST00000577779 LOC102724428A0A0B4J2F2 783 aa19.99■□□□□ 0.79
PPP4R1-206ENST00000577779 SIK1P57059 783 aa19.99■□□□□ 0.79
PPP4R1-206ENST00000577779 RRS1Q15050 365 aaKnown RBP19.99■□□□□ 0.79
PPP4R1-206ENST00000577779 MAP2P11137 1827 aaKnown RBP19.99■□□□□ 0.79
PPP4R1-206ENST00000577779 KCPQ6ZWJ8 1503 aa19.98■□□□□ 0.79
PPP4R1-206ENST00000577779 DPEP1P16444 411 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms