RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 UQCRHLA0A096LP55 91 aa12.98□□□□□ -0.33
RNF43-203ENST00000577716 UQCRHP07919 91 aa12.98□□□□□ -0.33
RNF43-203ENST00000577716 FBLN1P23142 703 aa12.98□□□□□ -0.33
RNF43-203ENST00000577716 DUOX2Q9NRD8 1548 aa12.98□□□□□ -0.33
RNF43-203ENST00000577716 IL16Q14005 1332 aa12.98□□□□□ -0.33
RNF43-203ENST00000577716 STK38Q15208 465 aa12.97□□□□□ -0.33
RNF43-203ENST00000577716 KIF1BPQ96EK5 621 aa12.97□□□□□ -0.33
RNF43-203ENST00000577716 ZSCAN31Q96LW9 406 aaPredicted RBP12.97□□□□□ -0.33
RNF43-203ENST00000577716 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
RNF43-203ENST00000577716 TARBP1Q13395 1621 aaKnown RBP12.97□□□□□ -0.33
RNF43-203ENST00000577716 KDM4AO75164 1064 aa12.97□□□□□ -0.33
RNF43-203ENST00000577716 FERMT3Q86UX7 667 aa12.97□□□□□ -0.33
RNF43-203ENST00000577716 SPINK5Q9NQ38 1064 aaPredicted RBP12.97□□□□□ -0.33
RNF43-203ENST00000577716 KDM5BQ9UGL1 1544 aa12.97□□□□□ -0.33
RNF43-203ENST00000577716 GNAT3A8MTJ3 354 aa12.97□□□□□ -0.33
RNF43-203ENST00000577716 RRP9O43818 475 aaKnown RBP12.97□□□□□ -0.33
RNF43-203ENST00000577716 SMC2O95347 1197 aa12.97□□□□□ -0.33
RNF43-203ENST00000577716 BAG4O95429 457 aaKnown RBP12.97□□□□□ -0.33
RNF43-203ENST00000577716 ATP2B1P20020 1258 aa12.97□□□□□ -0.33
RNF43-203ENST00000577716 CASTP20810 708 aaKnown RBP12.97□□□□□ -0.33
RNF43-203ENST00000577716 ARGLU1Q9NWB6 273 aaPredicted RBP12.97□□□□□ -0.33
RNF43-203ENST00000577716 OLFM4Q6UX06 510 aa12.96□□□□□ -0.33
RNF43-203ENST00000577716 ZNF396Q96N95 335 aaPredicted RBP12.96□□□□□ -0.33
RNF43-203ENST00000577716 MBIPQ9NS73 344 aa12.96□□□□□ -0.33
RNF43-203ENST00000577716 FAM83GA6ND36 823 aa12.96□□□□□ -0.33
RNF43-203ENST00000577716 NUCB1Q02818 461 aa12.96□□□□□ -0.33
RNF43-203ENST00000577716 RNF123Q5XPI4 1314 aa12.96□□□□□ -0.33
RNF43-203ENST00000577716 SEC24BO95487 1268 aa12.96□□□□□ -0.34
RNF43-203ENST00000577716 ME1P48163 572 aa12.96□□□□□ -0.34
RNF43-203ENST00000577716 VPS37DQ86XT2 251 aa12.96□□□□□ -0.34
RNF43-203ENST00000577716 SPATA32Q96LK8 384 aa12.96□□□□□ -0.34
RNF43-203ENST00000577716 NUP62CLQ9H1M0 184 aa12.96□□□□□ -0.34
RNF43-203ENST00000577716 ADGRL2O95490 1459 aa12.96□□□□□ -0.34
RNF43-203ENST00000577716 GLRX3O76003 335 aaKnown RBP12.95□□□□□ -0.34
RNF43-203ENST00000577716 ATF3P18847 181 aa12.95□□□□□ -0.34
RNF43-203ENST00000577716 TEX35Q5T0J7 233 aa12.95□□□□□ -0.34
RNF43-203ENST00000577716 PCMTD1Q96MG8 357 aaPredicted RBP12.95□□□□□ -0.34
RNF43-203ENST00000577716 MYL6BP14649 208 aa12.95□□□□□ -0.34
RNF43-203ENST00000577716 PDILTQ8N807 584 aa12.95□□□□□ -0.34
RNF43-203ENST00000577716 PPP6R1Q9UPN7 881 aa12.95□□□□□ -0.34
RNF43-203ENST00000577716 FYB1O15117 783 aa12.95□□□□□ -0.34
RNF43-203ENST00000577716 DHX16O60231 1041 aaKnown RBP12.95□□□□□ -0.34
RNF43-203ENST00000577716 CCDC83Q8IWF9 413 aa12.95□□□□□ -0.34
RNF43-203ENST00000577716 CARD14Q9BXL6 1004 aa12.95□□□□□ -0.34
RNF43-203ENST00000577716 POLR3AO14802 1390 aaPredicted RBP12.95□□□□□ -0.34
RNF43-203ENST00000577716 THEMISQ8N1K5 641 aaPredicted RBP12.95□□□□□ -0.34
RNF43-203ENST00000577716 BTBD11A6QL63 1104 aa12.94□□□□□ -0.34
RNF43-203ENST00000577716 WASLO00401 505 aaPredicted RBP12.94□□□□□ -0.34
RNF43-203ENST00000577716 XRCC6P12956 609 aaKnown RBP eCLIP12.94□□□□□ -0.342e-6■□□□□ 8.9
RNF43-203ENST00000577716 ARHGEF12Q9NZN5 1544 aa12.94□□□□□ -0.34
RNF43-203ENST00000577716 DDX54Q8TDD1 881 aaKnown RBP12.94□□□□□ -0.34
RNF43-203ENST00000577716 LRRFIP2Q9Y608 721 aaKnown RBP12.94□□□□□ -0.34
RNF43-203ENST00000577716 KDM6BO15054 1643 aa12.94□□□□□ -0.34
RNF43-203ENST00000577716 TATP17735 454 aaPredicted RBP12.94□□□□□ -0.34
RNF43-203ENST00000577716 GDPD2Q9HCC8 539 aa12.94□□□□□ -0.34
RNF43-203ENST00000577716 PANK2Q9BZ23 570 aa12.93□□□□□ -0.34
RNF43-203ENST00000577716 KLHL40Q2TBA0 621 aa12.93□□□□□ -0.34
RNF43-203ENST00000577716 ANKRD36BQ8N2N9 1353 aa12.93□□□□□ -0.34
RNF43-203ENST00000577716 CCDC47Q96A33 483 aaKnown RBP12.93□□□□□ -0.34
RNF43-203ENST00000577716 TMX4Q9H1E5 349 aaPredicted RBP12.93□□□□□ -0.34
RNF43-203ENST00000577716 UHRF1BP1Q6BDS2 1440 aa12.93□□□□□ -0.34
RNF43-203ENST00000577716 TTC22Q5TAA0 569 aa12.93□□□□□ -0.34
RNF43-203ENST00000577716 CCDC70Q6NSX1 233 aa12.93□□□□□ -0.34
RNF43-203ENST00000577716 PRPF40BQ6NWY9 871 aaKnown RBP12.93□□□□□ -0.34
RNF43-203ENST00000577716 ARHGAP45Q92619 1136 aa12.93□□□□□ -0.34
RNF43-203ENST00000577716 PIK3C2GO75747 1445 aa12.93□□□□□ -0.34
RNF43-203ENST00000577716 XPCQ01831 940 aaPredicted RBP12.92□□□□□ -0.34
RNF43-203ENST00000577716 VPS53Q5VIR6 699 aa12.92□□□□□ -0.34
RNF43-203ENST00000577716 TBC1D2BQ9UPU7 963 aa12.92□□□□□ -0.34
RNF43-203ENST00000577716 PTPRCP08575 1304 aa12.92□□□□□ -0.34
RNF43-203ENST00000577716 G3V3G9 751 aa12.92□□□□□ -0.34
RNF43-203ENST00000577716 RAB11FIP3O75154 756 aa12.92□□□□□ -0.34
RNF43-203ENST00000577716 TAF7Q15545 349 aaPredicted RBP12.92□□□□□ -0.34
RNF43-203ENST00000577716 DCAF8Q5TAQ9 597 aa12.92□□□□□ -0.34
RNF43-203ENST00000577716 CCDC112Q8NEF3 446 aa12.92□□□□□ -0.34
RNF43-203ENST00000577716 FLIIQ13045 1269 aa12.92□□□□□ -0.34
RNF43-203ENST00000577716 FILIP1Q7Z7B0 1213 aa12.92□□□□□ -0.34
RNF43-203ENST00000577716 ASXL2Q76L83 1435 aa12.92□□□□□ -0.34
RNF43-203ENST00000577716 MAP3K11Q16584 847 aa12.92□□□□□ -0.34
RNF43-203ENST00000577716 TSHZ3Q63HK5 1081 aa12.92□□□□□ -0.34
RNF43-203ENST00000577716 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
RNF43-203ENST00000577716 KRT32Q14532 448 aa12.91□□□□□ -0.34
RNF43-203ENST00000577716 DDX11Q96FC9 970 aa12.91□□□□□ -0.34
RNF43-203ENST00000577716 CFAP45Q9UL16 551 aa12.91□□□□□ -0.34
RNF43-203ENST00000577716 SPATA31E1Q6ZUB1 1445 aa12.91□□□□□ -0.34
RNF43-203ENST00000577716 CCDC158Q5M9N0 1113 aa12.91□□□□□ -0.34
RNF43-203ENST00000577716 LARP6Q9BRS8 491 aaKnown RBP12.91□□□□□ -0.34
RNF43-203ENST00000577716 A2MP01023 1474 aa12.91□□□□□ -0.34
RNF43-203ENST00000577716 CEP170Q5SW79 1584 aa12.9□□□□□ -0.34
RNF43-203ENST00000577716 PDE4CQ08493 712 aa12.9□□□□□ -0.34
RNF43-203ENST00000577716 SART3Q15020 963 aaKnown RBP12.9□□□□□ -0.34
RNF43-203ENST00000577716 AMOTL1Q8IY63 956 aa12.9□□□□□ -0.34
RNF43-203ENST00000577716 PDIA4P13667 645 aaKnown RBP12.9□□□□□ -0.34
RNF43-203ENST00000577716 SDSP20132 328 aa12.9□□□□□ -0.34
RNF43-203ENST00000577716 CCDC183Q5T5S1 534 aa12.9□□□□□ -0.34
RNF43-203ENST00000577716 JMYQ8N9B5 988 aa12.9□□□□□ -0.34
RNF43-203ENST00000577716 MEIS3Q99687 375 aa12.9□□□□□ -0.34
RNF43-203ENST00000577716 USP25Q9UHP3 1055 aa12.9□□□□□ -0.34
RNF43-203ENST00000577716 XBP1P17861 261 aa12.9□□□□□ -0.34
RNF43-203ENST00000577716 PROSER2Q86WR7 435 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms