RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 USP17L8P0C7I0 530 aa6.92□□□□□ -1.3
VAPA-203ENST00000577539 PHLDB3Q6NSJ2 640 aa6.92□□□□□ -1.3
VAPA-203ENST00000577539 CENPJQ9HC77 1338 aaPredicted RBP6.92□□□□□ -1.3
VAPA-203ENST00000577539 WDR7Q9Y4E6 1490 aa6.92□□□□□ -1.3
VAPA-203ENST00000577539 BLMP54132 1417 aaPredicted RBP6.92□□□□□ -1.3
VAPA-203ENST00000577539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.92□□□□□ -1.3
VAPA-203ENST00000577539 HSP90B1P14625 803 aaKnown RBP6.92□□□□□ -1.3
VAPA-203ENST00000577539 FRAT1Q92837 279 aaPredicted RBP6.92□□□□□ -1.3
VAPA-203ENST00000577539 BACH2Q9BYV9 841 aa6.92□□□□□ -1.3
VAPA-203ENST00000577539 RTEL1-TNFRSF6BF6WH68 1400 aa6.91□□□□□ -1.3
VAPA-203ENST00000577539 BCAR3O75815 825 aa6.91□□□□□ -1.3
VAPA-203ENST00000577539 CARD14Q9BXL6 1004 aa6.91□□□□□ -1.3
VAPA-203ENST00000577539 STK26Q9P289 416 aa6.91□□□□□ -1.3
VAPA-203ENST00000577539 METRNQ9UJH8 293 aa6.91□□□□□ -1.3
VAPA-203ENST00000577539 SLFN5Q08AF3 891 aa6.91□□□□□ -1.3
VAPA-203ENST00000577539 SLC10A3P09131 477 aa6.91□□□□□ -1.3
VAPA-203ENST00000577539 POTEEQ6S8J3 1075 aa6.91□□□□□ -1.3
VAPA-203ENST00000577539 SHROOM2Q13796 1616 aa6.91□□□□□ -1.3
VAPA-203ENST00000577539 RAD21O60216 631 aa6.9□□□□□ -1.3
VAPA-203ENST00000577539 UGGT1Q9NYU2 1555 aa6.9□□□□□ -1.3
VAPA-203ENST00000577539 E9PCH4 1651 aa6.9□□□□□ -1.3
VAPA-203ENST00000577539 NUDT7P0C024 238 aa6.9□□□□□ -1.3
VAPA-203ENST00000577539 CTDSPL2Q05D32 466 aa6.9□□□□□ -1.3
VAPA-203ENST00000577539 PRPF38BQ5VTL8 546 aaKnown RBP6.9□□□□□ -1.3
VAPA-203ENST00000577539 FOXD4L5Q5VV16 416 aaPredicted RBP6.9□□□□□ -1.3
VAPA-203ENST00000577539 FOXD4L4Q8WXT5 416 aaPredicted RBP6.9□□□□□ -1.3
VAPA-203ENST00000577539 UHRF1BP1LA0JNW5 1464 aa6.9□□□□□ -1.31
VAPA-203ENST00000577539 CFAP99D6REC4 459 aa6.9□□□□□ -1.31
VAPA-203ENST00000577539 ASXL1Q8IXJ9 1541 aa6.9□□□□□ -1.31
VAPA-203ENST00000577539 E9PSI1 815 aa6.89□□□□□ -1.31
VAPA-203ENST00000577539 HOXA2O43364 376 aa6.89□□□□□ -1.31
VAPA-203ENST00000577539 RAPGEF3O95398 923 aa6.89□□□□□ -1.31
VAPA-203ENST00000577539 SLC4A3P48751 1232 aa6.89□□□□□ -1.31
VAPA-203ENST00000577539 CENPQQ7L2Z9 268 aaPredicted RBP6.89□□□□□ -1.31
VAPA-203ENST00000577539 ZNF710Q8N1W2 664 aa6.89□□□□□ -1.31
VAPA-203ENST00000577539 SLC39A7Q92504 469 aa6.89□□□□□ -1.31
VAPA-203ENST00000577539 NOS1P29475 1434 aa6.89□□□□□ -1.31
VAPA-203ENST00000577539 ASXL2Q76L83 1435 aa6.89□□□□□ -1.31
VAPA-203ENST00000577539 PTPRTO14522 1441 aa6.89□□□□□ -1.31
VAPA-203ENST00000577539 NEFMP07197 916 aa6.89□□□□□ -1.31
VAPA-203ENST00000577539 GUCA2AQ02747 115 aa6.89□□□□□ -1.31
VAPA-203ENST00000577539 ATP7AQ04656 1500 aa6.89□□□□□ -1.31
VAPA-203ENST00000577539 ZFYVE16Q7Z3T8 1539 aa6.89□□□□□ -1.31
VAPA-203ENST00000577539 C7P10643 843 aa6.89□□□□□ -1.31
VAPA-203ENST00000577539 CFAP53Q96M91 514 aa6.89□□□□□ -1.31
VAPA-203ENST00000577539 BCL2L13Q9BXK5 485 aa6.89□□□□□ -1.31
VAPA-203ENST00000577539 TRPM2O94759 1503 aa6.88□□□□□ -1.31
VAPA-203ENST00000577539 MFAP1P55081 439 aaKnown RBP6.88□□□□□ -1.31
VAPA-203ENST00000577539 PRR7Q8TB68 274 aa6.88□□□□□ -1.31
VAPA-203ENST00000577539 BCL2L12Q9HB09 334 aa6.88□□□□□ -1.31
VAPA-203ENST00000577539 ZMYM4Q5VZL5 1548 aa6.88□□□□□ -1.31
VAPA-203ENST00000577539 U2AF1L5P0DN76 240 aaPredicted RBP6.88□□□□□ -1.31
VAPA-203ENST00000577539 CDK11BP21127 795 aaKnown RBP6.88□□□□□ -1.31
VAPA-203ENST00000577539 MTHFSP49914 203 aa6.88□□□□□ -1.31
VAPA-203ENST00000577539 U2AF1Q01081 240 aaKnown RBP eCLIP6.88□□□□□ -1.31
VAPA-203ENST00000577539 ARSIQ5FYB1 569 aa6.88□□□□□ -1.31
VAPA-203ENST00000577539 CLTCL1P53675 1640 aa6.88□□□□□ -1.31
VAPA-203ENST00000577539 U2SURPO15042 1029 aaKnown RBP6.88□□□□□ -1.31
VAPA-203ENST00000577539 PANK1Q8TE04 598 aa6.88□□□□□ -1.31
VAPA-203ENST00000577539 NSD3Q9BZ95 1437 aa6.87□□□□□ -1.31
VAPA-203ENST00000577539 NUDT18Q6ZVK8 323 aa6.87□□□□□ -1.31
VAPA-203ENST00000577539 PBXIP1Q96AQ6 731 aa6.87□□□□□ -1.31
VAPA-203ENST00000577539 GZF1Q9H116 711 aaPredicted RBP6.87□□□□□ -1.31
VAPA-203ENST00000577539 MADDQ8WXG6 1647 aa6.87□□□□□ -1.31
VAPA-203ENST00000577539 UNCXA6NJT0 531 aa6.87□□□□□ -1.31
VAPA-203ENST00000577539 TCP11L2Q8N4U5 519 aa6.87□□□□□ -1.31
VAPA-203ENST00000577539 PIK3C2GO75747 1445 aa6.87□□□□□ -1.31
VAPA-203ENST00000577539 INSRP06213 1382 aa6.87□□□□□ -1.31
VAPA-203ENST00000577539 AEBP1Q8IUX7 1158 aa6.87□□□□□ -1.31
VAPA-203ENST00000577539 CCDC97Q96F63 343 aaPredicted RBP6.87□□□□□ -1.31
VAPA-203ENST00000577539 PPP1R12CQ9BZL4 782 aa6.87□□□□□ -1.31
VAPA-203ENST00000577539 LHX6Q9UPM6 363 aa6.87□□□□□ -1.31
VAPA-203ENST00000577539 LAMC1P11047 1609 aa6.87□□□□□ -1.31
VAPA-203ENST00000577539 ZNF521Q96K83 1311 aa6.86□□□□□ -1.31
VAPA-203ENST00000577539 WWC1Q8IX03 1113 aa6.86□□□□□ -1.31
VAPA-203ENST00000577539 ZNF454Q8N9F8 522 aa6.86□□□□□ -1.31
VAPA-203ENST00000577539 CFAP65Q6ZU64 1925 aaKnown RBP6.86□□□□□ -1.31
VAPA-203ENST00000577539 CGNL1Q0VF96 1302 aa6.86□□□□□ -1.31
VAPA-203ENST00000577539 CD109Q6YHK3 1445 aa6.86□□□□□ -1.31
VAPA-203ENST00000577539 GCGRP47871 477 aa6.86□□□□□ -1.31
VAPA-203ENST00000577539 HDGFL1Q5TGJ6 251 aa6.86□□□□□ -1.31
VAPA-203ENST00000577539 C14orf93Q9H972 538 aaKnown RBP6.86□□□□□ -1.31
VAPA-203ENST00000577539 POGKQ9P215 609 aa6.86□□□□□ -1.31
VAPA-203ENST00000577539 CLASP1Q7Z460 1538 aa6.86□□□□□ -1.31
VAPA-203ENST00000577539 RUNDC1Q96C34 613 aa6.86□□□□□ -1.31
VAPA-203ENST00000577539 ERVK-7P63135 1459 aa6.86□□□□□ -1.31
VAPA-203ENST00000577539 ZMIZ1Q9ULJ6 1067 aa6.85□□□□□ -1.31
VAPA-203ENST00000577539 EVC2Q86UK5 1308 aa6.85□□□□□ -1.31
VAPA-203ENST00000577539 LRRN4Q8WUT4 740 aa6.85□□□□□ -1.31
VAPA-203ENST00000577539 NPC1L1Q9UHC9 1359 aa6.85□□□□□ -1.31
VAPA-203ENST00000577539 PALM3A6NDB9 673 aaPredicted RBP6.85□□□□□ -1.31
VAPA-203ENST00000577539 HAX1O00165 279 aa6.85□□□□□ -1.31
VAPA-203ENST00000577539 PPM1GO15355 546 aaPredicted RBP6.85□□□□□ -1.31
VAPA-203ENST00000577539 BRD1O95696 1058 aa6.85□□□□□ -1.31
VAPA-203ENST00000577539 ABL2P42684 1182 aa6.85□□□□□ -1.31
VAPA-203ENST00000577539 GGNBP2Q9H3C7 697 aa6.85□□□□□ -1.31
VAPA-203ENST00000577539 NKTRP30414 1462 aaKnown RBP6.84□□□□□ -1.31
VAPA-203ENST00000577539 SPHKAPQ2M3C7 1700 aa6.84□□□□□ -1.31
VAPA-203ENST00000577539 KDM2BQ8NHM5 1336 aa6.84□□□□□ -1.31
VAPA-203ENST00000577539 FAM69CQ0P6D2 419 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms