RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.4■■□□□ 1.82
SCO1-202ENST00000577335 TRIM37O94972 964 aa26.39■■□□□ 1.82
SCO1-202ENST00000577335 RALBP1Q15311 655 aa26.38■■□□□ 1.81
SCO1-202ENST00000577335 BAG6P46379 1132 aa26.37■■□□□ 1.81
SCO1-202ENST00000577335 DDX54Q8TDD1 881 aaKnown RBP26.37■■□□□ 1.81
SCO1-202ENST00000577335 SPG7Q9UQ90 795 aa26.37■■□□□ 1.81
SCO1-202ENST00000577335 PCDH11XQ9BZA7 1347 aa26.36■■□□□ 1.81
SCO1-202ENST00000577335 PCDH11YQ9BZA8 1340 aa26.36■■□□□ 1.81
SCO1-202ENST00000577335 KDRP35968 1356 aa26.35■■□□□ 1.81
SCO1-202ENST00000577335 RGPD1P0DJD0 1748 aa26.35■■□□□ 1.81
SCO1-202ENST00000577335 BCL11BQ9C0K0 894 aaPredicted RBP26.35■■□□□ 1.81
SCO1-202ENST00000577335 COL3A1P02461 1466 aaPredicted RBP26.33■■□□□ 1.81
SCO1-202ENST00000577335 SULT6B1Q6IMI4 303 aa26.32■■□□□ 1.8
SCO1-202ENST00000577335 APBA3O96018 575 aa26.31■■□□□ 1.8
SCO1-202ENST00000577335 AMOTQ4VCS5 1084 aa26.3■■□□□ 1.8
SCO1-202ENST00000577335 DEFB132Q7Z7B7 95 aa26.3■■□□□ 1.8
SCO1-202ENST00000577335 NUDCQ9Y266 331 aa26.3■■□□□ 1.8
SCO1-202ENST00000577335 PLEKHO1Q53GL0 409 aaPredicted RBP26.29■■□□□ 1.8
SCO1-202ENST00000577335 CYP27B1O15528 508 aa26.28■■□□□ 1.8
SCO1-202ENST00000577335 AEBP1Q8IUX7 1158 aa26.28■■□□□ 1.8
SCO1-202ENST00000577335 PKD1L3Q7Z443 1732 aa26.27■■□□□ 1.8
SCO1-202ENST00000577335 TNS1Q9HBL0 1735 aaKnown RBP26.27■■□□□ 1.8
SCO1-202ENST00000577335 PLSCR1O15162 318 aa26.26■■□□□ 1.79
SCO1-202ENST00000577335 NKX1-1Q15270 411 aaPredicted RBP26.26■■□□□ 1.79
SCO1-202ENST00000577335 U2SURPO15042 1029 aaKnown RBP26.25■■□□□ 1.79
SCO1-202ENST00000577335 IFNL2Q8IZJ0 200 aa26.25■■□□□ 1.79
SCO1-202ENST00000577335 SHANK3Q9BYB0 1731 aa26.25■■□□□ 1.79
SCO1-202ENST00000577335 MYBBP1AQ9BQG0 1328 aaKnown RBP26.24■■□□□ 1.79
SCO1-202ENST00000577335 EN1Q05925 392 aaPredicted RBP26.24■■□□□ 1.79
SCO1-202ENST00000577335 ACSBG1Q96GR2 724 aa26.24■■□□□ 1.79
SCO1-202ENST00000577335 CAMKK2Q96RR4 588 aa26.24■■□□□ 1.79
SCO1-202ENST00000577335 SBF2Q86WG5 1849 aa26.23■■□□□ 1.79
SCO1-202ENST00000577335 KCNQ2O43526 872 aa26.23■■□□□ 1.79
SCO1-202ENST00000577335 HMOX1P09601 288 aa26.22■■□□□ 1.79
SCO1-202ENST00000577335 PHKG2P15735 406 aa26.22■■□□□ 1.79
SCO1-202ENST00000577335 PRKRIP1Q9H875 184 aaPredicted RBP26.22■■□□□ 1.79
SCO1-202ENST00000577335 NHSQ6T4R5 1651 aa26.22■■□□□ 1.79
SCO1-202ENST00000577335 HSP90AB1P08238 724 aaKnown RBP26.21■■□□□ 1.79
SCO1-202ENST00000577335 PTF1AQ7RTS3 328 aa26.21■■□□□ 1.79
SCO1-202ENST00000577335 PRIM1P49642 420 aaKnown RBP26.2■■□□□ 1.78
SCO1-202ENST00000577335 EZH2Q15910 746 aaKnown RBP26.19■■□□□ 1.78
SCO1-202ENST00000577335 ZNF530Q6P9A1 599 aaPredicted RBP26.19■■□□□ 1.78
SCO1-202ENST00000577335 C1orf141Q5JVX7 400 aa26.17■■□□□ 1.78
SCO1-202ENST00000577335 SYTL4Q96C24 671 aaPredicted RBP26.17■■□□□ 1.78
SCO1-202ENST00000577335 FCHSD2O94868 740 aa26.16■■□□□ 1.78
SCO1-202ENST00000577335 U2AF1L5P0DN76 240 aaPredicted RBP26.16■■□□□ 1.78
SCO1-202ENST00000577335 U2AF1Q01081 240 aaKnown RBP eCLIP26.16■■□□□ 1.78
SCO1-202ENST00000577335 DCAF5Q96JK2 942 aa26.16■■□□□ 1.78
SCO1-202ENST00000577335 RGPD3A6NKT7 1758 aaPredicted RBP26.15■■□□□ 1.78
SCO1-202ENST00000577335 RGPD4Q7Z3J3 1758 aa26.15■■□□□ 1.78
SCO1-202ENST00000577335 RSPH6AQ9H0K4 717 aa26.14■■□□□ 1.78
SCO1-202ENST00000577335 AKAP4Q5JQC9 854 aa26.13■■□□□ 1.77
SCO1-202ENST00000577335 DOT1LQ8TEK3 1739 aa26.12■■□□□ 1.77
SCO1-202ENST00000577335 ERVV-2B6SEH9 535 aa26.12■■□□□ 1.77
SCO1-202ENST00000577335 PRKAR2BP31323 418 aa26.11■■□□□ 1.77
SCO1-202ENST00000577335 GAS2L2Q8NHY3 880 aa26.11■■□□□ 1.77
SCO1-202ENST00000577335 TXNRD1Q16881 649 aa26.1■■□□□ 1.77
SCO1-202ENST00000577335 MTHFSDQ2M296 383 aaKnown RBP26.1■■□□□ 1.77
SCO1-202ENST00000577335 MPRIPQ6WCQ1 1025 aa26.09■■□□□ 1.77
SCO1-202ENST00000577335 PNNQ9H307 717 aaKnown RBP26.09■■□□□ 1.77
SCO1-202ENST00000577335 PROM2Q8N271 834 aa26.08■■□□□ 1.77
SCO1-202ENST00000577335 TMOD3Q9NYL9 352 aa26.08■■□□□ 1.77
SCO1-202ENST00000577335 BTAF1O14981 1849 aa26.08■■□□□ 1.77
SCO1-202ENST00000577335 SLC27A3Q5K4L6 730 aa26.07■■□□□ 1.76
SCO1-202ENST00000577335 NBPF14Q5TI25 921 aa26.07■■□□□ 1.76
SCO1-202ENST00000577335 SMARCC1Q92922 1105 aaPredicted RBP26.07■■□□□ 1.76
SCO1-202ENST00000577335 ANP32CO43423 234 aa26.06■■□□□ 1.76
SCO1-202ENST00000577335 HMGB2P26583 209 aaKnown RBP26.06■■□□□ 1.76
SCO1-202ENST00000577335 PIGBQ92521 554 aa26.06■■□□□ 1.76
SCO1-202ENST00000577335 RREB1Q92766 1687 aa26.06■■□□□ 1.76
SCO1-202ENST00000577335 KDM6AO15550 1401 aaPredicted RBP26.05■■□□□ 1.76
SCO1-202ENST00000577335 NEFMP07197 916 aa26.05■■□□□ 1.76
SCO1-202ENST00000577335 PHACTR3Q96KR7 559 aa26.04■■□□□ 1.76
SCO1-202ENST00000577335 TOGARAM1Q9Y4F4 1720 aa26.04■■□□□ 1.76
SCO1-202ENST00000577335 CABP4P57796 275 aa26.03■■□□□ 1.76
SCO1-202ENST00000577335 KAT6BQ8WYB5 2073 aa26.02■■□□□ 1.76
SCO1-202ENST00000577335 GNAT3A8MTJ3 354 aa26.02■■□□□ 1.76
SCO1-202ENST00000577335 MAP3K5Q99683 1374 aa26.01■■□□□ 1.75
SCO1-202ENST00000577335 PALLDQ8WX93 1383 aa26■■□□□ 1.75
SCO1-202ENST00000577335 RNMTO43148 476 aaKnown RBP26■■□□□ 1.75
SCO1-202ENST00000577335 WDR43Q15061 677 aaKnown RBP eCLIP25.99■■□□□ 1.75
SCO1-202ENST00000577335 PLEKHF1Q96S99 279 aa25.99■■□□□ 1.75
SCO1-202ENST00000577335 NUP188Q5SRE5 1749 aa25.99■■□□□ 1.75
SCO1-202ENST00000577335 SLC52A2Q9HAB3 445 aa25.97■■□□□ 1.75
SCO1-202ENST00000577335 LGR6Q9HBX8 967 aa25.97■■□□□ 1.75
SCO1-202ENST00000577335 LRRC4BQ9NT99 713 aa25.97■■□□□ 1.75
SCO1-202ENST00000577335 CCNL1Q9UK58 526 aaPredicted RBP25.97■■□□□ 1.75
SCO1-202ENST00000577335 ITGB4P16144 1822 aa25.97■■□□□ 1.75
SCO1-202ENST00000577335 HTATSF1O43719 755 aaKnown RBP25.96■■□□□ 1.75
SCO1-202ENST00000577335 NFATC2IPQ8NCF5 419 aa25.96■■□□□ 1.75
SCO1-202ENST00000577335 ATG3Q9NT62 314 aa25.96■■□□□ 1.75
SCO1-202ENST00000577335 MAPK8IP3Q9UPT6 1336 aa25.95■■□□□ 1.75
SCO1-202ENST00000577335 STK32BQ9NY57 414 aa25.95■■□□□ 1.74
SCO1-202ENST00000577335 ASAP1Q9ULH1 1129 aa25.95■■□□□ 1.74
SCO1-202ENST00000577335 MRC1P22897 1456 aa25.95■■□□□ 1.74
SCO1-202ENST00000577335 ADAMTS7Q9UKP4 1686 aa25.94■■□□□ 1.74
SCO1-202ENST00000577335 R3HDM1Q15032 1099 aaKnown RBP25.94■■□□□ 1.74
SCO1-202ENST00000577335 IL17REQ8NFR9 667 aa25.93■■□□□ 1.74
SCO1-202ENST00000577335 RTF1Q92541 710 aaKnown RBP25.93■■□□□ 1.74
SCO1-202ENST00000577335 LY75O60449 1722 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms