RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 RNF123Q5XPI4 1314 aa17.97■□□□□ 0.47
ERCC4-207ENST00000575156 TOM1L2Q6ZVM7 507 aa17.97■□□□□ 0.47
ERCC4-207ENST00000575156 MEGF6O75095 1541 aa17.97■□□□□ 0.47
ERCC4-207ENST00000575156 GNAT3A8MTJ3 354 aa17.96■□□□□ 0.47
ERCC4-207ENST00000575156 ZNF853P0CG23 659 aa17.96■□□□□ 0.47
ERCC4-207ENST00000575156 EVA1CP58658 441 aa17.96■□□□□ 0.47
ERCC4-207ENST00000575156 EXOSC9Q06265 439 aaKnown RBP17.95■□□□□ 0.46
ERCC4-207ENST00000575156 PLEKHO1Q53GL0 409 aaPredicted RBP17.95■□□□□ 0.46
ERCC4-207ENST00000575156 RAPGEF4Q8WZA2 1011 aa17.95■□□□□ 0.46
ERCC4-207ENST00000575156 RTF1Q92541 710 aaKnown RBP17.95■□□□□ 0.46
ERCC4-207ENST00000575156 MAP3K5Q99683 1374 aa17.95■□□□□ 0.46
ERCC4-207ENST00000575156 ZNF530Q6P9A1 599 aaPredicted RBP17.95■□□□□ 0.46
ERCC4-207ENST00000575156 IL17REQ8NFR9 667 aa17.95■□□□□ 0.46
ERCC4-207ENST00000575156 IFT57Q9NWB7 429 aa17.95■□□□□ 0.46
ERCC4-207ENST00000575156 CRB1P82279 1406 aa17.94■□□□□ 0.46
ERCC4-207ENST00000575156 NEFLP07196 543 aa17.94■□□□□ 0.46
ERCC4-207ENST00000575156 CALD1Q05682 793 aaKnown RBP17.94■□□□□ 0.46
ERCC4-207ENST00000575156 MBIPQ9NS73 344 aa17.94■□□□□ 0.46
ERCC4-207ENST00000575156 CFAP44Q96MT7 982 aa17.94■□□□□ 0.46
ERCC4-207ENST00000575156 PLIN1O60240 522 aa17.93■□□□□ 0.46
ERCC4-207ENST00000575156 RRP1P56182 461 aaKnown RBP17.93■□□□□ 0.46
ERCC4-207ENST00000575156 GNAI1P63096 354 aa17.93■□□□□ 0.46
ERCC4-207ENST00000575156 AMOTQ4VCS5 1084 aa17.93■□□□□ 0.46
ERCC4-207ENST00000575156 TATP17735 454 aaPredicted RBP17.92■□□□□ 0.46
ERCC4-207ENST00000575156 HSPA1LP34931 641 aa17.92■□□□□ 0.46
ERCC4-207ENST00000575156 CARD10Q9BWT7 1032 aa17.92■□□□□ 0.46
ERCC4-207ENST00000575156 MIS18AQ9NYP9 233 aa17.92■□□□□ 0.46
ERCC4-207ENST00000575156 COL14A1Q05707 1796 aaKnown RBP17.92■□□□□ 0.46
ERCC4-207ENST00000575156 HTATSF1O43719 755 aaKnown RBP17.92■□□□□ 0.46
ERCC4-207ENST00000575156 BCAR3O75815 825 aa17.92■□□□□ 0.46
ERCC4-207ENST00000575156 LGR6Q9HBX8 967 aa17.92■□□□□ 0.46
ERCC4-207ENST00000575156 USP35Q9P2H5 1018 aa17.92■□□□□ 0.46
ERCC4-207ENST00000575156 JCADQ9P266 1359 aa17.91■□□□□ 0.46
ERCC4-207ENST00000575156 AKAP4Q5JQC9 854 aa17.91■□□□□ 0.46
ERCC4-207ENST00000575156 MPRIPQ6WCQ1 1025 aa17.91■□□□□ 0.46
ERCC4-207ENST00000575156 CHL1O00533 1208 aa17.9■□□□□ 0.46
ERCC4-207ENST00000575156 RARSP54136 660 aaKnown RBP17.89■□□□□ 0.45
ERCC4-207ENST00000575156 C1orf141Q5JVX7 400 aa17.89■□□□□ 0.45
ERCC4-207ENST00000575156 TSPYL6Q8N831 410 aa17.89■□□□□ 0.45
ERCC4-207ENST00000575156 BCL2L13Q9BXK5 485 aa17.89■□□□□ 0.45
ERCC4-207ENST00000575156 KRT24Q2M2I5 525 aa17.88■□□□□ 0.45
ERCC4-207ENST00000575156 ELL2O00472 640 aaPredicted RBP17.87■□□□□ 0.45
ERCC4-207ENST00000575156 C8orf58Q8NAV2 365 aa17.87■□□□□ 0.45
ERCC4-207ENST00000575156 CEMIPQ8WUJ3 1361 aa17.87■□□□□ 0.45
ERCC4-207ENST00000575156 OVOS2A0A0G2JMS6 1433 aa17.87■□□□□ 0.45
ERCC4-207ENST00000575156 LRRC37A3O60309 1634 aa17.87■□□□□ 0.45
ERCC4-207ENST00000575156 CYP27B1O15528 508 aa17.87■□□□□ 0.45
ERCC4-207ENST00000575156 SPG7Q9UQ90 795 aa17.87■□□□□ 0.45
ERCC4-207ENST00000575156 PLCH1Q4KWH8 1693 aa17.86■□□□□ 0.45
ERCC4-207ENST00000575156 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.86■□□□□ 0.45
ERCC4-207ENST00000575156 RNMTO43148 476 aaKnown RBP17.86■□□□□ 0.45
ERCC4-207ENST00000575156 IL2RBP14784 551 aa17.86■□□□□ 0.45
ERCC4-207ENST00000575156 PHKG2P15735 406 aa17.86■□□□□ 0.45
ERCC4-207ENST00000575156 TSPYL4Q9UJ04 414 aa17.86■□□□□ 0.45
ERCC4-207ENST00000575156 C20orf194Q5TEA3 1177 aa17.85■□□□□ 0.45
ERCC4-207ENST00000575156 LRP6O75581 1613 aa17.85■□□□□ 0.45
ERCC4-207ENST00000575156 VAMP4O75379 141 aa17.84■□□□□ 0.45
ERCC4-207ENST00000575156 TAF7Q15545 349 aaPredicted RBP17.84■□□□□ 0.45
ERCC4-207ENST00000575156 C8orf37Q96NL8 207 aa17.84■□□□□ 0.45
ERCC4-207ENST00000575156 CT47B1P0C2W7 299 aaPredicted RBP17.83■□□□□ 0.45
ERCC4-207ENST00000575156 ZCRB1Q8TBF4 217 aaKnown RBP17.83■□□□□ 0.45
ERCC4-207ENST00000575156 SSH1Q8WYL5 1049 aa17.83■□□□□ 0.45
ERCC4-207ENST00000575156 SLIT2O94813 1529 aa17.83■□□□□ 0.45
ERCC4-207ENST00000575156 PKD1L3Q7Z443 1732 aa17.83■□□□□ 0.44
ERCC4-207ENST00000575156 IFNL2Q8IZJ0 200 aa17.83■□□□□ 0.44
ERCC4-207ENST00000575156 KDM6AO15550 1401 aaPredicted RBP17.82■□□□□ 0.44
ERCC4-207ENST00000575156 TWISTNBQ3B726 338 aaPredicted RBP17.82■□□□□ 0.44
ERCC4-207ENST00000575156 NRAPQ86VF7 1730 aa17.82■□□□□ 0.44
ERCC4-207ENST00000575156 SPATA31A6Q5VVP1 1343 aa17.82■□□□□ 0.44
ERCC4-207ENST00000575156 TCERG1O14776 1098 aaKnown RBP17.81■□□□□ 0.44
ERCC4-207ENST00000575156 PLEKHG2Q9H7P9 1386 aa17.81■□□□□ 0.44
ERCC4-207ENST00000575156 PARP4Q9UKK3 1724 aaKnown RBP17.81■□□□□ 0.44
ERCC4-207ENST00000575156 TEFQ10587 303 aa17.81■□□□□ 0.44
ERCC4-207ENST00000575156 NGLY1Q96IV0 654 aa17.81■□□□□ 0.44
ERCC4-207ENST00000575156 KCNQ3O43525 872 aa17.8■□□□□ 0.44
ERCC4-207ENST00000575156 DDX54Q8TDD1 881 aaKnown RBP17.8■□□□□ 0.44
ERCC4-207ENST00000575156 FRAT1Q92837 279 aaPredicted RBP17.8■□□□□ 0.44
ERCC4-207ENST00000575156 SMC4Q9NTJ3 1288 aa17.8■□□□□ 0.44
ERCC4-207ENST00000575156 DISP2A7MBM2 1401 aa17.8■□□□□ 0.44
ERCC4-207ENST00000575156 TNNQ9UQP3 1299 aa17.79■□□□□ 0.44
ERCC4-207ENST00000575156 SPATA31A1Q5TZJ5 1347 aa17.79■□□□□ 0.44
ERCC4-207ENST00000575156 PCDH11XQ9BZA7 1347 aa17.79■□□□□ 0.44
ERCC4-207ENST00000575156 PCDH11YQ9BZA8 1340 aa17.79■□□□□ 0.44
ERCC4-207ENST00000575156 ADAMTS7Q9UKP4 1686 aa17.78■□□□□ 0.44
ERCC4-207ENST00000575156 EXOC6Q8TAG9 804 aa17.78■□□□□ 0.44
ERCC4-207ENST00000575156 BCL9LQ86UU0 1499 aa17.78■□□□□ 0.44
ERCC4-207ENST00000575156 UNC5CLQ8IV45 518 aa17.78■□□□□ 0.44
ERCC4-207ENST00000575156 BTBD11A6QL63 1104 aa17.77■□□□□ 0.44
ERCC4-207ENST00000575156 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.77■□□□□ 0.44
ERCC4-207ENST00000575156 DCAF5Q96JK2 942 aa17.77■□□□□ 0.44
ERCC4-207ENST00000575156 CRBNQ96SW2 442 aa17.77■□□□□ 0.44
ERCC4-207ENST00000575156 CCDC9Q9Y3X0 531 aaKnown RBP17.77■□□□□ 0.44
ERCC4-207ENST00000575156 VIRMAQ69YN4 1812 aaKnown RBP17.77■□□□□ 0.43
ERCC4-207ENST00000575156 SPATA31A5Q5VU36 1347 aa17.77■□□□□ 0.43
ERCC4-207ENST00000575156 SPATA31A7Q8IWB4 1347 aa17.77■□□□□ 0.43
ERCC4-207ENST00000575156 SHANK3Q9BYB0 1731 aa17.77■□□□□ 0.43
ERCC4-207ENST00000575156 NWD2Q9ULI1 1742 aa17.77■□□□□ 0.43
ERCC4-207ENST00000575156 BABAM1Q9NWV8 329 aa17.76■□□□□ 0.43
ERCC4-207ENST00000575156 FNBP4Q8N3X1 1017 aaPredicted RBP17.76■□□□□ 0.43
ERCC4-207ENST00000575156 NFATC2IPQ8NCF5 419 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms