RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 NEUROD2Q15784 382 aa15.63■□□□□ 0.09
PRPF8-212ENST00000575116 VPS72Q15906 364 aa15.63■□□□□ 0.09
PRPF8-212ENST00000575116 WDR63Q8IWG1 891 aa15.63■□□□□ 0.09
PRPF8-212ENST00000575116 WWC1Q8IX03 1113 aa15.63■□□□□ 0.09
PRPF8-212ENST00000575116 RRP7AQ9Y3A4 280 aaKnown RBP15.63■□□□□ 0.09
PRPF8-212ENST00000575116 SALL2Q9Y467 1007 aaPredicted RBP15.63■□□□□ 0.09
PRPF8-212ENST00000575116 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.63■□□□□ 0.09
PRPF8-212ENST00000575116 CDCA7Q9BWT1 371 aaPredicted RBP15.62■□□□□ 0.09
PRPF8-212ENST00000575116 USP21Q9UK80 565 aa15.62■□□□□ 0.09
PRPF8-212ENST00000575116 TRIM35Q9UPQ4 493 aa15.62■□□□□ 0.09
PRPF8-212ENST00000575116 SPG7Q9UQ90 795 aa15.62■□□□□ 0.09
PRPF8-212ENST00000575116 SPATA31A1Q5TZJ5 1347 aa15.62■□□□□ 0.09
PRPF8-212ENST00000575116 SPATA31A5Q5VU36 1347 aa15.62■□□□□ 0.09
PRPF8-212ENST00000575116 SPATA31A7Q8IWB4 1347 aa15.62■□□□□ 0.09
PRPF8-212ENST00000575116 OVOS2A0A0G2JMS6 1433 aa15.6■□□□□ 0.09
PRPF8-212ENST00000575116 PARP4Q9UKK3 1724 aaKnown RBP15.6■□□□□ 0.09
PRPF8-212ENST00000575116 SENP3-EIF4A1A0A087X0R7 540 aa15.6■□□□□ 0.09
PRPF8-212ENST00000575116 CALD1Q05682 793 aaKnown RBP15.6■□□□□ 0.09
PRPF8-212ENST00000575116 GOLGA2Q08379 1002 aa15.6■□□□□ 0.09
PRPF8-212ENST00000575116 AKAP4Q5JQC9 854 aa15.6■□□□□ 0.09
PRPF8-212ENST00000575116 BARGINQ6ZT62 677 aa15.6■□□□□ 0.09
PRPF8-212ENST00000575116 MEGF6O75095 1541 aa15.59■□□□□ 0.09
PRPF8-212ENST00000575116 DLG5Q8TDM6 1919 aa15.59■□□□□ 0.09
PRPF8-212ENST00000575116 GNAT3A8MTJ3 354 aa15.59■□□□□ 0.09
PRPF8-212ENST00000575116 CENPBP07199 599 aaPredicted RBP15.59■□□□□ 0.09
PRPF8-212ENST00000575116 AFF2P51816 1311 aa15.59■□□□□ 0.09
PRPF8-212ENST00000575116 IL16Q14005 1332 aa15.59■□□□□ 0.09
PRPF8-212ENST00000575116 PKD1L3Q7Z443 1732 aa15.58■□□□□ 0.08
PRPF8-212ENST00000575116 C1orf141Q5JVX7 400 aa15.58■□□□□ 0.08
PRPF8-212ENST00000575116 ZNF530Q6P9A1 599 aaPredicted RBP15.58■□□□□ 0.08
PRPF8-212ENST00000575116 ZCRB1Q8TBF4 217 aaKnown RBP15.58■□□□□ 0.08
PRPF8-212ENST00000575116 RTF1Q92541 710 aaKnown RBP15.58■□□□□ 0.08
PRPF8-212ENST00000575116 USP35Q9P2H5 1018 aa15.58■□□□□ 0.08
PRPF8-212ENST00000575116 MAP3K5Q99683 1374 aa15.58■□□□□ 0.08
PRPF8-212ENST00000575116 DISP2A7MBM2 1401 aa15.58■□□□□ 0.08
PRPF8-212ENST00000575116 TRPC5Q9UL62 973 aaPredicted RBP15.57■□□□□ 0.08
PRPF8-212ENST00000575116 CCDC9Q9Y3X0 531 aaKnown RBP15.57■□□□□ 0.08
PRPF8-212ENST00000575116 E9PSI1 815 aa15.56■□□□□ 0.08
PRPF8-212ENST00000575116 HSP90AB1P08238 724 aaKnown RBP15.56■□□□□ 0.08
PRPF8-212ENST00000575116 IFNL2Q8IZJ0 200 aa15.56■□□□□ 0.08
PRPF8-212ENST00000575116 ATRNO75882 1429 aa15.55■□□□□ 0.08
PRPF8-212ENST00000575116 PCDH11XQ9BZA7 1347 aa15.55■□□□□ 0.08
PRPF8-212ENST00000575116 PCDH11YQ9BZA8 1340 aa15.55■□□□□ 0.08
PRPF8-212ENST00000575116 SLFN5Q08AF3 891 aa15.55■□□□□ 0.08
PRPF8-212ENST00000575116 TRMT2AQ8IZ69 625 aaKnown RBP15.55■□□□□ 0.08
PRPF8-212ENST00000575116 WNK3Q9BYP7 1800 aa15.54■□□□□ 0.08
PRPF8-212ENST00000575116 EXOC5O00471 708 aa15.54■□□□□ 0.08
PRPF8-212ENST00000575116 PHKG2P15735 406 aa15.54■□□□□ 0.08
PRPF8-212ENST00000575116 ZNF772Q68DY9 489 aaPredicted RBP15.54■□□□□ 0.08
PRPF8-212ENST00000575116 GJD4Q96KN9 370 aaPredicted RBP15.54■□□□□ 0.08
PRPF8-212ENST00000575116 CYP27B1O15528 508 aa15.53■□□□□ 0.08
PRPF8-212ENST00000575116 NKX1-1Q15270 411 aaPredicted RBP15.53■□□□□ 0.08
PRPF8-212ENST00000575116 IL17REQ8NFR9 667 aa15.53■□□□□ 0.08
PRPF8-212ENST00000575116 QTRT2Q9H974 415 aaKnown RBP15.53■□□□□ 0.08
PRPF8-212ENST00000575116 CEMIPQ8WUJ3 1361 aa15.52■□□□□ 0.08
PRPF8-212ENST00000575116 RNMTO43148 476 aaKnown RBP15.52■□□□□ 0.08
PRPF8-212ENST00000575116 ONECUT3O60422 494 aaPredicted RBP15.52■□□□□ 0.08
PRPF8-212ENST00000575116 GNAI1P63096 354 aa15.52■□□□□ 0.08
PRPF8-212ENST00000575116 MCM10Q7L590 875 aa15.52■□□□□ 0.08
PRPF8-212ENST00000575116 CDCA7LQ96GN5 454 aa15.52■□□□□ 0.08
PRPF8-212ENST00000575116 DCAF5Q96JK2 942 aa15.52■□□□□ 0.08
PRPF8-212ENST00000575116 MYH16Q9H6N6 1097 aa15.52■□□□□ 0.08
PRPF8-212ENST00000575116 IFT57Q9NWB7 429 aa15.52■□□□□ 0.08
PRPF8-212ENST00000575116 ZNF853P0CG23 659 aa15.51■□□□□ 0.07
PRPF8-212ENST00000575116 DCTN1Q14203 1278 aa15.51■□□□□ 0.07
PRPF8-212ENST00000575116 DUSP27Q5VZP5 1158 aa15.51■□□□□ 0.07
PRPF8-212ENST00000575116 CFAP44Q96MT7 982 aa15.51■□□□□ 0.07
PRPF8-212ENST00000575116 BABAM1Q9NWV8 329 aa15.51■□□□□ 0.07
PRPF8-212ENST00000575116 ADAMTS7Q9UKP4 1686 aa15.51■□□□□ 0.07
PRPF8-212ENST00000575116 DDB1Q16531 1140 aa15.5■□□□□ 0.07
PRPF8-212ENST00000575116 LGR6Q9HBX8 967 aa15.5■□□□□ 0.07
PRPF8-212ENST00000575116 SPINK5Q9NQ38 1064 aaPredicted RBP15.5■□□□□ 0.07
PRPF8-212ENST00000575116 TNS2Q63HR2 1409 aa15.5■□□□□ 0.07
PRPF8-212ENST00000575116 SHANK3Q9BYB0 1731 aa15.49■□□□□ 0.07
PRPF8-212ENST00000575116 TAF7Q15545 349 aaPredicted RBP15.49■□□□□ 0.07
PRPF8-212ENST00000575116 FAM98CQ17RN3 349 aaKnown RBP15.49■□□□□ 0.07
PRPF8-212ENST00000575116 MPRIPQ6WCQ1 1025 aa15.49■□□□□ 0.07
PRPF8-212ENST00000575116 THUMPD2Q9BTF0 503 aaKnown RBP15.49■□□□□ 0.07
PRPF8-212ENST00000575116 GLI3P10071 1580 aa15.49■□□□□ 0.07
PRPF8-212ENST00000575116 LRRC37A3O60309 1634 aa15.48■□□□□ 0.07
PRPF8-212ENST00000575116 CHL1O00533 1208 aa15.48■□□□□ 0.07
PRPF8-212ENST00000575116 DDX54Q8TDD1 881 aaKnown RBP15.48■□□□□ 0.07
PRPF8-212ENST00000575116 SCN11AQ9UI33 1791 aa15.47■□□□□ 0.07
PRPF8-212ENST00000575116 ERVV-2B6SEH9 535 aa15.47■□□□□ 0.07
PRPF8-212ENST00000575116 TEFQ10587 303 aa15.47■□□□□ 0.07
PRPF8-212ENST00000575116 KDM6AO15550 1401 aaPredicted RBP15.46■□□□□ 0.07
PRPF8-212ENST00000575116 VIRMAQ69YN4 1812 aaKnown RBP15.46■□□□□ 0.07
PRPF8-212ENST00000575116 LAS1LQ9Y4W2 734 aaKnown RBP15.46■□□□□ 0.07
PRPF8-212ENST00000575116 THSD7AQ9UPZ6 1657 aa15.46■□□□□ 0.07
PRPF8-212ENST00000575116 RBM6P78332 1123 aaKnown RBP15.45■□□□□ 0.06
PRPF8-212ENST00000575116 ILDR1Q86SU0 546 aaPredicted RBP15.45■□□□□ 0.06
PRPF8-212ENST00000575116 SLC52A2Q9HAB3 445 aa15.45■□□□□ 0.06
PRPF8-212ENST00000575116 FANCIQ9NVI1 1328 aa15.44■□□□□ 0.06
PRPF8-212ENST00000575116 CT47B1P0C2W7 299 aaPredicted RBP15.44■□□□□ 0.06
PRPF8-212ENST00000575116 MBIPQ9NS73 344 aa15.44■□□□□ 0.06
PRPF8-212ENST00000575116 MRC1P22897 1456 aa15.44■□□□□ 0.06
PRPF8-212ENST00000575116 CABP4P57796 275 aa15.43■□□□□ 0.06
PRPF8-212ENST00000575116 TSR2Q969E8 191 aaKnown RBP15.43■□□□□ 0.06
PRPF8-212ENST00000575116 TSPYL4Q9UJ04 414 aa15.43■□□□□ 0.06
PRPF8-212ENST00000575116 SIPA1L3O60292 1781 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms