RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 HSP90AB2PQ58FF8 381 aa14.57□□□□□ -0.08
LITAF-216ENST00000574848 PROM2Q8N271 834 aa14.57□□□□□ -0.08
LITAF-216ENST00000574848 EMILIN1Q9Y6C2 1016 aa14.57□□□□□ -0.08
LITAF-216ENST00000574848 KCNQ2O43526 872 aa14.56□□□□□ -0.08
LITAF-216ENST00000574848 WASHC2AQ641Q2 1341 aa14.56□□□□□ -0.08
LITAF-216ENST00000574848 PLEKHG2Q9H7P9 1386 aa14.56□□□□□ -0.08
LITAF-216ENST00000574848 LY75O60449 1722 aa14.55□□□□□ -0.08
LITAF-216ENST00000574848 ANO8Q9HCE9 1232 aaPredicted RBP14.55□□□□□ -0.08
LITAF-216ENST00000574848 TXNRD1Q16881 649 aa14.54□□□□□ -0.08
LITAF-216ENST00000574848 PANK3Q9H999 370 aa14.54□□□□□ -0.08
LITAF-216ENST00000574848 QSER1Q2KHR3 1735 aa14.54□□□□□ -0.08
LITAF-216ENST00000574848 TOGARAM1Q9Y4F4 1720 aa14.53□□□□□ -0.08
LITAF-216ENST00000574848 ZCRB1Q8TBF4 217 aaKnown RBP14.53□□□□□ -0.08
LITAF-216ENST00000574848 ACSBG1Q96GR2 724 aa14.53□□□□□ -0.08
LITAF-216ENST00000574848 POLR3GLQ9BT43 218 aa14.53□□□□□ -0.08
LITAF-216ENST00000574848 POLKQ9UBT6 870 aa14.53□□□□□ -0.08
LITAF-216ENST00000574848 KIF7Q2M1P5 1343 aa14.52□□□□□ -0.08
LITAF-216ENST00000574848 USHBP1Q8N6Y0 703 aa14.52□□□□□ -0.09
LITAF-216ENST00000574848 RAPGEF4Q8WZA2 1011 aa14.52□□□□□ -0.09
LITAF-216ENST00000574848 PCDH11XQ9BZA7 1347 aa14.51□□□□□ -0.09
LITAF-216ENST00000574848 PCDH11YQ9BZA8 1340 aa14.51□□□□□ -0.09
LITAF-216ENST00000574848 DDX54Q8TDD1 881 aaKnown RBP14.51□□□□□ -0.09
LITAF-216ENST00000574848 TATP17735 454 aaPredicted RBP14.5□□□□□ -0.09
LITAF-216ENST00000574848 SLC15A2Q16348 729 aa14.48□□□□□ -0.09
LITAF-216ENST00000574848 ITGB4P16144 1822 aa14.48□□□□□ -0.09
LITAF-216ENST00000574848 TUBGCP6Q96RT7 1819 aa14.48□□□□□ -0.09
LITAF-216ENST00000574848 IGSF1Q8N6C5 1336 aa14.47□□□□□ -0.09
LITAF-216ENST00000574848 PPM1GO15355 546 aaPredicted RBP14.47□□□□□ -0.09
LITAF-216ENST00000574848 EIF4A2Q14240 407 aaKnown RBP14.47□□□□□ -0.09
LITAF-216ENST00000574848 AMER1Q5JTC6 1135 aaPredicted RBP14.47□□□□□ -0.09
LITAF-216ENST00000574848 SLC27A3Q5K4L6 730 aa14.47□□□□□ -0.09
LITAF-216ENST00000574848 EYA1Q99502 592 aa14.47□□□□□ -0.09
LITAF-216ENST00000574848 STK32BQ9NY57 414 aa14.47□□□□□ -0.09
LITAF-216ENST00000574848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.47□□□□□ -0.09
LITAF-216ENST00000574848 COL24A1Q17RW2 1714 aa14.46□□□□□ -0.09
LITAF-216ENST00000574848 KAT6BQ8WYB5 2073 aa14.46□□□□□ -0.09
LITAF-216ENST00000574848 CYP27B1O15528 508 aa14.46□□□□□ -0.09
LITAF-216ENST00000574848 PRIM1P49642 420 aaKnown RBP14.46□□□□□ -0.09
LITAF-216ENST00000574848 SPON1Q9HCB6 807 aa14.46□□□□□ -0.09
LITAF-216ENST00000574848 LRRC4BQ9NT99 713 aa14.46□□□□□ -0.09
LITAF-216ENST00000574848 KNSTRNQ9Y448 316 aa14.46□□□□□ -0.09
LITAF-216ENST00000574848 NKX1-1Q15270 411 aaPredicted RBP14.45□□□□□ -0.1
LITAF-216ENST00000574848 C5P01031 1676 aa14.45□□□□□ -0.1
LITAF-216ENST00000574848 NPC1L1Q9UHC9 1359 aa14.45□□□□□ -0.1
LITAF-216ENST00000574848 PER1O15534 1290 aaPredicted RBP14.44□□□□□ -0.1
LITAF-216ENST00000574848 TNNT2P45379 298 aaPredicted RBP14.44□□□□□ -0.1
LITAF-216ENST00000574848 TAF1LQ8IZX4 1826 aa14.43□□□□□ -0.1
LITAF-216ENST00000574848 ZNF827Q17R98 1081 aa14.43□□□□□ -0.1
LITAF-216ENST00000574848 MORC1Q86VD1 984 aa14.43□□□□□ -0.1
LITAF-216ENST00000574848 AKT1S1Q96B36 256 aa14.43□□□□□ -0.1
LITAF-216ENST00000574848 SYTL4Q96C24 671 aaPredicted RBP14.43□□□□□ -0.1
LITAF-216ENST00000574848 PDGFDQ9GZP0 370 aaPredicted RBP14.43□□□□□ -0.1
LITAF-216ENST00000574848 SPG7Q9UQ90 795 aa14.43□□□□□ -0.1
LITAF-216ENST00000574848 KDRP35968 1356 aa14.42□□□□□ -0.1
LITAF-216ENST00000574848 PTGER2P43116 358 aa14.41□□□□□ -0.1
LITAF-216ENST00000574848 ZNF831Q5JPB2 1677 aa14.4□□□□□ -0.1
LITAF-216ENST00000574848 PALLDQ8WX93 1383 aa14.4□□□□□ -0.1
LITAF-216ENST00000574848 SGIP1Q9BQI5 828 aa14.4□□□□□ -0.1
LITAF-216ENST00000574848 MTFR1LQ9H019 292 aa14.4□□□□□ -0.1
LITAF-216ENST00000574848 PHKG2P15735 406 aa14.39□□□□□ -0.11
LITAF-216ENST00000574848 C4BP0C0L5 1744 aa14.38□□□□□ -0.11
LITAF-216ENST00000574848 ZBTB7AO95365 584 aa14.38□□□□□ -0.11
LITAF-216ENST00000574848 IFNL2Q8IZJ0 200 aa14.38□□□□□ -0.11
LITAF-216ENST00000574848 CCNL1Q9UK58 526 aaPredicted RBP14.38□□□□□ -0.11
LITAF-216ENST00000574848 PNPLA7Q6ZV29 1317 aa14.38□□□□□ -0.11
LITAF-216ENST00000574848 COL3A1P02461 1466 aaPredicted RBP14.38□□□□□ -0.11
LITAF-216ENST00000574848 IL13P35225 146 aa14.37□□□□□ -0.11
LITAF-216ENST00000574848 MAP3K5Q99683 1374 aa14.36□□□□□ -0.11
LITAF-216ENST00000574848 KDM6AO15550 1401 aaPredicted RBP14.36□□□□□ -0.11
LITAF-216ENST00000574848 HMGB2P26583 209 aaKnown RBP14.36□□□□□ -0.11
LITAF-216ENST00000574848 SLC16A10Q8TF71 515 aa14.36□□□□□ -0.11
LITAF-216ENST00000574848 SMARCC1Q92922 1105 aaPredicted RBP14.36□□□□□ -0.11
LITAF-216ENST00000574848 PPP1R1BQ9UD71 204 aaPredicted RBP14.36□□□□□ -0.11
LITAF-216ENST00000574848 CICQ96RK0 1608 aaPredicted RBP14.36□□□□□ -0.11
LITAF-216ENST00000574848 UBR3Q6ZT12 1888 aa14.35□□□□□ -0.11
LITAF-216ENST00000574848 KCNQ4P56696 695 aa14.35□□□□□ -0.11
LITAF-216ENST00000574848 AMOTQ4VCS5 1084 aa14.35□□□□□ -0.11
LITAF-216ENST00000574848 MPRIPQ6WCQ1 1025 aa14.35□□□□□ -0.11
LITAF-216ENST00000574848 PIGBQ92521 554 aa14.35□□□□□ -0.11
LITAF-216ENST00000574848 ADAMTS7Q9UKP4 1686 aa14.35□□□□□ -0.11
LITAF-216ENST00000574848 SCN11AQ9UI33 1791 aa14.34□□□□□ -0.11
LITAF-216ENST00000574848 AEBP1Q8IUX7 1158 aa14.34□□□□□ -0.11
LITAF-216ENST00000574848 MRC1P22897 1456 aa14.33□□□□□ -0.12
LITAF-216ENST00000574848 COL5A3P25940 1745 aaPredicted RBP14.33□□□□□ -0.12
LITAF-216ENST00000574848 HSP90AB1P08238 724 aaKnown RBP14.33□□□□□ -0.12
LITAF-216ENST00000574848 MTHFSP49914 203 aa14.33□□□□□ -0.12
LITAF-216ENST00000574848 PLEKHO1Q53GL0 409 aaPredicted RBP14.33□□□□□ -0.12
LITAF-216ENST00000574848 DCAF5Q96JK2 942 aa14.33□□□□□ -0.12
LITAF-216ENST00000574848 TMOD3Q9NYL9 352 aa14.33□□□□□ -0.12
LITAF-216ENST00000574848 TFCP2L1Q9NZI6 479 aa14.33□□□□□ -0.12
LITAF-216ENST00000574848 ATF5Q9Y2D1 282 aaPredicted RBP14.33□□□□□ -0.12
LITAF-216ENST00000574848 ERVV-2B6SEH9 535 aa14.32□□□□□ -0.12
LITAF-216ENST00000574848 CC2D1BQ5T0F9 858 aaKnown RBP14.32□□□□□ -0.12
LITAF-216ENST00000574848 SULT6B1Q6IMI4 303 aa14.31□□□□□ -0.12
LITAF-216ENST00000574848 ZNF530Q6P9A1 599 aaPredicted RBP14.31□□□□□ -0.12
LITAF-216ENST00000574848 VIRMAQ69YN4 1812 aaKnown RBP14.31□□□□□ -0.12
LITAF-216ENST00000574848 LOC102724428A0A0B4J2F2 783 aa14.3□□□□□ -0.12
LITAF-216ENST00000574848 SIK1P57059 783 aa14.3□□□□□ -0.12
LITAF-216ENST00000574848 ARXQ96QS3 562 aa14.29□□□□□ -0.12
LITAF-216ENST00000574848 ATG3Q9NT62 314 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms