RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 KIAA0232Q92628 1395 aa17.79■□□□□ 0.44
VPS33B-208ENST00000574755 ABCC4O15439 1325 aa17.79■□□□□ 0.44
VPS33B-208ENST00000574755 PROSER2Q86WR7 435 aaPredicted RBP17.79■□□□□ 0.44
VPS33B-208ENST00000574755 CHMP4BQ9H444 224 aaKnown RBP17.79■□□□□ 0.44
VPS33B-208ENST00000574755 NFAT5O94916 1531 aa17.79■□□□□ 0.44
VPS33B-208ENST00000574755 API5Q9BZZ5 524 aaKnown RBP17.79■□□□□ 0.44
VPS33B-208ENST00000574755 ZBTB7BO15156 539 aaPredicted RBP17.77■□□□□ 0.44
VPS33B-208ENST00000574755 MYT1Q01538 1121 aa17.77■□□□□ 0.44
VPS33B-208ENST00000574755 KCNH5Q8NCM2 988 aa17.77■□□□□ 0.44
VPS33B-208ENST00000574755 MIS18AQ9NYP9 233 aa17.77■□□□□ 0.44
VPS33B-208ENST00000574755 TSPYL4Q9UJ04 414 aa17.77■□□□□ 0.44
VPS33B-208ENST00000574755 XPCQ01831 940 aaPredicted RBP17.76■□□□□ 0.43
VPS33B-208ENST00000574755 IP6K1Q92551 441 aa17.76■□□□□ 0.43
VPS33B-208ENST00000574755 DDRGK1Q96HY6 314 aa17.76■□□□□ 0.43
VPS33B-208ENST00000574755 ZBTB7CA1YPR0 619 aa17.76■□□□□ 0.43
VPS33B-208ENST00000574755 GNAT3A8MTJ3 354 aa17.75■□□□□ 0.43
VPS33B-208ENST00000574755 SMC5Q8IY18 1101 aa17.75■□□□□ 0.43
VPS33B-208ENST00000574755 HTATSF1O43719 755 aaKnown RBP17.75■□□□□ 0.43
VPS33B-208ENST00000574755 USHBP1Q8N6Y0 703 aa17.75■□□□□ 0.43
VPS33B-208ENST00000574755 LRRC37A3O60309 1634 aa17.74■□□□□ 0.43
VPS33B-208ENST00000574755 LMOD2Q6P5Q4 547 aa17.73■□□□□ 0.43
VPS33B-208ENST00000574755 PHRF1Q9P1Y6 1649 aaKnown RBP17.73■□□□□ 0.43
VPS33B-208ENST00000574755 MAP3K5Q99683 1374 aa17.73■□□□□ 0.43
VPS33B-208ENST00000574755 PLEKHG5O94827 1062 aa17.73■□□□□ 0.43
VPS33B-208ENST00000574755 C19orf44Q9H6X5 657 aa17.73■□□□□ 0.43
VPS33B-208ENST00000574755 C1orf115Q9H7X2 142 aa17.73■□□□□ 0.43
VPS33B-208ENST00000574755 KIF1AQ12756 1690 aa17.72■□□□□ 0.43
VPS33B-208ENST00000574755 C1orf167Q5SNV9 1468 aa17.71■□□□□ 0.43
VPS33B-208ENST00000574755 GCP02774 474 aa17.71■□□□□ 0.43
VPS33B-208ENST00000574755 NBPF6Q5VWK0 638 aa17.71■□□□□ 0.42
VPS33B-208ENST00000574755 NBPF4Q96M43 638 aa17.71■□□□□ 0.42
VPS33B-208ENST00000574755 TRPM3Q9HCF6 1732 aaPredicted RBP17.71■□□□□ 0.42
VPS33B-208ENST00000574755 PTPRCP08575 1304 aa17.7■□□□□ 0.42
VPS33B-208ENST00000574755 MSH6P52701 1360 aa17.7■□□□□ 0.42
VPS33B-208ENST00000574755 RGPD2P0DJD1 1756 aa17.7■□□□□ 0.42
VPS33B-208ENST00000574755 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
VPS33B-208ENST00000574755 KRT28Q7Z3Y7 464 aa17.69■□□□□ 0.42
VPS33B-208ENST00000574755 SLIT3O75094 1523 aa17.69■□□□□ 0.42
VPS33B-208ENST00000574755 RGS12O14924 1447 aa17.69■□□□□ 0.42
VPS33B-208ENST00000574755 SEC24BO95487 1268 aa17.69■□□□□ 0.42
VPS33B-208ENST00000574755 INTS3Q68E01 1043 aaKnown RBP17.69■□□□□ 0.42
VPS33B-208ENST00000574755 NUCB1Q02818 461 aa17.68■□□□□ 0.42
VPS33B-208ENST00000574755 IL17REQ8NFR9 667 aa17.68■□□□□ 0.42
VPS33B-208ENST00000574755 ATF3P18847 181 aa17.67■□□□□ 0.42
VPS33B-208ENST00000574755 GCC1Q96CN9 775 aa17.67■□□□□ 0.42
VPS33B-208ENST00000574755 ARHGEF25Q86VW2 580 aa17.67■□□□□ 0.42
VPS33B-208ENST00000574755 LNPKQ9C0E8 428 aa17.67■□□□□ 0.42
VPS33B-208ENST00000574755 TMEM94Q12767 1356 aa17.67■□□□□ 0.42
VPS33B-208ENST00000574755 STRCP1A6NGW2 1772 aa17.67■□□□□ 0.42
VPS33B-208ENST00000574755 CHD1LQ86WJ1 897 aa17.66■□□□□ 0.42
VPS33B-208ENST00000574755 LRRC59Q96AG4 307 aaKnown RBP17.66■□□□□ 0.42
VPS33B-208ENST00000574755 TAF7Q15545 349 aaPredicted RBP17.66■□□□□ 0.42
VPS33B-208ENST00000574755 SIRT2Q8IXJ6 389 aa17.66■□□□□ 0.42
VPS33B-208ENST00000574755 DAXXQ9UER7 740 aaPredicted RBP17.66■□□□□ 0.42
VPS33B-208ENST00000574755 USP19O94966 1318 aa17.65■□□□□ 0.42
VPS33B-208ENST00000574755 STK31Q9BXU1 1019 aa17.65■□□□□ 0.42
VPS33B-208ENST00000574755 UPF2Q9HAU5 1272 aaKnown RBP17.65■□□□□ 0.42
VPS33B-208ENST00000574755 ANKRD45Q5TZF3 282 aa17.64■□□□□ 0.41
VPS33B-208ENST00000574755 MST1RQ04912 1400 aa17.64■□□□□ 0.41
VPS33B-208ENST00000574755 FAM208AQ9UK61 1670 aaKnown RBP17.64■□□□□ 0.41
VPS33B-208ENST00000574755 BABAM1Q9NWV8 329 aa17.64■□□□□ 0.41
VPS33B-208ENST00000574755 NBR1Q14596 966 aa17.63■□□□□ 0.41
VPS33B-208ENST00000574755 ALS2Q96Q42 1657 aa17.62■□□□□ 0.41
VPS33B-208ENST00000574755 CCDC30Q5VVM6 783 aa17.62■□□□□ 0.41
VPS33B-208ENST00000574755 G2E3Q7L622 706 aa17.62■□□□□ 0.41
VPS33B-208ENST00000574755 ANKRD24Q8TF21 1146 aa17.62■□□□□ 0.41
VPS33B-208ENST00000574755 DCCP43146 1447 aa17.62■□□□□ 0.41
VPS33B-208ENST00000574755 HSPA2P54652 639 aa17.62■□□□□ 0.41
VPS33B-208ENST00000574755 CEMIPQ8WUJ3 1361 aa17.62■□□□□ 0.41
VPS33B-208ENST00000574755 SLC4A3P48751 1232 aa17.61■□□□□ 0.41
VPS33B-208ENST00000574755 SLC4A10Q6U841 1118 aa17.61■□□□□ 0.41
VPS33B-208ENST00000574755 SOS1Q07889 1333 aaPredicted RBP17.61■□□□□ 0.41
VPS33B-208ENST00000574755 LMO7Q8WWI1 1683 aa17.6■□□□□ 0.41
VPS33B-208ENST00000574755 NCOA3Q9Y6Q9 1424 aa17.6■□□□□ 0.41
VPS33B-208ENST00000574755 RGPD5Q99666 1765 aa17.6■□□□□ 0.41
VPS33B-208ENST00000574755 PLEKHO1Q53GL0 409 aaPredicted RBP17.6■□□□□ 0.41
VPS33B-208ENST00000574755 NECTIN2Q92692 538 aa17.6■□□□□ 0.41
VPS33B-208ENST00000574755 CACNA1FO60840 1977 aa17.6■□□□□ 0.41
VPS33B-208ENST00000574755 F6X3S4 739 aa17.6■□□□□ 0.41
VPS33B-208ENST00000574755 ZNF530Q6P9A1 599 aaPredicted RBP17.6■□□□□ 0.41
VPS33B-208ENST00000574755 AXIN2Q9Y2T1 843 aa17.6■□□□□ 0.41
VPS33B-208ENST00000574755 AKAP4Q5JQC9 854 aa17.59■□□□□ 0.41
VPS33B-208ENST00000574755 DDX17Q92841 729 aaKnown RBP17.59■□□□□ 0.41
VPS33B-208ENST00000574755 MEIS3Q99687 375 aa17.59■□□□□ 0.41
VPS33B-208ENST00000574755 LGR6Q9HBX8 967 aa17.59■□□□□ 0.41
VPS33B-208ENST00000574755 ATP10DQ9P241 1426 aa17.59■□□□□ 0.41
VPS33B-208ENST00000574755 MED1Q15648 1581 aaPredicted RBP17.59■□□□□ 0.41
VPS33B-208ENST00000574755 ZC3H6P61129 1189 aaKnown RBP17.59■□□□□ 0.41
VPS33B-208ENST00000574755 AMOTQ4VCS5 1084 aa17.59■□□□□ 0.41
VPS33B-208ENST00000574755 CADPS2Q86UW7 1296 aa17.59■□□□□ 0.41
VPS33B-208ENST00000574755 NCAPD2Q15021 1401 aa17.59■□□□□ 0.41
VPS33B-208ENST00000574755 CCT4P50991 539 aaKnown RBP17.58■□□□□ 0.41
VPS33B-208ENST00000574755 FLIIQ13045 1269 aa17.58■□□□□ 0.41
VPS33B-208ENST00000574755 FKBP5Q13451 457 aaPredicted RBP17.58■□□□□ 0.4
VPS33B-208ENST00000574755 RPAP2Q8IXW5 612 aaPredicted RBP17.58■□□□□ 0.4
VPS33B-208ENST00000574755 ANKRD44Q8N8A2 993 aa17.58■□□□□ 0.4
VPS33B-208ENST00000574755 CAMTA1Q9Y6Y1 1673 aa17.58■□□□□ 0.4
VPS33B-208ENST00000574755 TEFQ10587 303 aa17.57■□□□□ 0.4
VPS33B-208ENST00000574755 C1orf141Q5JVX7 400 aa17.57■□□□□ 0.4
VPS33B-208ENST00000574755 TBC1D32Q96NH3 1257 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms