RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 RWDD1Q9H446 243 aaPredicted RBP9.43□□□□□ -0.9
RPA1-207ENST00000574049 KIAA1210Q9ULL0 1709 aa9.43□□□□□ -0.9
RPA1-207ENST00000574049 LAMC1P11047 1609 aa9.43□□□□□ -0.9
RPA1-207ENST00000574049 BRINP3Q76B58 766 aa9.43□□□□□ -0.9
RPA1-207ENST00000574049 MYO3AQ8NEV4 1616 aa9.43□□□□□ -0.9
RPA1-207ENST00000574049 PTMAP06454 111 aaKnown RBP9.43□□□□□ -0.9
RPA1-207ENST00000574049 TEFQ10587 303 aa9.43□□□□□ -0.9
RPA1-207ENST00000574049 C1orf141Q5JVX7 400 aa9.43□□□□□ -0.9
RPA1-207ENST00000574049 ZNF530Q6P9A1 599 aaPredicted RBP9.43□□□□□ -0.9
RPA1-207ENST00000574049 SLIT1O75093 1534 aa9.43□□□□□ -0.9
RPA1-207ENST00000574049 DUSP27Q5VZP5 1158 aa9.42□□□□□ -0.9
RPA1-207ENST00000574049 MPRIPQ6WCQ1 1025 aa9.42□□□□□ -0.9
RPA1-207ENST00000574049 CNKSR2Q8WXI2 1034 aa9.42□□□□□ -0.9
RPA1-207ENST00000574049 SYTL4Q96C24 671 aaPredicted RBP9.42□□□□□ -0.9
RPA1-207ENST00000574049 ATP7BP35670 1465 aa9.42□□□□□ -0.9
RPA1-207ENST00000574049 ARHGEF28Q8N1W1 1705 aaKnown RBP9.42□□□□□ -0.9
RPA1-207ENST00000574049 UBE2Q2Q8WVN8 375 aa9.42□□□□□ -0.9
RPA1-207ENST00000574049 LNPKQ9C0E8 428 aa9.42□□□□□ -0.9
RPA1-207ENST00000574049 TSPYL4Q9UJ04 414 aa9.42□□□□□ -0.9
RPA1-207ENST00000574049 IFT172Q9UG01 1749 aa9.42□□□□□ -0.9
RPA1-207ENST00000574049 CPS1P31327 1500 aa9.42□□□□□ -0.9
RPA1-207ENST00000574049 KRT24Q2M2I5 525 aa9.42□□□□□ -0.9
RPA1-207ENST00000574049 NBPF6Q5VWK0 638 aa9.42□□□□□ -0.9
RPA1-207ENST00000574049 NBPF4Q96M43 638 aa9.42□□□□□ -0.9
RPA1-207ENST00000574049 C1orf115Q9H7X2 142 aa9.42□□□□□ -0.9
RPA1-207ENST00000574049 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.41□□□□□ -0.9
RPA1-207ENST00000574049 RGL2O15211 777 aa9.41□□□□□ -0.9
RPA1-207ENST00000574049 HSP90B1P14625 803 aaKnown RBP9.41□□□□□ -0.9
RPA1-207ENST00000574049 TRIM6-TRIM34B2RNG4 842 aa9.41□□□□□ -0.9
RPA1-207ENST00000574049 IPO8O15397 1037 aaKnown RBP9.41□□□□□ -0.9
RPA1-207ENST00000574049 NFKBIBQ15653 356 aa9.41□□□□□ -0.9
RPA1-207ENST00000574049 MTHFSDQ2M296 383 aaKnown RBP9.41□□□□□ -0.9
RPA1-207ENST00000574049 TECPR2O15040 1411 aa9.41□□□□□ -0.9
RPA1-207ENST00000574049 ADGRL3Q9HAR2 1447 aa9.41□□□□□ -0.9
RPA1-207ENST00000574049 LMOD3Q0VAK6 560 aa9.41□□□□□ -0.9
RPA1-207ENST00000574049 HSCBQ8IWL3 235 aa9.41□□□□□ -0.9
RPA1-207ENST00000574049 MPNDQ8N594 471 aa9.41□□□□□ -0.9
RPA1-207ENST00000574049 FGD1P98174 961 aa9.4□□□□□ -0.9
RPA1-207ENST00000574049 CPSF1Q10570 1443 aaKnown RBP9.4□□□□□ -0.91
RPA1-207ENST00000574049 AXIN2Q9Y2T1 843 aa9.4□□□□□ -0.91
RPA1-207ENST00000574049 CD163L1Q9NR16 1453 aa9.4□□□□□ -0.91
RPA1-207ENST00000574049 PTCH1Q13635 1447 aa9.39□□□□□ -0.91
RPA1-207ENST00000574049 TOM1O60784 492 aa9.39□□□□□ -0.91
RPA1-207ENST00000574049 CALD1Q05682 793 aaKnown RBP9.39□□□□□ -0.91
RPA1-207ENST00000574049 IP6K1Q92551 441 aa9.39□□□□□ -0.91
RPA1-207ENST00000574049 CHMP3Q9Y3E7 222 aa9.39□□□□□ -0.91
RPA1-207ENST00000574049 DLC1Q96QB1 1528 aa9.39□□□□□ -0.91
RPA1-207ENST00000574049 FLT4P35916 1363 aa9.39□□□□□ -0.91
RPA1-207ENST00000574049 ADAMTSL3P82987 1691 aa9.39□□□□□ -0.91
RPA1-207ENST00000574049 GNAI1P63096 354 aa9.39□□□□□ -0.91
RPA1-207ENST00000574049 GAS2L2Q8NHY3 880 aa9.39□□□□□ -0.91
RPA1-207ENST00000574049 TNNQ9UQP3 1299 aa9.39□□□□□ -0.91
RPA1-207ENST00000574049 GOLGA6L22H0YM25 854 aa9.38□□□□□ -0.91
RPA1-207ENST00000574049 PLEKHO1Q53GL0 409 aaPredicted RBP9.38□□□□□ -0.91
RPA1-207ENST00000574049 TRIM35Q9UPQ4 493 aa9.38□□□□□ -0.91
RPA1-207ENST00000574049 TATP17735 454 aaPredicted RBP9.38□□□□□ -0.91
RPA1-207ENST00000574049 CASC1Q6TDU7 716 aa9.38□□□□□ -0.91
RPA1-207ENST00000574049 WDR63Q8IWG1 891 aa9.38□□□□□ -0.91
RPA1-207ENST00000574049 MED14O60244 1454 aa9.38□□□□□ -0.91
RPA1-207ENST00000574049 NKTRP30414 1462 aaKnown RBP9.38□□□□□ -0.91
RPA1-207ENST00000574049 ZKSCAN2Q63HK3 967 aa9.38□□□□□ -0.91
RPA1-207ENST00000574049 NRXN3Q9Y4C0 1643 aa9.38□□□□□ -0.91
RPA1-207ENST00000574049 SMG6Q86US8 1419 aaKnown RBP9.37□□□□□ -0.91
RPA1-207ENST00000574049 MS4A1P11836 297 aa9.37□□□□□ -0.91
RPA1-207ENST00000574049 MEX3CQ5U5Q3 659 aaKnown RBP9.37□□□□□ -0.91
RPA1-207ENST00000574049 TWISTNBQ3B726 338 aaPredicted RBP9.37□□□□□ -0.91
RPA1-207ENST00000574049 TSPYL6Q8N831 410 aa9.37□□□□□ -0.91
RPA1-207ENST00000574049 STK31Q9BXU1 1019 aa9.37□□□□□ -0.91
RPA1-207ENST00000574049 DIP2AQ14689 1571 aa9.37□□□□□ -0.91
RPA1-207ENST00000574049 C1orf167Q5SNV9 1468 aa9.37□□□□□ -0.91
RPA1-207ENST00000574049 GNAT3A8MTJ3 354 aa9.37□□□□□ -0.91
RPA1-207ENST00000574049 RILPL2Q969X0 211 aa9.37□□□□□ -0.91
RPA1-207ENST00000574049 ARHGEF25Q86VW2 580 aa9.36□□□□□ -0.91
RPA1-207ENST00000574049 PLEKHF1Q96S99 279 aa9.36□□□□□ -0.91
RPA1-207ENST00000574049 MBIPQ9NS73 344 aa9.36□□□□□ -0.91
RPA1-207ENST00000574049 BTG4Q9NY30 223 aa9.36□□□□□ -0.91
RPA1-207ENST00000574049 SSH1Q8WYL5 1049 aa9.36□□□□□ -0.91
RPA1-207ENST00000574049 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.36□□□□□ -0.91
RPA1-207ENST00000574049 NGLY1Q96IV0 654 aa9.36□□□□□ -0.91
RPA1-207ENST00000574049 LGR6Q9HBX8 967 aa9.36□□□□□ -0.91
RPA1-207ENST00000574049 SBNO1A3KN83 1393 aa9.36□□□□□ -0.91
RPA1-207ENST00000574049 NPHP1O15259 732 aa9.35□□□□□ -0.91
RPA1-207ENST00000574049 FAM161AQ3B820 660 aa9.35□□□□□ -0.91
RPA1-207ENST00000574049 CENPQQ7L2Z9 268 aaPredicted RBP9.35□□□□□ -0.91
RPA1-207ENST00000574049 DZIP1LQ8IYY4 767 aaKnown RBP9.35□□□□□ -0.91
RPA1-207ENST00000574049 NOB1Q9ULX3 412 aaKnown RBP9.35□□□□□ -0.91
RPA1-207ENST00000574049 KIAA0232Q92628 1395 aa9.35□□□□□ -0.91
RPA1-207ENST00000574049 C8orf58Q8NAV2 365 aa9.35□□□□□ -0.91
RPA1-207ENST00000574049 C8orf37Q96NL8 207 aa9.35□□□□□ -0.91
RPA1-207ENST00000574049 ANXA1P04083 346 aa9.35□□□□□ -0.91
RPA1-207ENST00000574049 HMGB1P09429 215 aaKnown RBP9.35□□□□□ -0.91
RPA1-207ENST00000574049 SLC39A6Q13433 755 aa9.35□□□□□ -0.91
RPA1-207ENST00000574049 PDE4CQ08493 712 aa9.34□□□□□ -0.91
RPA1-207ENST00000574049 AIMP1Q12904 312 aaKnown RBP9.34□□□□□ -0.91
RPA1-207ENST00000574049 L1TD1Q5T7N2 865 aaKnown RBP9.34□□□□□ -0.91
RPA1-207ENST00000574049 RARSP54136 660 aaKnown RBP9.34□□□□□ -0.91
RPA1-207ENST00000574049 PTCD1O75127 700 aaKnown RBP9.34□□□□□ -0.91
RPA1-207ENST00000574049 ANKARQ7Z5J8 1434 aa9.34□□□□□ -0.92
RPA1-207ENST00000574049 SLC4A2P04920 1241 aa9.33□□□□□ -0.92
RPA1-207ENST00000574049 ZMYND15Q9H091 742 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms