RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 KCNQ2O43526 872 aa37.84■■■■□ 3.65
SCARF1-207ENST00000573867 RAPGEF4Q8WZA2 1011 aa37.84■■■■□ 3.65
SCARF1-207ENST00000573867 NHSQ6T4R5 1651 aa37.82■■■■□ 3.65
SCARF1-207ENST00000573867 ACSBG1Q96GR2 724 aa37.82■■■■□ 3.64
SCARF1-207ENST00000573867 TATP17735 454 aaPredicted RBP37.81■■■■□ 3.64
SCARF1-207ENST00000573867 CNGB1Q14028 1251 aaPredicted RBP37.81■■■■□ 3.64
SCARF1-207ENST00000573867 RREB1Q92766 1687 aa37.8■■■■□ 3.64
SCARF1-207ENST00000573867 PARD3Q8TEW0 1356 aa37.79■■■■□ 3.64
SCARF1-207ENST00000573867 IGSF1Q8N6C5 1336 aa37.76■■■■□ 3.64
SCARF1-207ENST00000573867 PKD1L3Q7Z443 1732 aa37.75■■■■□ 3.63
SCARF1-207ENST00000573867 MTHFSP49914 203 aa37.74■■■■□ 3.63
SCARF1-207ENST00000573867 NUP188Q5SRE5 1749 aa37.74■■■■□ 3.63
SCARF1-207ENST00000573867 RGPD3A6NKT7 1758 aaPredicted RBP37.73■■■■□ 3.63
SCARF1-207ENST00000573867 RGPD4Q7Z3J3 1758 aa37.73■■■■□ 3.63
SCARF1-207ENST00000573867 PLSCR1O15162 318 aa37.73■■■■□ 3.63
SCARF1-207ENST00000573867 DOT1LQ8TEK3 1739 aa37.7■■■■□ 3.63
SCARF1-207ENST00000573867 CYP27B1O15528 508 aa37.69■■■■□ 3.62
SCARF1-207ENST00000573867 IL13P35225 146 aa37.69■■■■□ 3.62
SCARF1-207ENST00000573867 PROM2Q8N271 834 aa37.68■■■■□ 3.62
SCARF1-207ENST00000573867 BTAF1O14981 1849 aa37.68■■■■□ 3.62
SCARF1-207ENST00000573867 PCDH11XQ9BZA7 1347 aa37.67■■■■□ 3.62
SCARF1-207ENST00000573867 PCDH11YQ9BZA8 1340 aa37.67■■■■□ 3.62
SCARF1-207ENST00000573867 PSDA5PKW4 1024 aaPredicted RBP37.65■■■■□ 3.62
SCARF1-207ENST00000573867 AEBP1Q8IUX7 1158 aa37.65■■■■□ 3.62
SCARF1-207ENST00000573867 PRIM1P49642 420 aaKnown RBP37.63■■■■□ 3.61
SCARF1-207ENST00000573867 COL3A1P02461 1466 aaPredicted RBP37.63■■■■□ 3.61
SCARF1-207ENST00000573867 SRCAPQ6ZRS2 3230 aa37.61■■■■□ 3.61
SCARF1-207ENST00000573867 R3HDM1Q15032 1099 aaKnown RBP37.6■■■■□ 3.61
SCARF1-207ENST00000573867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP37.6■■■■□ 3.61
SCARF1-207ENST00000573867 SPG7Q9UQ90 795 aa37.6■■■■□ 3.61
SCARF1-207ENST00000573867 TOGARAM1Q9Y4F4 1720 aa37.6■■■■□ 3.61
SCARF1-207ENST00000573867 KDRP35968 1356 aa37.58■■■■□ 3.61
SCARF1-207ENST00000573867 TXNRD1Q16881 649 aa37.58■■■■□ 3.61
SCARF1-207ENST00000573867 SYTL4Q96C24 671 aaPredicted RBP37.58■■■■□ 3.61
SCARF1-207ENST00000573867 ZEB1P37275 1124 aaPredicted RBP37.57■■■■□ 3.6
SCARF1-207ENST00000573867 SULT6B1Q6IMI4 303 aa37.57■■■■□ 3.6
SCARF1-207ENST00000573867 PLEKHG2Q9H7P9 1386 aa37.56■■■■□ 3.6
SCARF1-207ENST00000573867 KAT6BQ8WYB5 2073 aa37.56■■■■□ 3.6
SCARF1-207ENST00000573867 ANO8Q9HCE9 1232 aaPredicted RBP37.55■■■■□ 3.6
SCARF1-207ENST00000573867 NKX1-1Q15270 411 aaPredicted RBP37.54■■■■□ 3.6
SCARF1-207ENST00000573867 DIAPH1O60610 1272 aaKnown RBP37.52■■■■□ 3.6
SCARF1-207ENST00000573867 PHKG2P15735 406 aa37.52■■■■□ 3.6
SCARF1-207ENST00000573867 PPP2R1AP30153 589 aa37.51■■■■□ 3.6
SCARF1-207ENST00000573867 DDX10Q13206 875 aaKnown RBP37.48■■■■□ 3.59
SCARF1-207ENST00000573867 NBPF14Q5TI25 921 aa37.48■■■■□ 3.59
SCARF1-207ENST00000573867 IFNL2Q8IZJ0 200 aa37.48■■■■□ 3.59
SCARF1-207ENST00000573867 HMOX1P09601 288 aa37.47■■■■□ 3.59
SCARF1-207ENST00000573867 LRRC4BQ9NT99 713 aa37.46■■■■□ 3.59
SCARF1-207ENST00000573867 PAPPAQ13219 1627 aa37.46■■■■□ 3.59
SCARF1-207ENST00000573867 PLEKHO1Q53GL0 409 aaPredicted RBP37.45■■■■□ 3.59
SCARF1-207ENST00000573867 ITGB4P16144 1822 aa37.45■■■■□ 3.59
SCARF1-207ENST00000573867 LY75O60449 1722 aa37.43■■■■□ 3.58
SCARF1-207ENST00000573867 AMOTQ4VCS5 1084 aa37.42■■■■□ 3.58
SCARF1-207ENST00000573867 ZNF530Q6P9A1 599 aaPredicted RBP37.42■■■■□ 3.58
SCARF1-207ENST00000573867 MPRIPQ6WCQ1 1025 aa37.42■■■■□ 3.58
SCARF1-207ENST00000573867 KCNQ4P56696 695 aa37.4■■■■□ 3.58
SCARF1-207ENST00000573867 KDM6AO15550 1401 aaPredicted RBP37.39■■■■□ 3.58
SCARF1-207ENST00000573867 PIGBQ92521 554 aa37.39■■■■□ 3.58
SCARF1-207ENST00000573867 U2SURPO15042 1029 aaKnown RBP37.37■■■■□ 3.57
SCARF1-207ENST00000573867 CFAP53Q96M91 514 aa37.35■■■■□ 3.57
SCARF1-207ENST00000573867 SLC27A3Q5K4L6 730 aa37.34■■■■□ 3.57
SCARF1-207ENST00000573867 SLC15A2Q16348 729 aa37.33■■■■□ 3.57
SCARF1-207ENST00000573867 ZNF827Q17R98 1081 aa37.33■■■■□ 3.57
SCARF1-207ENST00000573867 PDGFDQ9GZP0 370 aaPredicted RBP37.33■■■■□ 3.57
SCARF1-207ENST00000573867 LRP5O75197 1615 aa37.32■■■■□ 3.57
SCARF1-207ENST00000573867 PALLDQ8WX93 1383 aa37.32■■■■□ 3.57
SCARF1-207ENST00000573867 DCAF5Q96JK2 942 aa37.32■■■■□ 3.56
SCARF1-207ENST00000573867 STK32BQ9NY57 414 aa37.32■■■■□ 3.56
SCARF1-207ENST00000573867 TMOD3Q9NYL9 352 aa37.31■■■■□ 3.56
SCARF1-207ENST00000573867 CASZ1Q86V15 1759 aa37.31■■■■□ 3.56
SCARF1-207ENST00000573867 HSP90AB1P08238 724 aaKnown RBP37.3■■■■□ 3.56
SCARF1-207ENST00000573867 C1orf141Q5JVX7 400 aa37.29■■■■□ 3.56
SCARF1-207ENST00000573867 CCNL1Q9UK58 526 aaPredicted RBP37.29■■■■□ 3.56
SCARF1-207ENST00000573867 MTHFSDQ2M296 383 aaKnown RBP37.28■■■■□ 3.56
SCARF1-207ENST00000573867 AKT1S1Q96B36 256 aa37.27■■■■□ 3.56
SCARF1-207ENST00000573867 ERVV-2B6SEH9 535 aa37.26■■■■□ 3.56
SCARF1-207ENST00000573867 ASAP1Q9ULH1 1129 aa37.26■■■■□ 3.56
SCARF1-207ENST00000573867 AKAP4Q5JQC9 854 aa37.24■■■■□ 3.55
SCARF1-207ENST00000573867 RSPH6AQ9H0K4 717 aa37.24■■■■□ 3.55
SCARF1-207ENST00000573867 SMARCC1Q92922 1105 aaPredicted RBP37.23■■■■□ 3.55
SCARF1-207ENST00000573867 ATG3Q9NT62 314 aa37.23■■■■□ 3.55
SCARF1-207ENST00000573867 RALBP1Q15311 655 aa37.21■■■■□ 3.55
SCARF1-207ENST00000573867 NUDCQ9Y266 331 aa37.21■■■■□ 3.55
SCARF1-207ENST00000573867 SCN11AQ9UI33 1791 aa37.21■■■■□ 3.55
SCARF1-207ENST00000573867 U2AF1L5P0DN76 240 aaPredicted RBP37.19■■■■□ 3.54
SCARF1-207ENST00000573867 PRKAR2BP31323 418 aa37.19■■■■□ 3.54
SCARF1-207ENST00000573867 U2AF1Q01081 240 aaKnown RBP eCLIP37.19■■■■□ 3.54
SCARF1-207ENST00000573867 LGR6Q9HBX8 967 aa37.19■■■■□ 3.54
SCARF1-207ENST00000573867 C5P01031 1676 aa37.18■■■■□ 3.54
SCARF1-207ENST00000573867 TUBGCP6Q96RT7 1819 aa37.18■■■■□ 3.54
SCARF1-207ENST00000573867 CABP4P57796 275 aa37.18■■■■□ 3.54
SCARF1-207ENST00000573867 PHACTR3Q96KR7 559 aa37.18■■■■□ 3.54
SCARF1-207ENST00000573867 ADAMTS7Q9UKP4 1686 aa37.18■■■■□ 3.54
SCARF1-207ENST00000573867 TAF1LQ8IZX4 1826 aa37.16■■■■□ 3.54
SCARF1-207ENST00000573867 LOC102724428A0A0B4J2F2 783 aa37.15■■■■□ 3.54
SCARF1-207ENST00000573867 SIK1P57059 783 aa37.15■■■■□ 3.54
SCARF1-207ENST00000573867 NFATC2IPQ8NCF5 419 aa37.15■■■■□ 3.54
SCARF1-207ENST00000573867 RNMTO43148 476 aaKnown RBP37.14■■■■□ 3.54
SCARF1-207ENST00000573867 MRC1P22897 1456 aa37.13■■■■□ 3.54
SCARF1-207ENST00000573867 QSER1Q2KHR3 1735 aa37.13■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms