RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 MAP2P11137 1827 aaKnown RBP18.39■□□□□ 0.53
RPAIN-213ENST00000573577 MEGF6O75095 1541 aa18.39■□□□□ 0.53
RPAIN-213ENST00000573577 APBA3O96018 575 aa18.38■□□□□ 0.53
RPAIN-213ENST00000573577 DDX10Q13206 875 aaKnown RBP18.37■□□□□ 0.53
RPAIN-213ENST00000573577 RAPGEF4Q8WZA2 1011 aa18.36■□□□□ 0.53
RPAIN-213ENST00000573577 SBF2Q86WG5 1849 aa18.35■□□□□ 0.53
RPAIN-213ENST00000573577 NCAPD2Q15021 1401 aa18.35■□□□□ 0.53
RPAIN-213ENST00000573577 PARD3Q8TEW0 1356 aa18.35■□□□□ 0.53
RPAIN-213ENST00000573577 CAMKK2Q96RR4 588 aa18.35■□□□□ 0.53
RPAIN-213ENST00000573577 BCL11BQ9C0K0 894 aaPredicted RBP18.35■□□□□ 0.53
RPAIN-213ENST00000573577 EZH2Q15910 746 aaKnown RBP18.34■□□□□ 0.53
RPAIN-213ENST00000573577 TATP17735 454 aaPredicted RBP18.33■□□□□ 0.52
RPAIN-213ENST00000573577 EIF4A2Q14240 407 aaKnown RBP18.33■□□□□ 0.52
RPAIN-213ENST00000573577 ZCRB1Q8TBF4 217 aaKnown RBP18.33■□□□□ 0.52
RPAIN-213ENST00000573577 DDX54Q8TDD1 881 aaKnown RBP18.33■□□□□ 0.52
RPAIN-213ENST00000573577 CNGB1Q14028 1251 aaPredicted RBP18.32■□□□□ 0.52
RPAIN-213ENST00000573577 PTF1AQ7RTS3 328 aa18.32■□□□□ 0.52
RPAIN-213ENST00000573577 EYA1Q99502 592 aa18.32■□□□□ 0.52
RPAIN-213ENST00000573577 DCAF8L1A6NGE4 600 aa18.31■□□□□ 0.52
RPAIN-213ENST00000573577 SHANK3Q9BYB0 1731 aa18.31■□□□□ 0.52
RPAIN-213ENST00000573577 NHSQ6T4R5 1651 aa18.31■□□□□ 0.52
RPAIN-213ENST00000573577 ACSBG1Q96GR2 724 aa18.3■□□□□ 0.52
RPAIN-213ENST00000573577 RREB1Q92766 1687 aa18.29■□□□□ 0.52
RPAIN-213ENST00000573577 PLSCR1O15162 318 aa18.29■□□□□ 0.52
RPAIN-213ENST00000573577 KCNQ2O43526 872 aa18.29■□□□□ 0.52
RPAIN-213ENST00000573577 RGPD3A6NKT7 1758 aaPredicted RBP18.29■□□□□ 0.52
RPAIN-213ENST00000573577 RGPD4Q7Z3J3 1758 aa18.29■□□□□ 0.52
RPAIN-213ENST00000573577 IGSF1Q8N6C5 1336 aa18.28■□□□□ 0.52
RPAIN-213ENST00000573577 PCDH11XQ9BZA7 1347 aa18.27■□□□□ 0.52
RPAIN-213ENST00000573577 PCDH11YQ9BZA8 1340 aa18.27■□□□□ 0.52
RPAIN-213ENST00000573577 MTHFSP49914 203 aa18.26■□□□□ 0.51
RPAIN-213ENST00000573577 NUP188Q5SRE5 1749 aa18.26■□□□□ 0.51
RPAIN-213ENST00000573577 PKD1L3Q7Z443 1732 aa18.26■□□□□ 0.51
RPAIN-213ENST00000573577 PLEKHG2Q9H7P9 1386 aa18.25■□□□□ 0.51
RPAIN-213ENST00000573577 RALBP1Q15311 655 aa18.24■□□□□ 0.51
RPAIN-213ENST00000573577 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.24■□□□□ 0.512e-8■□□□□ 9.4
RPAIN-213ENST00000573577 SPG7Q9UQ90 795 aa18.24■□□□□ 0.51
RPAIN-213ENST00000573577 DOT1LQ8TEK3 1739 aa18.23■□□□□ 0.51
RPAIN-213ENST00000573577 CYP27B1O15528 508 aa18.23■□□□□ 0.51
RPAIN-213ENST00000573577 IL13P35225 146 aa18.23■□□□□ 0.51
RPAIN-213ENST00000573577 BTAF1O14981 1849 aa18.22■□□□□ 0.51
RPAIN-213ENST00000573577 PSDA5PKW4 1024 aaPredicted RBP18.22■□□□□ 0.51
RPAIN-213ENST00000573577 PRIM1P49642 420 aaKnown RBP18.22■□□□□ 0.51
RPAIN-213ENST00000573577 SYTL4Q96C24 671 aaPredicted RBP18.22■□□□□ 0.51
RPAIN-213ENST00000573577 PPP2R1AP30153 589 aa18.21■□□□□ 0.51
RPAIN-213ENST00000573577 R3HDM1Q15032 1099 aaKnown RBP18.21■□□□□ 0.51
RPAIN-213ENST00000573577 PROM2Q8N271 834 aa18.21■□□□□ 0.51
RPAIN-213ENST00000573577 CFAP53Q96M91 514 aa18.21■□□□□ 0.51
RPAIN-213ENST00000573577 TXNRD1Q16881 649 aa18.2■□□□□ 0.5
RPAIN-213ENST00000573577 NBPF14Q5TI25 921 aa18.2■□□□□ 0.5
RPAIN-213ENST00000573577 AEBP1Q8IUX7 1158 aa18.2■□□□□ 0.5
RPAIN-213ENST00000573577 KDRP35968 1356 aa18.19■□□□□ 0.5
RPAIN-213ENST00000573577 DIAPH1O60610 1272 aaKnown RBP18.18■□□□□ 0.5
RPAIN-213ENST00000573577 SULT6B1Q6IMI4 303 aa18.18■□□□□ 0.5
RPAIN-213ENST00000573577 SRCAPQ6ZRS2 3230 aa18.17■□□□□ 0.5
RPAIN-213ENST00000573577 PHKG2P15735 406 aa18.17■□□□□ 0.5
RPAIN-213ENST00000573577 NKX1-1Q15270 411 aaPredicted RBP18.17■□□□□ 0.5
RPAIN-213ENST00000573577 COL3A1P02461 1466 aaPredicted RBP18.17■□□□□ 0.5
RPAIN-213ENST00000573577 IFNL2Q8IZJ0 200 aa18.16■□□□□ 0.5
RPAIN-213ENST00000573577 KAT6BQ8WYB5 2073 aa18.16■□□□□ 0.5
RPAIN-213ENST00000573577 TOGARAM1Q9Y4F4 1720 aa18.15■□□□□ 0.5
RPAIN-213ENST00000573577 AMOTQ4VCS5 1084 aa18.15■□□□□ 0.5
RPAIN-213ENST00000573577 PLEKHO1Q53GL0 409 aaPredicted RBP18.15■□□□□ 0.5
RPAIN-213ENST00000573577 ANO8Q9HCE9 1232 aaPredicted RBP18.15■□□□□ 0.5
RPAIN-213ENST00000573577 MYBBP1AQ9BQG0 1328 aaKnown RBP18.15■□□□□ 0.5
RPAIN-213ENST00000573577 PRKRIP1Q9H875 184 aaPredicted RBP18.14■□□□□ 0.49
RPAIN-213ENST00000573577 NUDCQ9Y266 331 aa18.14■□□□□ 0.49
RPAIN-213ENST00000573577 HMOX1P09601 288 aa18.12■□□□□ 0.49
RPAIN-213ENST00000573577 SLC27A3Q5K4L6 730 aa18.12■□□□□ 0.49
RPAIN-213ENST00000573577 ZNF530Q6P9A1 599 aaPredicted RBP18.12■□□□□ 0.49
RPAIN-213ENST00000573577 MPRIPQ6WCQ1 1025 aa18.12■□□□□ 0.49
RPAIN-213ENST00000573577 LRRC4BQ9NT99 713 aa18.12■□□□□ 0.49
RPAIN-213ENST00000573577 PAPPAQ13219 1627 aa18.12■□□□□ 0.49
RPAIN-213ENST00000573577 ANP32CO43423 234 aa18.11■□□□□ 0.49
RPAIN-213ENST00000573577 STK32BQ9NY57 414 aa18.11■□□□□ 0.49
RPAIN-213ENST00000573577 LY75O60449 1722 aa18.1■□□□□ 0.49
RPAIN-213ENST00000573577 U2SURPO15042 1029 aaKnown RBP18.1■□□□□ 0.49
RPAIN-213ENST00000573577 HSP90AB1P08238 724 aaKnown RBP18.1■□□□□ 0.49
RPAIN-213ENST00000573577 ITGB4P16144 1822 aa18.09■□□□□ 0.49
RPAIN-213ENST00000573577 LRP5O75197 1615 aa18.09■□□□□ 0.49
RPAIN-213ENST00000573577 SLC15A2Q16348 729 aa18.09■□□□□ 0.49
RPAIN-213ENST00000573577 C1orf141Q5JVX7 400 aa18.09■□□□□ 0.49
RPAIN-213ENST00000573577 PIGBQ92521 554 aa18.09■□□□□ 0.49
RPAIN-213ENST00000573577 DCAF5Q96JK2 942 aa18.09■□□□□ 0.49
RPAIN-213ENST00000573577 TMOD3Q9NYL9 352 aa18.09■□□□□ 0.49
RPAIN-213ENST00000573577 PALLDQ8WX93 1383 aa18.08■□□□□ 0.49
RPAIN-213ENST00000573577 KDM6AO15550 1401 aaPredicted RBP18.07■□□□□ 0.48
RPAIN-213ENST00000573577 KCNQ4P56696 695 aa18.07■□□□□ 0.48
RPAIN-213ENST00000573577 SMARCC1Q92922 1105 aaPredicted RBP18.07■□□□□ 0.48
RPAIN-213ENST00000573577 CCNL1Q9UK58 526 aaPredicted RBP18.07■□□□□ 0.48
RPAIN-213ENST00000573577 ERVV-2B6SEH9 535 aa18.06■□□□□ 0.48
RPAIN-213ENST00000573577 ZNF827Q17R98 1081 aa18.05■□□□□ 0.48
RPAIN-213ENST00000573577 AKAP4Q5JQC9 854 aa18.05■□□□□ 0.48
RPAIN-213ENST00000573577 CASZ1Q86V15 1759 aa18.04■□□□□ 0.48
RPAIN-213ENST00000573577 U2AF1L5P0DN76 240 aaPredicted RBP18.04■□□□□ 0.48
RPAIN-213ENST00000573577 U2AF1Q01081 240 aaKnown RBP eCLIP18.04■□□□□ 0.48
RPAIN-213ENST00000573577 AKT1S1Q96B36 256 aa18.04■□□□□ 0.48
RPAIN-213ENST00000573577 MTHFSDQ2M296 383 aaKnown RBP18.03■□□□□ 0.48
RPAIN-213ENST00000573577 PDGFDQ9GZP0 370 aaPredicted RBP18.03■□□□□ 0.48
RPAIN-213ENST00000573577 CABP4P57796 275 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms