RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 LTBP4Q8N2S1 1624 aa7.92□□□□□ -1.14
TRAPPC1-204ENST00000571947 ROBO1Q9Y6N7 1651 aa7.92□□□□□ -1.14
TRAPPC1-204ENST00000571947 FAM83GA6ND36 823 aa7.92□□□□□ -1.14
TRAPPC1-204ENST00000571947 HTATSF1O43719 755 aaKnown RBP7.92□□□□□ -1.14
TRAPPC1-204ENST00000571947 MTHFSDQ2M296 383 aaKnown RBP7.92□□□□□ -1.14
TRAPPC1-204ENST00000571947 BRINP3Q76B58 766 aa7.92□□□□□ -1.14
TRAPPC1-204ENST00000571947 DDX17Q92841 729 aaKnown RBP7.92□□□□□ -1.14
TRAPPC1-204ENST00000571947 ZNF428Q96B54 188 aa7.92□□□□□ -1.14
TRAPPC1-204ENST00000571947 LTV1Q96GA3 475 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC1-204ENST00000571947 CFAP44Q96MT7 982 aa7.92□□□□□ -1.14
TRAPPC1-204ENST00000571947 CRB1P82279 1406 aa7.92□□□□□ -1.14
TRAPPC1-204ENST00000571947 ZBTB7CA1YPR0 619 aa7.91□□□□□ -1.14
TRAPPC1-204ENST00000571947 CANXP27824 592 aaKnown RBP7.91□□□□□ -1.14
TRAPPC1-204ENST00000571947 DCTN1Q14203 1278 aa7.91□□□□□ -1.14
TRAPPC1-204ENST00000571947 ALDH1L2Q3SY69 923 aa7.91□□□□□ -1.14
TRAPPC1-204ENST00000571947 MBIPQ9NS73 344 aa7.91□□□□□ -1.14
TRAPPC1-204ENST00000571947 SLAIN2Q9P270 581 aa7.91□□□□□ -1.14
TRAPPC1-204ENST00000571947 LAS1LQ9Y4W2 734 aaKnown RBP7.91□□□□□ -1.14
TRAPPC1-204ENST00000571947 COL22A1Q8NFW1 1626 aaPredicted RBP7.91□□□□□ -1.14
TRAPPC1-204ENST00000571947 WNK3Q9BYP7 1800 aa7.9□□□□□ -1.14
TRAPPC1-204ENST00000571947 AHDC1Q5TGY3 1603 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC1-204ENST00000571947 MAP3K5Q99683 1374 aa7.9□□□□□ -1.14
TRAPPC1-204ENST00000571947 SOS2Q07890 1332 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC1-204ENST00000571947 CHL1O00533 1208 aa7.9□□□□□ -1.14
TRAPPC1-204ENST00000571947 MS4A1P11836 297 aa7.9□□□□□ -1.14
TRAPPC1-204ENST00000571947 BRPF1P55201 1214 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC1-204ENST00000571947 NBPF6Q5VWK0 638 aa7.9□□□□□ -1.14
TRAPPC1-204ENST00000571947 SSH1Q8WYL5 1049 aa7.9□□□□□ -1.14
TRAPPC1-204ENST00000571947 NBPF4Q96M43 638 aa7.9□□□□□ -1.14
TRAPPC1-204ENST00000571947 PHLPP1O60346 1717 aa7.89□□□□□ -1.15
TRAPPC1-204ENST00000571947 SHANK3Q9BYB0 1731 aa7.89□□□□□ -1.15
TRAPPC1-204ENST00000571947 CPDO75976 1380 aa7.89□□□□□ -1.15
TRAPPC1-204ENST00000571947 KIAA0232Q92628 1395 aa7.89□□□□□ -1.15
TRAPPC1-204ENST00000571947 VAMP4O75379 141 aa7.89□□□□□ -1.15
TRAPPC1-204ENST00000571947 ZC3H6P61129 1189 aaKnown RBP7.89□□□□□ -1.15
TRAPPC1-204ENST00000571947 AAMPQ13685 434 aa7.89□□□□□ -1.15
TRAPPC1-204ENST00000571947 ZKSCAN2Q63HK3 967 aa7.89□□□□□ -1.15
TRAPPC1-204ENST00000571947 MCM10Q7L590 875 aa7.89□□□□□ -1.15
TRAPPC1-204ENST00000571947 ANKRD24Q8TF21 1146 aa7.89□□□□□ -1.15
TRAPPC1-204ENST00000571947 RTF1Q92541 710 aaKnown RBP7.89□□□□□ -1.15
TRAPPC1-204ENST00000571947 FRAT1Q92837 279 aaPredicted RBP7.89□□□□□ -1.15
TRAPPC1-204ENST00000571947 BCL2L13Q9BXK5 485 aa7.89□□□□□ -1.15
TRAPPC1-204ENST00000571947 SMC4Q9NTJ3 1288 aa7.89□□□□□ -1.15
TRAPPC1-204ENST00000571947 KIF16BQ96L93 1317 aa7.88□□□□□ -1.15
TRAPPC1-204ENST00000571947 GNAT3A8MTJ3 354 aa7.88□□□□□ -1.15
TRAPPC1-204ENST00000571947 PLEKHG5O94827 1062 aa7.88□□□□□ -1.15
TRAPPC1-204ENST00000571947 TWISTNBQ3B726 338 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC1-204ENST00000571947 USHBP1Q8N6Y0 703 aa7.88□□□□□ -1.15
TRAPPC1-204ENST00000571947 PANK1Q8TE04 598 aa7.88□□□□□ -1.15
TRAPPC1-204ENST00000571947 LRRC59Q96AG4 307 aaKnown RBP7.88□□□□□ -1.15
TRAPPC1-204ENST00000571947 AXIN2Q9Y2T1 843 aa7.88□□□□□ -1.15
TRAPPC1-204ENST00000571947 COL14A1Q05707 1796 aaKnown RBP7.88□□□□□ -1.15
TRAPPC1-204ENST00000571947 OVOS2A0A0G2JMS6 1433 aa7.87□□□□□ -1.15
TRAPPC1-204ENST00000571947 PLEKHG2Q9H7P9 1386 aa7.87□□□□□ -1.15
TRAPPC1-204ENST00000571947 ERBB3P21860 1342 aa7.87□□□□□ -1.15
TRAPPC1-204ENST00000571947 IPO8O15397 1037 aaKnown RBP7.87□□□□□ -1.15
TRAPPC1-204ENST00000571947 HAP1P54257 671 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC1-204ENST00000571947 PLEKHO1Q53GL0 409 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC1-204ENST00000571947 DZIP1LQ8IYY4 767 aaKnown RBP7.87□□□□□ -1.15
TRAPPC1-204ENST00000571947 MRPL50Q8N5N7 158 aaKnown RBP7.87□□□□□ -1.15
TRAPPC1-204ENST00000571947 TSPYL6Q8N831 410 aa7.87□□□□□ -1.15
TRAPPC1-204ENST00000571947 C8orf58Q8NAV2 365 aa7.87□□□□□ -1.15
TRAPPC1-204ENST00000571947 CABLES1Q8TDN4 633 aa7.87□□□□□ -1.15
TRAPPC1-204ENST00000571947 TSHZ2Q9NRE2 1034 aa7.87□□□□□ -1.15
TRAPPC1-204ENST00000571947 BABAM1Q9NWV8 329 aa7.87□□□□□ -1.15
TRAPPC1-204ENST00000571947 TNNQ9UQP3 1299 aa7.87□□□□□ -1.15
TRAPPC1-204ENST00000571947 COG6Q9Y2V7 657 aa7.87□□□□□ -1.15
TRAPPC1-204ENST00000571947 KDM2BQ8NHM5 1336 aa7.86□□□□□ -1.15
TRAPPC1-204ENST00000571947 RLBP1P12271 317 aa7.86□□□□□ -1.15
TRAPPC1-204ENST00000571947 AMOTQ4VCS5 1084 aa7.86□□□□□ -1.15
TRAPPC1-204ENST00000571947 ATF7IPQ6VMQ6 1270 aa7.86□□□□□ -1.15
TRAPPC1-204ENST00000571947 IL17REQ8NFR9 667 aa7.86□□□□□ -1.15
TRAPPC1-204ENST00000571947 ARHGAP45Q92619 1136 aa7.86□□□□□ -1.15
TRAPPC1-204ENST00000571947 NOB1Q9ULX3 412 aaKnown RBP7.86□□□□□ -1.15
TRAPPC1-204ENST00000571947 ITGB4P16144 1822 aa7.86□□□□□ -1.15
TRAPPC1-204ENST00000571947 C5P01031 1676 aa7.86□□□□□ -1.15
TRAPPC1-204ENST00000571947 PLCH1Q4KWH8 1693 aa7.86□□□□□ -1.15
TRAPPC1-204ENST00000571947 COL16A1Q07092 1604 aaPredicted RBP7.85□□□□□ -1.15
TRAPPC1-204ENST00000571947 CEMIPQ8WUJ3 1361 aa7.85□□□□□ -1.15
TRAPPC1-204ENST00000571947 LAMB4A4D0S4 1761 aa7.85□□□□□ -1.15
TRAPPC1-204ENST00000571947 TRIM27P14373 513 aa7.85□□□□□ -1.15
TRAPPC1-204ENST00000571947 MVPQ14764 893 aaKnown RBP7.85□□□□□ -1.15
TRAPPC1-204ENST00000571947 AKAP4Q5JQC9 854 aa7.85□□□□□ -1.15
TRAPPC1-204ENST00000571947 CENPQQ7L2Z9 268 aaPredicted RBP7.85□□□□□ -1.15
TRAPPC1-204ENST00000571947 CLUAP1Q96AJ1 413 aa7.85□□□□□ -1.15
TRAPPC1-204ENST00000571947 TSPYL4Q9UJ04 414 aa7.85□□□□□ -1.15
TRAPPC1-204ENST00000571947 KAT6BQ8WYB5 2073 aa7.85□□□□□ -1.15
TRAPPC1-204ENST00000571947 SOS1Q07889 1333 aaPredicted RBP7.84□□□□□ -1.15
TRAPPC1-204ENST00000571947 ELL2O00472 640 aaPredicted RBP7.84□□□□□ -1.15
TRAPPC1-204ENST00000571947 TAF7Q15545 349 aaPredicted RBP7.84□□□□□ -1.15
TRAPPC1-204ENST00000571947 CHRNA2Q15822 529 aa7.84□□□□□ -1.15
TRAPPC1-204ENST00000571947 ZNF530Q6P9A1 599 aaPredicted RBP7.84□□□□□ -1.15
TRAPPC1-204ENST00000571947 FTSJ3Q8IY81 847 aaKnown RBP7.84□□□□□ -1.15
TRAPPC1-204ENST00000571947 UBR2Q8IWV8 1755 aa7.84□□□□□ -1.15
TRAPPC1-204ENST00000571947 NRAPQ86VF7 1730 aa7.83□□□□□ -1.16
TRAPPC1-204ENST00000571947 NWD2Q9ULI1 1742 aa7.83□□□□□ -1.16
TRAPPC1-204ENST00000571947 MEGF6O75095 1541 aa7.83□□□□□ -1.16
TRAPPC1-204ENST00000571947 COL5A2P05997 1499 aaPredicted RBP7.83□□□□□ -1.16
TRAPPC1-204ENST00000571947 TATP17735 454 aaPredicted RBP7.83□□□□□ -1.16
TRAPPC1-204ENST00000571947 KRT24Q2M2I5 525 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms