RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 SMG6Q86US8 1419 aaKnown RBP14□□□□□ -0.17
GTF3C1-213ENST00000571886 ZCRB1Q8TBF4 217 aaKnown RBP14□□□□□ -0.17
GTF3C1-213ENST00000571886 PSDA5PKW4 1024 aaPredicted RBP13.99□□□□□ -0.17
GTF3C1-213ENST00000571886 PROM2Q8N271 834 aa13.99□□□□□ -0.17
GTF3C1-213ENST00000571886 NCAPD2Q15021 1401 aa13.98□□□□□ -0.17
GTF3C1-213ENST00000571886 TATP17735 454 aaPredicted RBP13.98□□□□□ -0.17
GTF3C1-213ENST00000571886 RAPGEF4Q8WZA2 1011 aa13.98□□□□□ -0.17
GTF3C1-213ENST00000571886 RREB1Q92766 1687 aa13.98□□□□□ -0.17
GTF3C1-213ENST00000571886 PLSCR1O15162 318 aa13.97□□□□□ -0.17
GTF3C1-213ENST00000571886 NUP188Q5SRE5 1749 aa13.97□□□□□ -0.17
GTF3C1-213ENST00000571886 NHSQ6T4R5 1651 aa13.97□□□□□ -0.17
GTF3C1-213ENST00000571886 MTHFSP49914 203 aa13.96□□□□□ -0.17
GTF3C1-213ENST00000571886 BTAF1O14981 1849 aa13.95□□□□□ -0.18
GTF3C1-213ENST00000571886 CYP27B1O15528 508 aa13.95□□□□□ -0.18
GTF3C1-213ENST00000571886 PRIM1P49642 420 aaKnown RBP13.95□□□□□ -0.18
GTF3C1-213ENST00000571886 R3HDM1Q15032 1099 aaKnown RBP13.95□□□□□ -0.18
GTF3C1-213ENST00000571886 IL13P35225 146 aa13.94□□□□□ -0.18
GTF3C1-213ENST00000571886 DOT1LQ8TEK3 1739 aa13.94□□□□□ -0.18
GTF3C1-213ENST00000571886 PARD3Q8TEW0 1356 aa13.94□□□□□ -0.18
GTF3C1-213ENST00000571886 NPC1L1Q9UHC9 1359 aa13.94□□□□□ -0.18
GTF3C1-213ENST00000571886 IGSF1Q8N6C5 1336 aa13.93□□□□□ -0.18
GTF3C1-213ENST00000571886 PKD1L3Q7Z443 1732 aa13.93□□□□□ -0.18
GTF3C1-213ENST00000571886 AEBP1Q8IUX7 1158 aa13.93□□□□□ -0.18
GTF3C1-213ENST00000571886 RGPD3A6NKT7 1758 aaPredicted RBP13.93□□□□□ -0.18
GTF3C1-213ENST00000571886 RGPD4Q7Z3J3 1758 aa13.93□□□□□ -0.18
GTF3C1-213ENST00000571886 TXNRD1Q16881 649 aa13.92□□□□□ -0.18
GTF3C1-213ENST00000571886 ANO8Q9HCE9 1232 aaPredicted RBP13.92□□□□□ -0.18
GTF3C1-213ENST00000571886 SYTL4Q96C24 671 aaPredicted RBP13.91□□□□□ -0.18
GTF3C1-213ENST00000571886 PCDH11XQ9BZA7 1347 aa13.9□□□□□ -0.18
GTF3C1-213ENST00000571886 PCDH11YQ9BZA8 1340 aa13.9□□□□□ -0.18
GTF3C1-213ENST00000571886 TOGARAM1Q9Y4F4 1720 aa13.9□□□□□ -0.18
GTF3C1-213ENST00000571886 KCNQ4P56696 695 aa13.89□□□□□ -0.19
GTF3C1-213ENST00000571886 SULT6B1Q6IMI4 303 aa13.89□□□□□ -0.19
GTF3C1-213ENST00000571886 LRRC4BQ9NT99 713 aa13.89□□□□□ -0.19
GTF3C1-213ENST00000571886 SPG7Q9UQ90 795 aa13.89□□□□□ -0.19
GTF3C1-213ENST00000571886 ITGB4P16144 1822 aa13.89□□□□□ -0.19
GTF3C1-213ENST00000571886 PHKG2P15735 406 aa13.88□□□□□ -0.19
GTF3C1-213ENST00000571886 NKX1-1Q15270 411 aaPredicted RBP13.88□□□□□ -0.19
GTF3C1-213ENST00000571886 NBPF14Q5TI25 921 aa13.88□□□□□ -0.19
GTF3C1-213ENST00000571886 PDGFDQ9GZP0 370 aaPredicted RBP13.88□□□□□ -0.19
GTF3C1-213ENST00000571886 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.88□□□□□ -0.192e-6■□□□□ 9.5
GTF3C1-213ENST00000571886 SRCAPQ6ZRS2 3230 aa13.88□□□□□ -0.19
GTF3C1-213ENST00000571886 HMOX1P09601 288 aa13.87□□□□□ -0.19
GTF3C1-213ENST00000571886 COL3A1P02461 1466 aaPredicted RBP13.87□□□□□ -0.19
GTF3C1-213ENST00000571886 DIAPH1O60610 1272 aaKnown RBP13.86□□□□□ -0.19
GTF3C1-213ENST00000571886 MPRIPQ6WCQ1 1025 aa13.86□□□□□ -0.19
GTF3C1-213ENST00000571886 IFNL2Q8IZJ0 200 aa13.86□□□□□ -0.19
GTF3C1-213ENST00000571886 LY75O60449 1722 aa13.85□□□□□ -0.19
GTF3C1-213ENST00000571886 PPP2R1AP30153 589 aa13.85□□□□□ -0.19
GTF3C1-213ENST00000571886 DDX10Q13206 875 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-213ENST00000571886 PLEKHO1Q53GL0 409 aaPredicted RBP13.85□□□□□ -0.19
GTF3C1-213ENST00000571886 PIGBQ92521 554 aa13.85□□□□□ -0.19
GTF3C1-213ENST00000571886 KDRP35968 1356 aa13.84□□□□□ -0.19
GTF3C1-213ENST00000571886 PAPPAQ13219 1627 aa13.84□□□□□ -0.19
GTF3C1-213ENST00000571886 ZNF827Q17R98 1081 aa13.84□□□□□ -0.19
GTF3C1-213ENST00000571886 SLC15A2Q16348 729 aa13.83□□□□□ -0.2
GTF3C1-213ENST00000571886 ZNF530Q6P9A1 599 aaPredicted RBP13.83□□□□□ -0.2
GTF3C1-213ENST00000571886 U2SURPO15042 1029 aaKnown RBP13.81□□□□□ -0.2
GTF3C1-213ENST00000571886 AMOTQ4VCS5 1084 aa13.81□□□□□ -0.2
GTF3C1-213ENST00000571886 AKT1S1Q96B36 256 aa13.81□□□□□ -0.2
GTF3C1-213ENST00000571886 STK32BQ9NY57 414 aa13.81□□□□□ -0.2
GTF3C1-213ENST00000571886 ASAP1Q9ULH1 1129 aa13.81□□□□□ -0.2
GTF3C1-213ENST00000571886 LRP5O75197 1615 aa13.81□□□□□ -0.2
GTF3C1-213ENST00000571886 CASZ1Q86V15 1759 aa13.81□□□□□ -0.2
GTF3C1-213ENST00000571886 KDM6AO15550 1401 aaPredicted RBP13.81□□□□□ -0.2
GTF3C1-213ENST00000571886 SLC27A3Q5K4L6 730 aa13.8□□□□□ -0.2
GTF3C1-213ENST00000571886 CCNL1Q9UK58 526 aaPredicted RBP13.8□□□□□ -0.2
GTF3C1-213ENST00000571886 PLEKHG2Q9H7P9 1386 aa13.8□□□□□ -0.2
GTF3C1-213ENST00000571886 MTHFSDQ2M296 383 aaKnown RBP13.79□□□□□ -0.2
GTF3C1-213ENST00000571886 ATG3Q9NT62 314 aa13.79□□□□□ -0.2
GTF3C1-213ENST00000571886 PALLDQ8WX93 1383 aa13.79□□□□□ -0.2
GTF3C1-213ENST00000571886 TUBGCP6Q96RT7 1819 aa13.78□□□□□ -0.2
GTF3C1-213ENST00000571886 ZEB1P37275 1124 aaPredicted RBP13.78□□□□□ -0.2
GTF3C1-213ENST00000571886 DCAF5Q96JK2 942 aa13.78□□□□□ -0.2
GTF3C1-213ENST00000571886 LGR6Q9HBX8 967 aa13.78□□□□□ -0.2
GTF3C1-213ENST00000571886 TMOD3Q9NYL9 352 aa13.78□□□□□ -0.2
GTF3C1-213ENST00000571886 VIRMAQ69YN4 1812 aaKnown RBP13.78□□□□□ -0.2
GTF3C1-213ENST00000571886 TAF1LQ8IZX4 1826 aa13.78□□□□□ -0.2
GTF3C1-213ENST00000571886 ERVV-2B6SEH9 535 aa13.77□□□□□ -0.21
GTF3C1-213ENST00000571886 ZBTB7AO95365 584 aa13.77□□□□□ -0.21
GTF3C1-213ENST00000571886 C1orf141Q5JVX7 400 aa13.77□□□□□ -0.21
GTF3C1-213ENST00000571886 SCN11AQ9UI33 1791 aa13.77□□□□□ -0.21
GTF3C1-213ENST00000571886 HSP90AB1P08238 724 aaKnown RBP13.76□□□□□ -0.21
GTF3C1-213ENST00000571886 AKAP4Q5JQC9 854 aa13.76□□□□□ -0.21
GTF3C1-213ENST00000571886 SMIM5Q71RC9 77 aa13.76□□□□□ -0.21
GTF3C1-213ENST00000571886 NFATC2IPQ8NCF5 419 aa13.76□□□□□ -0.21
GTF3C1-213ENST00000571886 SMARCC1Q92922 1105 aaPredicted RBP13.76□□□□□ -0.21
GTF3C1-213ENST00000571886 PHACTR3Q96KR7 559 aa13.76□□□□□ -0.21
GTF3C1-213ENST00000571886 CFAP53Q96M91 514 aa13.76□□□□□ -0.21
GTF3C1-213ENST00000571886 SLC4A9Q96Q91 983 aa13.76□□□□□ -0.21
GTF3C1-213ENST00000571886 RSPH6AQ9H0K4 717 aa13.76□□□□□ -0.21
GTF3C1-213ENST00000571886 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
GTF3C1-213ENST00000571886 PNPLA7Q6ZV29 1317 aa13.75□□□□□ -0.21
GTF3C1-213ENST00000571886 LOC102724428A0A0B4J2F2 783 aa13.75□□□□□ -0.21
GTF3C1-213ENST00000571886 RNMTO43148 476 aaKnown RBP13.75□□□□□ -0.21
GTF3C1-213ENST00000571886 SIK1P57059 783 aa13.75□□□□□ -0.21
GTF3C1-213ENST00000571886 CABP4P57796 275 aa13.75□□□□□ -0.21
GTF3C1-213ENST00000571886 AMIGO3Q86WK7 504 aa13.75□□□□□ -0.21
GTF3C1-213ENST00000571886 C5P01031 1676 aa13.75□□□□□ -0.21
GTF3C1-213ENST00000571886 U2AF1L5P0DN76 240 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms