RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 MSH6P52701 1360 aa21.5■■□□□ 1.03
SCARF1-205ENST00000571272 AATKQ6ZMQ8 1374 aa21.5■■□□□ 1.03
SCARF1-205ENST00000571272 ANP32BQ92688 251 aaKnown RBP21.5■■□□□ 1.03
SCARF1-205ENST00000571272 KIF24Q5T7B8 1368 aa21.49■■□□□ 1.03
SCARF1-205ENST00000571272 CPS1P31327 1500 aa21.49■■□□□ 1.03
SCARF1-205ENST00000571272 CASC1Q6TDU7 716 aa21.49■■□□□ 1.03
SCARF1-205ENST00000571272 LMBRD1Q9NUN5 540 aa21.49■■□□□ 1.03
SCARF1-205ENST00000571272 REREQ9P2R6 1566 aa21.48■■□□□ 1.03
SCARF1-205ENST00000571272 CHAMP1Q96JM3 812 aa21.48■■□□□ 1.03
SCARF1-205ENST00000571272 CCDC61Q9Y6R9 512 aa21.48■■□□□ 1.03
SCARF1-205ENST00000571272 MIS18AQ9NYP9 233 aa21.48■■□□□ 1.03
SCARF1-205ENST00000571272 RGS12O14924 1447 aa21.47■■□□□ 1.03
SCARF1-205ENST00000571272 RTL1A6NKG5 1358 aa21.47■■□□□ 1.03
SCARF1-205ENST00000571272 ST18O60284 1047 aa21.47■■□□□ 1.03
SCARF1-205ENST00000571272 CYP2E1P05181 493 aaPredicted RBP21.47■■□□□ 1.03
SCARF1-205ENST00000571272 EIF4A2Q14240 407 aaKnown RBP21.47■■□□□ 1.03
SCARF1-205ENST00000571272 PPP1R9BQ96SB3 815 aa21.47■■□□□ 1.03
SCARF1-205ENST00000571272 PRPF40AO75400 957 aaKnown RBP21.47■■□□□ 1.03
SCARF1-205ENST00000571272 MLECQ14165 292 aa21.47■■□□□ 1.03
SCARF1-205ENST00000571272 ZSCAN23Q3MJ62 389 aa21.46■■□□□ 1.03
SCARF1-205ENST00000571272 CHL1O00533 1208 aa21.46■■□□□ 1.03
SCARF1-205ENST00000571272 SLC4A2P04920 1241 aa21.46■■□□□ 1.03
SCARF1-205ENST00000571272 HSP90AA2PQ14568 343 aaPredicted RBP21.46■■□□□ 1.03
SCARF1-205ENST00000571272 FOXD4L5Q5VV16 416 aaPredicted RBP21.46■■□□□ 1.03
SCARF1-205ENST00000571272 FOXD4L4Q8WXT5 416 aaPredicted RBP21.46■■□□□ 1.03
SCARF1-205ENST00000571272 SLC4A10Q6U841 1118 aa21.46■■□□□ 1.03
SCARF1-205ENST00000571272 DLC1Q96QB1 1528 aa21.45■■□□□ 1.02
SCARF1-205ENST00000571272 SOX12O15370 315 aa21.45■■□□□ 1.02
SCARF1-205ENST00000571272 METP08581 1390 aa21.45■■□□□ 1.02
SCARF1-205ENST00000571272 RBM27Q9P2N5 1060 aaKnown RBP21.45■■□□□ 1.02
SCARF1-205ENST00000571272 IBTKQ9P2D0 1353 aaPredicted RBP21.45■■□□□ 1.02
SCARF1-205ENST00000571272 A2ML1A8K2U0 1454 aa21.44■■□□□ 1.02
SCARF1-205ENST00000571272 F6X3S4 739 aa21.44■■□□□ 1.02
SCARF1-205ENST00000571272 ZNF445P59923 1031 aa21.44■■□□□ 1.02
SCARF1-205ENST00000571272 NUTM2FA1L443 756 aa21.43■■□□□ 1.02
SCARF1-205ENST00000571272 REC8O95072 547 aa21.43■■□□□ 1.02
SCARF1-205ENST00000571272 ZDHHC9Q9Y397 364 aa21.43■■□□□ 1.02
SCARF1-205ENST00000571272 TSHZ3Q63HK5 1081 aa21.43■■□□□ 1.02
SCARF1-205ENST00000571272 ZSCAN30Q86W11 494 aa21.43■■□□□ 1.02
SCARF1-205ENST00000571272 CWC22Q9HCG8 908 aaKnown RBP21.43■■□□□ 1.02
SCARF1-205ENST00000571272 HAP1P54257 671 aaPredicted RBP21.42■■□□□ 1.02
SCARF1-205ENST00000571272 ERC2O15083 957 aa21.42■■□□□ 1.02
SCARF1-205ENST00000571272 RBSNQ9H1K0 784 aa21.42■■□□□ 1.02
SCARF1-205ENST00000571272 PRIM1P49642 420 aaKnown RBP21.42■■□□□ 1.02
SCARF1-205ENST00000571272 HSP90AB2PQ58FF8 381 aa21.42■■□□□ 1.02
SCARF1-205ENST00000571272 G2E3Q7L622 706 aa21.42■■□□□ 1.02
SCARF1-205ENST00000571272 GPT2Q8TD30 523 aa21.41■■□□□ 1.02
SCARF1-205ENST00000571272 PTPRCP08575 1304 aa21.41■■□□□ 1.02
SCARF1-205ENST00000571272 RIMBP3CA6NJZ7 1639 aa21.4■■□□□ 1.02
SCARF1-205ENST00000571272 RIMBP3BA6NNM3 1639 aa21.4■■□□□ 1.02
SCARF1-205ENST00000571272 RIMBP3Q9UFD9 1639 aa21.4■■□□□ 1.02
SCARF1-205ENST00000571272 MSNP26038 577 aaKnown RBP21.4■■□□□ 1.02
SCARF1-205ENST00000571272 PRR36Q9H6K5 1346 aa21.4■■□□□ 1.02
SCARF1-205ENST00000571272 NEK4P51957 841 aa21.39■■□□□ 1.02
SCARF1-205ENST00000571272 PDE1AP54750 535 aa21.39■■□□□ 1.02
SCARF1-205ENST00000571272 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.39■■□□□ 1.02
SCARF1-205ENST00000571272 EXOC6BQ9Y2D4 811 aa21.39■■□□□ 1.02
SCARF1-205ENST00000571272 FOXO3O43524 673 aa21.39■■□□□ 1.01
SCARF1-205ENST00000571272 HMMRO75330 724 aa21.38■■□□□ 1.01
SCARF1-205ENST00000571272 KIAA1211Q6ZU35 1233 aa21.38■■□□□ 1.01
SCARF1-205ENST00000571272 RRP9O43818 475 aaKnown RBP21.38■■□□□ 1.01
SCARF1-205ENST00000571272 KIAA0232Q92628 1395 aa21.37■■□□□ 1.01
SCARF1-205ENST00000571272 NOL8Q76FK4 1167 aaKnown RBP21.37■■□□□ 1.01
SCARF1-205ENST00000571272 NSFL1CQ9UNZ2 370 aaKnown RBP21.37■■□□□ 1.01
SCARF1-205ENST00000571272 SETD1AO15047 1707 aaKnown RBP21.36■■□□□ 1.01
SCARF1-205ENST00000571272 TMX3Q96JJ7 454 aa21.35■■□□□ 1.01
SCARF1-205ENST00000571272 TMEM63CQ9P1W3 806 aa21.35■■□□□ 1.01
SCARF1-205ENST00000571272 TSPYL4Q9UJ04 414 aa21.35■■□□□ 1.01
SCARF1-205ENST00000571272 TTC21BQ7Z4L5 1316 aa21.35■■□□□ 1.01
SCARF1-205ENST00000571272 SYCE3A1L190 88 aa21.34■■□□□ 1.01
SCARF1-205ENST00000571272 GLIPR1L2Q4G1C9 344 aa21.33■■□□□ 1.01
SCARF1-205ENST00000571272 OSBPL3Q9H4L5 887 aa21.33■■□□□ 1
SCARF1-205ENST00000571272 TPM2P07951 284 aa21.32■■□□□ 1
SCARF1-205ENST00000571272 PALD1Q9ULE6 856 aa21.32■■□□□ 1
SCARF1-205ENST00000571272 ACEP12821 1306 aa21.32■■□□□ 1
SCARF1-205ENST00000571272 RTF1Q92541 710 aaKnown RBP21.32■■□□□ 1
SCARF1-205ENST00000571272 NECTIN2Q92692 538 aa21.32■■□□□ 1
SCARF1-205ENST00000571272 RILPL2Q969X0 211 aa21.32■■□□□ 1
SCARF1-205ENST00000571272 MON2Q7Z3U7 1717 aa21.32■■□□□ 1
SCARF1-205ENST00000571272 CRB1P82279 1406 aa21.32■■□□□ 1
SCARF1-205ENST00000571272 GNAI2P04899 355 aa21.31■■□□□ 1
SCARF1-205ENST00000571272 CCT4P50991 539 aaKnown RBP21.31■■□□□ 1
SCARF1-205ENST00000571272 MTHFSDQ2M296 383 aaKnown RBP21.31■■□□□ 1
SCARF1-205ENST00000571272 FOXD4L6Q3SYB3 417 aaPredicted RBP21.31■■□□□ 1
SCARF1-205ENST00000571272 FOXD4L3Q6VB84 417 aaPredicted RBP21.31■■□□□ 1
SCARF1-205ENST00000571272 TRIM6-TRIM34B2RNG4 842 aa21.31■■□□□ 1
SCARF1-205ENST00000571272 OFD1O75665 1012 aa21.31■■□□□ 1
SCARF1-205ENST00000571272 ESYT1Q9BSJ8 1104 aa21.3■■□□□ 1
SCARF1-205ENST00000571272 ANO2Q9NQ90 1003 aa21.3■■□□□ 1
SCARF1-205ENST00000571272 C3P01024 1663 aa21.3■■□□□ 1
SCARF1-205ENST00000571272 RNF214Q8ND24 703 aa21.3■■□□□ 1
SCARF1-205ENST00000571272 FAM69CQ0P6D2 419 aa21.3■■□□□ 1
SCARF1-205ENST00000571272 MAP3K19Q56UN5 1328 aa21.29■■□□□ 1
SCARF1-205ENST00000571272 NRXN3Q9Y4C0 1643 aa21.29■■□□□ 1
SCARF1-205ENST00000571272 PNMA6EA0A0J9YXQ4 647 aa21.29■■□□□ 1
SCARF1-205ENST00000571272 LRSAM1Q6UWE0 723 aa21.29■■□□□ 1
SCARF1-205ENST00000571272 PDLIM2Q96JY6 352 aa21.29■■□□□ 1
SCARF1-205ENST00000571272 LRRCC1Q9C099 1032 aa21.29■■□□□ 1
SCARF1-205ENST00000571272 MX1P20591 662 aa21.28■■□□□ 1
SCARF1-205ENST00000571272 VSIG10Q8N0Z9 540 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms