RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 NLGN2Q8NFZ4 835 aa29.75■■■□□ 2.35
UBFD1-210ENST00000571064 LTN1O94822 1766 aa29.75■■■□□ 2.35
UBFD1-210ENST00000571064 WASHC2AQ641Q2 1341 aa29.74■■■□□ 2.35
UBFD1-210ENST00000571064 SLC27A3Q5K4L6 730 aa29.73■■■□□ 2.35
UBFD1-210ENST00000571064 DDX54Q8TDD1 881 aaKnown RBP29.73■■■□□ 2.35
UBFD1-210ENST00000571064 GOLGB1Q14789 3259 aaKnown RBP29.73■■■□□ 2.35
UBFD1-210ENST00000571064 IFFO2Q5TF58 517 aa29.72■■■□□ 2.35
UBFD1-210ENST00000571064 TFCP2L1Q9NZI6 479 aa29.72■■■□□ 2.35
UBFD1-210ENST00000571064 QSER1Q2KHR3 1735 aa29.71■■■□□ 2.35
UBFD1-210ENST00000571064 COL24A1Q17RW2 1714 aa29.71■■■□□ 2.35
UBFD1-210ENST00000571064 USP54Q70EL1 1684 aa29.7■■■□□ 2.35
UBFD1-210ENST00000571064 A0A1W2PP64 1363 aa29.69■■■□□ 2.34
UBFD1-210ENST00000571064 SHANK3Q9BYB0 1731 aa29.69■■■□□ 2.34
UBFD1-210ENST00000571064 TUBGCP6Q96RT7 1819 aa29.68■■■□□ 2.34
UBFD1-210ENST00000571064 SYTL4Q96C24 671 aaPredicted RBP29.67■■■□□ 2.34
UBFD1-210ENST00000571064 YBX3P16989 372 aaKnown RBP eCLIP29.66■■■□□ 2.34
UBFD1-210ENST00000571064 ANKRD36BQ8N2N9 1353 aa29.65■■■□□ 2.34
UBFD1-210ENST00000571064 PRIM1P49642 420 aaKnown RBP29.65■■■□□ 2.34
UBFD1-210ENST00000571064 HDGFL2Q7Z4V5 671 aaPredicted RBP29.65■■■□□ 2.34
UBFD1-210ENST00000571064 TERF2IPQ9NYB0 399 aa29.65■■■□□ 2.34
UBFD1-210ENST00000571064 LTV1Q96GA3 475 aaPredicted RBP29.64■■■□□ 2.34
UBFD1-210ENST00000571064 IP6K1Q92551 441 aa29.61■■■□□ 2.33
UBFD1-210ENST00000571064 CARD14Q9BXL6 1004 aa29.61■■■□□ 2.33
UBFD1-210ENST00000571064 NSD2O96028 1365 aa29.6■■■□□ 2.33
UBFD1-210ENST00000571064 CEP350Q5VT06 3117 aa29.6■■■□□ 2.33
UBFD1-210ENST00000571064 GRIN3BO60391 1043 aa29.59■■■□□ 2.33
UBFD1-210ENST00000571064 MSH5O43196 834 aa29.58■■■□□ 2.33
UBFD1-210ENST00000571064 EDC4Q6P2E9 1401 aaKnown RBP29.58■■■□□ 2.33
UBFD1-210ENST00000571064 PANK3Q9H999 370 aa29.58■■■□□ 2.33
UBFD1-210ENST00000571064 LY75O60449 1722 aa29.57■■■□□ 2.32
UBFD1-210ENST00000571064 DOT1LQ8TEK3 1739 aa29.57■■■□□ 2.32
UBFD1-210ENST00000571064 COL23A1Q86Y22 540 aaPredicted RBP29.57■■■□□ 2.32
UBFD1-210ENST00000571064 CCNL1Q9UK58 526 aaPredicted RBP29.57■■■□□ 2.32
UBFD1-210ENST00000571064 MSL1Q68DK7 614 aa29.54■■■□□ 2.32
UBFD1-210ENST00000571064 FAM208AQ9UK61 1670 aaKnown RBP29.53■■■□□ 2.32
UBFD1-210ENST00000571064 ATP10DQ9P241 1426 aa29.53■■■□□ 2.32
UBFD1-210ENST00000571064 ZCRB1Q8TBF4 217 aaKnown RBP29.52■■■□□ 2.32
UBFD1-210ENST00000571064 NSD3Q9BZ95 1437 aa29.52■■■□□ 2.32
UBFD1-210ENST00000571064 ZNF316A6NFI3 1004 aaPredicted RBP29.5■■■□□ 2.31
UBFD1-210ENST00000571064 FBLN1P23142 703 aa29.49■■■□□ 2.31
UBFD1-210ENST00000571064 MEGF6O75095 1541 aa29.49■■■□□ 2.31
UBFD1-210ENST00000571064 MAP3K19Q56UN5 1328 aa29.48■■■□□ 2.31
UBFD1-210ENST00000571064 HOXC9P31274 260 aa29.48■■■□□ 2.31
UBFD1-210ENST00000571064 RGPD2P0DJD1 1756 aa29.47■■■□□ 2.31
UBFD1-210ENST00000571064 AMPHP49418 695 aa29.45■■■□□ 2.31
UBFD1-210ENST00000571064 GPBP1L1Q9HC44 474 aaPredicted RBP29.45■■■□□ 2.31
UBFD1-210ENST00000571064 FYB1O15117 783 aa29.44■■■□□ 2.3
UBFD1-210ENST00000571064 PER1O15534 1290 aaPredicted RBP29.44■■■□□ 2.3
UBFD1-210ENST00000571064 KIF20BQ96Q89 1820 aa29.43■■■□□ 2.3
UBFD1-210ENST00000571064 ZNF526Q8TF50 670 aaPredicted RBP29.43■■■□□ 2.3
UBFD1-210ENST00000571064 CD2APQ9Y5K6 639 aa29.43■■■□□ 2.3
UBFD1-210ENST00000571064 COG3Q96JB2 828 aa29.42■■■□□ 2.3
UBFD1-210ENST00000571064 USHBP1Q8N6Y0 703 aa29.4■■■□□ 2.3
UBFD1-210ENST00000571064 GGNBP2Q9H3C7 697 aa29.4■■■□□ 2.3
UBFD1-210ENST00000571064 DDX10Q13206 875 aaKnown RBP29.39■■■□□ 2.3
UBFD1-210ENST00000571064 NBPF6Q5VWK0 638 aa29.39■■■□□ 2.3
UBFD1-210ENST00000571064 NBPF4Q96M43 638 aa29.39■■■□□ 2.3
UBFD1-210ENST00000571064 ADCY9O60503 1353 aa29.39■■■□□ 2.29
UBFD1-210ENST00000571064 C5P01031 1676 aa29.38■■■□□ 2.29
UBFD1-210ENST00000571064 HSPA6P17066 643 aa29.38■■■□□ 2.29
UBFD1-210ENST00000571064 CGNL1Q0VF96 1302 aa29.38■■■□□ 2.29
UBFD1-210ENST00000571064 AMER1Q5JTC6 1135 aaPredicted RBP29.36■■■□□ 2.29
UBFD1-210ENST00000571064 WWC3Q9ULE0 1092 aa29.36■■■□□ 2.29
UBFD1-210ENST00000571064 KNSTRNQ9Y448 316 aa29.36■■■□□ 2.29
UBFD1-210ENST00000571064 RRS1Q15050 365 aaKnown RBP29.34■■■□□ 2.29
UBFD1-210ENST00000571064 FLAD1Q8NFF5 587 aa29.34■■■□□ 2.29
UBFD1-210ENST00000571064 RAPGEF4Q8WZA2 1011 aa29.33■■■□□ 2.29
UBFD1-210ENST00000571064 PALLDQ8WX93 1383 aa29.33■■■□□ 2.29
UBFD1-210ENST00000571064 ANKRD26Q9UPS8 1709 aa29.32■■■□□ 2.28
UBFD1-210ENST00000571064 AMIGO3Q86WK7 504 aa29.32■■■□□ 2.28
UBFD1-210ENST00000571064 MPRIPQ6WCQ1 1025 aa29.31■■■□□ 2.28
UBFD1-210ENST00000571064 TAF1LQ8IZX4 1826 aa29.31■■■□□ 2.28
UBFD1-210ENST00000571064 RTL1A6NKG5 1358 aa29.3■■■□□ 2.28
UBFD1-210ENST00000571064 IGSF1Q8N6C5 1336 aa29.3■■■□□ 2.28
UBFD1-210ENST00000571064 SMIM5Q71RC9 77 aa29.3■■■□□ 2.28
UBFD1-210ENST00000571064 TATP17735 454 aaPredicted RBP29.29■■■□□ 2.28
UBFD1-210ENST00000571064 PCDH11XQ9BZA7 1347 aa29.27■■■□□ 2.28
UBFD1-210ENST00000571064 PCDH11YQ9BZA8 1340 aa29.27■■■□□ 2.28
UBFD1-210ENST00000571064 PHF14O94880 888 aa29.27■■■□□ 2.28
UBFD1-210ENST00000571064 AK7Q96M32 723 aa29.27■■■□□ 2.28
UBFD1-210ENST00000571064 C4BP0C0L5 1744 aa29.26■■■□□ 2.27
UBFD1-210ENST00000571064 NPC1L1Q9UHC9 1359 aa29.26■■■□□ 2.27
UBFD1-210ENST00000571064 HMGB2P26583 209 aaKnown RBP29.25■■■□□ 2.27
UBFD1-210ENST00000571064 TOGARAM1Q9Y4F4 1720 aa29.25■■■□□ 2.27
UBFD1-210ENST00000571064 CC2D1BQ5T0F9 858 aaKnown RBP29.24■■■□□ 2.27
UBFD1-210ENST00000571064 SMG6Q86US8 1419 aaKnown RBP29.24■■■□□ 2.27
UBFD1-210ENST00000571064 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.23■■■□□ 2.27
UBFD1-210ENST00000571064 KIF3CO14782 793 aa29.23■■■□□ 2.27
UBFD1-210ENST00000571064 CYP27B1O15528 508 aa29.23■■■□□ 2.27
UBFD1-210ENST00000571064 HSP90AB2PQ58FF8 381 aa29.22■■■□□ 2.27
UBFD1-210ENST00000571064 SMARCC1Q92922 1105 aaPredicted RBP29.21■■■□□ 2.27
UBFD1-210ENST00000571064 UBR3Q6ZT12 1888 aa29.21■■■□□ 2.27
UBFD1-210ENST00000571064 CNGB1Q14028 1251 aaPredicted RBP29.2■■■□□ 2.26
UBFD1-210ENST00000571064 MORC1Q86VD1 984 aa29.19■■■□□ 2.26
UBFD1-210ENST00000571064 ITGB4P16144 1822 aa29.18■■■□□ 2.26
UBFD1-210ENST00000571064 INSRP06213 1382 aa29.18■■■□□ 2.26
UBFD1-210ENST00000571064 PIGBQ92521 554 aa29.18■■■□□ 2.26
UBFD1-210ENST00000571064 TNNT2P45379 298 aaPredicted RBP29.17■■■□□ 2.26
UBFD1-210ENST00000571064 LINC00116Q8NCU8 138 aa29.16■■■□□ 2.26
UBFD1-210ENST00000571064 SSFA2P28290 1259 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms