RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 COL3A1P02461 1466 aaPredicted RBP25.28■■□□□ 1.64
SPNS2-203ENST00000570979 AXIN2Q9Y2T1 843 aa25.28■■□□□ 1.64
SPNS2-203ENST00000570979 PLIN1O60240 522 aa25.27■■□□□ 1.64
SPNS2-203ENST00000570979 FCHSD2O94868 740 aa25.26■■□□□ 1.63
SPNS2-203ENST00000570979 ARHGEF25Q86VW2 580 aa25.26■■□□□ 1.63
SPNS2-203ENST00000570979 NME9Q86XW9 330 aa25.26■■□□□ 1.63
SPNS2-203ENST00000570979 U2SURPO15042 1029 aaKnown RBP25.26■■□□□ 1.63
SPNS2-203ENST00000570979 BARGINQ6ZT62 677 aa25.26■■□□□ 1.63
SPNS2-203ENST00000570979 NFAT5O94916 1531 aa25.25■■□□□ 1.63
SPNS2-203ENST00000570979 IL16Q14005 1332 aa25.25■■□□□ 1.63
SPNS2-203ENST00000570979 MS4A1P11836 297 aa25.25■■□□□ 1.63
SPNS2-203ENST00000570979 KCNH5Q8NCM2 988 aa25.23■■□□□ 1.63
SPNS2-203ENST00000570979 SPINK5Q9NQ38 1064 aaPredicted RBP25.23■■□□□ 1.63
SPNS2-203ENST00000570979 RGPD5Q99666 1765 aa25.23■■□□□ 1.63
SPNS2-203ENST00000570979 USP31Q70CQ4 1352 aa25.23■■□□□ 1.63
SPNS2-203ENST00000570979 NEUROD2Q15784 382 aa25.22■■□□□ 1.63
SPNS2-203ENST00000570979 COG3Q96JB2 828 aa25.22■■□□□ 1.63
SPNS2-203ENST00000570979 CRB1P82279 1406 aa25.21■■□□□ 1.63
SPNS2-203ENST00000570979 SF3B2Q13435 895 aaKnown RBP25.21■■□□□ 1.63
SPNS2-203ENST00000570979 CENPQQ7L2Z9 268 aaPredicted RBP25.21■■□□□ 1.63
SPNS2-203ENST00000570979 PLEKHF1Q96S99 279 aa25.21■■□□□ 1.63
SPNS2-203ENST00000570979 USP54Q70EL1 1684 aa25.21■■□□□ 1.63
SPNS2-203ENST00000570979 PRKCSHP14314 528 aaPredicted RBP25.19■■□□□ 1.62
SPNS2-203ENST00000570979 TMPOP42166 694 aaKnown RBP25.19■■□□□ 1.62
SPNS2-203ENST00000570979 POLKQ9UBT6 870 aa25.18■■□□□ 1.62
SPNS2-203ENST00000570979 THRAP3Q9Y2W1 955 aaKnown RBP25.18■■□□□ 1.62
SPNS2-203ENST00000570979 CANXP27824 592 aaKnown RBP25.18■■□□□ 1.62
SPNS2-203ENST00000570979 CALD1Q05682 793 aaKnown RBP25.18■■□□□ 1.62
SPNS2-203ENST00000570979 RRP7AQ9Y3A4 280 aaKnown RBP25.18■■□□□ 1.62
SPNS2-203ENST00000570979 TOM1L2Q6ZVM7 507 aa25.16■■□□□ 1.62
SPNS2-203ENST00000570979 WDR17Q8IZU2 1322 aa25.16■■□□□ 1.62
SPNS2-203ENST00000570979 RGPD1P0DJD0 1748 aa25.14■■□□□ 1.62
SPNS2-203ENST00000570979 PARP4Q9UKK3 1724 aaKnown RBP25.14■■□□□ 1.62
SPNS2-203ENST00000570979 OVOS2A0A0J9YW53 1432 aa25.14■■□□□ 1.61
SPNS2-203ENST00000570979 OVOS2Q6IE36 1432 aa25.14■■□□□ 1.61
SPNS2-203ENST00000570979 TNS1Q9HBL0 1735 aaKnown RBP25.13■■□□□ 1.61
SPNS2-203ENST00000570979 FAM196AQ6ZSG2 479 aa25.13■■□□□ 1.61
SPNS2-203ENST00000570979 MAP2P11137 1827 aaKnown RBP25.13■■□□□ 1.61
SPNS2-203ENST00000570979 TRIM37O94972 964 aa25.13■■□□□ 1.61
SPNS2-203ENST00000570979 BAG6P46379 1132 aa25.13■■□□□ 1.61
SPNS2-203ENST00000570979 RARSP54136 660 aaKnown RBP25.13■■□□□ 1.61
SPNS2-203ENST00000570979 C20orf194Q5TEA3 1177 aa25.13■■□□□ 1.61
SPNS2-203ENST00000570979 BCAR3O75815 825 aa25.12■■□□□ 1.61
SPNS2-203ENST00000570979 EN1Q05925 392 aaPredicted RBP25.12■■□□□ 1.61
SPNS2-203ENST00000570979 LTN1O94822 1766 aa25.11■■□□□ 1.61
SPNS2-203ENST00000570979 CSB-PGBD3P0DP91 1061 aa25.1■■□□□ 1.61
SPNS2-203ENST00000570979 RIPK4P57078 832 aa25.1■■□□□ 1.61
SPNS2-203ENST00000570979 ZNF428Q96B54 188 aa25.1■■□□□ 1.61
SPNS2-203ENST00000570979 WNK3Q9BYP7 1800 aa25.09■■□□□ 1.61
SPNS2-203ENST00000570979 LRRC37A3O60309 1634 aa25.09■■□□□ 1.61
SPNS2-203ENST00000570979 ABCC6O95255 1503 aa25.09■■□□□ 1.61
SPNS2-203ENST00000570979 LMOD3Q0VAK6 560 aa25.09■■□□□ 1.61
SPNS2-203ENST00000570979 SRCAPQ6ZRS2 3230 aa25.09■■□□□ 1.61
SPNS2-203ENST00000570979 KDM2BQ8NHM5 1336 aa25.08■■□□□ 1.61
SPNS2-203ENST00000570979 CARD10Q9BWT7 1032 aa25.08■■□□□ 1.61
SPNS2-203ENST00000570979 PPM1GO15355 546 aaPredicted RBP25.08■■□□□ 1.6
SPNS2-203ENST00000570979 RSPH6AQ9H0K4 717 aa25.07■■□□□ 1.6
SPNS2-203ENST00000570979 TRIM35Q9UPQ4 493 aa25.07■■□□□ 1.6
SPNS2-203ENST00000570979 DISP2A7MBM2 1401 aa25.07■■□□□ 1.6
SPNS2-203ENST00000570979 FBLN1P23142 703 aa25.06■■□□□ 1.6
SPNS2-203ENST00000570979 ERBB3P21860 1342 aa25.05■■□□□ 1.6
SPNS2-203ENST00000570979 IL13P35225 146 aa25.05■■□□□ 1.6
SPNS2-203ENST00000570979 PEAK1Q9H792 1746 aa25.04■■□□□ 1.6
SPNS2-203ENST00000570979 ANP32AP39687 249 aaKnown RBP25.04■■□□□ 1.6
SPNS2-203ENST00000570979 EZH2Q15910 746 aaKnown RBP25.04■■□□□ 1.6
SPNS2-203ENST00000570979 NFE2L2Q16236 605 aa25.04■■□□□ 1.6
SPNS2-203ENST00000570979 DDB1Q16531 1140 aa25.04■■□□□ 1.6
SPNS2-203ENST00000570979 PRKAR2BP31323 418 aa25.03■■□□□ 1.6
SPNS2-203ENST00000570979 CAMKK2Q96RR4 588 aa25.03■■□□□ 1.6
SPNS2-203ENST00000570979 APBA3O96018 575 aa25.02■■□□□ 1.6
SPNS2-203ENST00000570979 ZKSCAN2Q63HK3 967 aa25.01■■□□□ 1.59
SPNS2-203ENST00000570979 MARCH10Q8NA82 808 aaPredicted RBP25.01■■□□□ 1.59
SPNS2-203ENST00000570979 ANKRD24Q8TF21 1146 aa25.01■■□□□ 1.59
SPNS2-203ENST00000570979 CLUAP1Q96AJ1 413 aa25.01■■□□□ 1.59
SPNS2-203ENST00000570979 NLRP2Q9NX02 1062 aa25■■□□□ 1.59
SPNS2-203ENST00000570979 IPO8O15397 1037 aaKnown RBP25■■□□□ 1.59
SPNS2-203ENST00000570979 FRAT1Q92837 279 aaPredicted RBP25■■□□□ 1.59
SPNS2-203ENST00000570979 EMILIN1Q9Y6C2 1016 aa25■■□□□ 1.59
SPNS2-203ENST00000570979 OVOS2A0A0G2JMS6 1433 aa24.99■■□□□ 1.59
SPNS2-203ENST00000570979 IP6K1Q92551 441 aa24.99■■□□□ 1.59
SPNS2-203ENST00000570979 CDCA7Q9BWT1 371 aaPredicted RBP24.99■■□□□ 1.59
SPNS2-203ENST00000570979 MAP3K19Q56UN5 1328 aa24.99■■□□□ 1.59
SPNS2-203ENST00000570979 PSDA5PKW4 1024 aaPredicted RBP24.98■■□□□ 1.59
SPNS2-203ENST00000570979 ALDH1L2Q3SY69 923 aa24.98■■□□□ 1.59
SPNS2-203ENST00000570979 SBF2Q86WG5 1849 aa24.98■■□□□ 1.59
SPNS2-203ENST00000570979 GNAI1P63096 354 aa24.98■■□□□ 1.59
SPNS2-203ENST00000570979 PTF1AQ7RTS3 328 aa24.98■■□□□ 1.59
SPNS2-203ENST00000570979 PDE4AP27815 886 aa24.97■■□□□ 1.59
SPNS2-203ENST00000570979 KIF16BQ96L93 1317 aa24.96■■□□□ 1.59
SPNS2-203ENST00000570979 EXOSC9Q06265 439 aaKnown RBP24.95■■□□□ 1.59
SPNS2-203ENST00000570979 LTV1Q96GA3 475 aaPredicted RBP24.95■■□□□ 1.59
SPNS2-203ENST00000570979 BACH2Q9BYV9 841 aa24.95■■□□□ 1.59
SPNS2-203ENST00000570979 CHMP4BQ9H444 224 aaKnown RBP24.95■■□□□ 1.58
SPNS2-203ENST00000570979 EXOC5O00471 708 aa24.94■■□□□ 1.58
SPNS2-203ENST00000570979 MSH5O43196 834 aa24.94■■□□□ 1.58
SPNS2-203ENST00000570979 HOXC9P31274 260 aa24.94■■□□□ 1.58
SPNS2-203ENST00000570979 RRS1Q15050 365 aaKnown RBP24.94■■□□□ 1.58
SPNS2-203ENST00000570979 IFT57Q9NWB7 429 aa24.94■■□□□ 1.58
SPNS2-203ENST00000570979 BRPF1P55201 1214 aaPredicted RBP24.93■■□□□ 1.58
SPNS2-203ENST00000570979 FTSJ3Q8IY81 847 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms