RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 APBA3O96018 575 aa18.32■□□□□ 0.52
RPAIN-207ENST00000570883 EIF4A2Q14240 407 aaKnown RBP18.32■□□□□ 0.52
RPAIN-207ENST00000570883 EZH2Q15910 746 aaKnown RBP18.32■□□□□ 0.52
RPAIN-207ENST00000570883 CAMKK2Q96RR4 588 aa18.32■□□□□ 0.52
RPAIN-207ENST00000570883 SRCAPQ6ZRS2 3230 aa18.32■□□□□ 0.52
RPAIN-207ENST00000570883 CC2D1BQ5T0F9 858 aaKnown RBP18.31■□□□□ 0.52
RPAIN-207ENST00000570883 EYA1Q99502 592 aa18.31■□□□□ 0.52
RPAIN-207ENST00000570883 PARD3Q8TEW0 1356 aa18.3■□□□□ 0.52
RPAIN-207ENST00000570883 TOGARAM1Q9Y4F4 1720 aa18.3■□□□□ 0.52
RPAIN-207ENST00000570883 BCL11BQ9C0K0 894 aaPredicted RBP18.3■□□□□ 0.52
RPAIN-207ENST00000570883 RAPGEF4Q8WZA2 1011 aa18.29■□□□□ 0.52
RPAIN-207ENST00000570883 ITGB4P16144 1822 aa18.28■□□□□ 0.52
RPAIN-207ENST00000570883 KCNQ2O43526 872 aa18.28■□□□□ 0.52
RPAIN-207ENST00000570883 ZCRB1Q8TBF4 217 aaKnown RBP18.28■□□□□ 0.52
RPAIN-207ENST00000570883 DDX54Q8TDD1 881 aaKnown RBP18.28■□□□□ 0.52
RPAIN-207ENST00000570883 IGSF1Q8N6C5 1336 aa18.27■□□□□ 0.52
RPAIN-207ENST00000570883 TATP17735 454 aaPredicted RBP18.27■□□□□ 0.52
RPAIN-207ENST00000570883 ACSBG1Q96GR2 724 aa18.27■□□□□ 0.52
RPAIN-207ENST00000570883 CNGB1Q14028 1251 aaPredicted RBP18.25■□□□□ 0.51
RPAIN-207ENST00000570883 COL3A1P02461 1466 aaPredicted RBP18.25■□□□□ 0.51
RPAIN-207ENST00000570883 PLSCR1O15162 318 aa18.24■□□□□ 0.51
RPAIN-207ENST00000570883 MTHFSP49914 203 aa18.24■□□□□ 0.51
RPAIN-207ENST00000570883 PCDH11XQ9BZA7 1347 aa18.23■□□□□ 0.51
RPAIN-207ENST00000570883 PCDH11YQ9BZA8 1340 aa18.23■□□□□ 0.51
RPAIN-207ENST00000570883 LY75O60449 1722 aa18.23■□□□□ 0.51
RPAIN-207ENST00000570883 CYP27B1O15528 508 aa18.23■□□□□ 0.51
RPAIN-207ENST00000570883 VIRMAQ69YN4 1812 aaKnown RBP18.21■□□□□ 0.51
RPAIN-207ENST00000570883 PAPPAQ13219 1627 aa18.21■□□□□ 0.51
RPAIN-207ENST00000570883 IL13P35225 146 aa18.21■□□□□ 0.51
RPAIN-207ENST00000570883 AEBP1Q8IUX7 1158 aa18.21■□□□□ 0.51
RPAIN-207ENST00000570883 KDRP35968 1356 aa18.2■□□□□ 0.5
RPAIN-207ENST00000570883 PLEKHG2Q9H7P9 1386 aa18.2■□□□□ 0.5
RPAIN-207ENST00000570883 PSDA5PKW4 1024 aaPredicted RBP18.2■□□□□ 0.5
RPAIN-207ENST00000570883 PROM2Q8N271 834 aa18.2■□□□□ 0.5
RPAIN-207ENST00000570883 PRIM1P49642 420 aaKnown RBP18.18■□□□□ 0.5
RPAIN-207ENST00000570883 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.18■□□□□ 0.52e-8■□□□□ 9.4
RPAIN-207ENST00000570883 R3HDM1Q15032 1099 aaKnown RBP18.17■□□□□ 0.5
RPAIN-207ENST00000570883 SPG7Q9UQ90 795 aa18.17■□□□□ 0.5
RPAIN-207ENST00000570883 LRP5O75197 1615 aa18.16■□□□□ 0.5
RPAIN-207ENST00000570883 TXNRD1Q16881 649 aa18.16■□□□□ 0.5
RPAIN-207ENST00000570883 SULT6B1Q6IMI4 303 aa18.16■□□□□ 0.5
RPAIN-207ENST00000570883 SYTL4Q96C24 671 aaPredicted RBP18.16■□□□□ 0.5
RPAIN-207ENST00000570883 ANO8Q9HCE9 1232 aaPredicted RBP18.16■□□□□ 0.5
RPAIN-207ENST00000570883 CASZ1Q86V15 1759 aa18.16■□□□□ 0.5
RPAIN-207ENST00000570883 TUBGCP6Q96RT7 1819 aa18.16■□□□□ 0.5
RPAIN-207ENST00000570883 SCN11AQ9UI33 1791 aa18.15■□□□□ 0.5
RPAIN-207ENST00000570883 TAF1LQ8IZX4 1826 aa18.15■□□□□ 0.5
RPAIN-207ENST00000570883 NKX1-1Q15270 411 aaPredicted RBP18.15■□□□□ 0.5
RPAIN-207ENST00000570883 PHKG2P15735 406 aa18.14■□□□□ 0.49
RPAIN-207ENST00000570883 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
RPAIN-207ENST00000570883 DIAPH1O60610 1272 aaKnown RBP18.13■□□□□ 0.49
RPAIN-207ENST00000570883 PPP2R1AP30153 589 aa18.13■□□□□ 0.49
RPAIN-207ENST00000570883 C5P01031 1676 aa18.12■□□□□ 0.49
RPAIN-207ENST00000570883 QSER1Q2KHR3 1735 aa18.12■□□□□ 0.49
RPAIN-207ENST00000570883 HMOX1P09601 288 aa18.11■□□□□ 0.49
RPAIN-207ENST00000570883 NBPF14Q5TI25 921 aa18.11■□□□□ 0.49
RPAIN-207ENST00000570883 IFNL2Q8IZJ0 200 aa18.11■□□□□ 0.49
RPAIN-207ENST00000570883 LRRC4BQ9NT99 713 aa18.11■□□□□ 0.49
RPAIN-207ENST00000570883 KDM6AO15550 1401 aaPredicted RBP18.11■□□□□ 0.49
RPAIN-207ENST00000570883 DDX10Q13206 875 aaKnown RBP18.1■□□□□ 0.49
RPAIN-207ENST00000570883 PLEKHO1Q53GL0 409 aaPredicted RBP18.1■□□□□ 0.49
RPAIN-207ENST00000570883 ZNF530Q6P9A1 599 aaPredicted RBP18.1■□□□□ 0.49
RPAIN-207ENST00000570883 ADAMTS7Q9UKP4 1686 aa18.09■□□□□ 0.49
RPAIN-207ENST00000570883 AMOTQ4VCS5 1084 aa18.09■□□□□ 0.49
RPAIN-207ENST00000570883 MPRIPQ6WCQ1 1025 aa18.08■□□□□ 0.48
RPAIN-207ENST00000570883 KCNQ4P56696 695 aa18.07■□□□□ 0.48
RPAIN-207ENST00000570883 PIGBQ92521 554 aa18.07■□□□□ 0.48
RPAIN-207ENST00000570883 PALLDQ8WX93 1383 aa18.06■□□□□ 0.48
RPAIN-207ENST00000570883 U2SURPO15042 1029 aaKnown RBP18.06■□□□□ 0.48
RPAIN-207ENST00000570883 ZNF827Q17R98 1081 aa18.05■□□□□ 0.48
RPAIN-207ENST00000570883 SLC27A3Q5K4L6 730 aa18.05■□□□□ 0.48
RPAIN-207ENST00000570883 CFAP53Q96M91 514 aa18.05■□□□□ 0.48
RPAIN-207ENST00000570883 PDGFDQ9GZP0 370 aaPredicted RBP18.05■□□□□ 0.48
RPAIN-207ENST00000570883 SLC15A2Q16348 729 aa18.04■□□□□ 0.48
RPAIN-207ENST00000570883 DCAF5Q96JK2 942 aa18.04■□□□□ 0.48
RPAIN-207ENST00000570883 STK32BQ9NY57 414 aa18.04■□□□□ 0.48
RPAIN-207ENST00000570883 MRC1P22897 1456 aa18.03■□□□□ 0.48
RPAIN-207ENST00000570883 TMOD3Q9NYL9 352 aa18.03■□□□□ 0.48
RPAIN-207ENST00000570883 CCNL1Q9UK58 526 aaPredicted RBP18.03■□□□□ 0.48
RPAIN-207ENST00000570883 C4BP0C0L5 1744 aa18.03■□□□□ 0.48
RPAIN-207ENST00000570883 UBR3Q6ZT12 1888 aa18.03■□□□□ 0.48
RPAIN-207ENST00000570883 ZNF831Q5JPB2 1677 aa18.03■□□□□ 0.48
RPAIN-207ENST00000570883 SIPA1L3O60292 1781 aaPredicted RBP18.02■□□□□ 0.48
RPAIN-207ENST00000570883 HSP90AB1P08238 724 aaKnown RBP18.02■□□□□ 0.48
RPAIN-207ENST00000570883 MTHFSDQ2M296 383 aaKnown RBP18.02■□□□□ 0.48
RPAIN-207ENST00000570883 C1orf141Q5JVX7 400 aa18.02■□□□□ 0.48
RPAIN-207ENST00000570883 AKT1S1Q96B36 256 aa18.02■□□□□ 0.48
RPAIN-207ENST00000570883 COL5A3P25940 1745 aaPredicted RBP18.01■□□□□ 0.47
RPAIN-207ENST00000570883 ERVV-2B6SEH9 535 aa18.01■□□□□ 0.47
RPAIN-207ENST00000570883 ASAP1Q9ULH1 1129 aa18.01■□□□□ 0.47
RPAIN-207ENST00000570883 DLG5Q8TDM6 1919 aa18.01■□□□□ 0.47
RPAIN-207ENST00000570883 AKAP4Q5JQC9 854 aa18■□□□□ 0.47
RPAIN-207ENST00000570883 SMARCC1Q92922 1105 aaPredicted RBP18■□□□□ 0.47
RPAIN-207ENST00000570883 RSPH6AQ9H0K4 717 aa18■□□□□ 0.47
RPAIN-207ENST00000570883 COL24A1Q17RW2 1714 aa18■□□□□ 0.47
RPAIN-207ENST00000570883 ATG3Q9NT62 314 aa17.99■□□□□ 0.47
RPAIN-207ENST00000570883 CICQ96RK0 1608 aaPredicted RBP17.98■□□□□ 0.47
RPAIN-207ENST00000570883 PRKAR2BP31323 418 aa17.98■□□□□ 0.47
RPAIN-207ENST00000570883 RALBP1Q15311 655 aa17.98■□□□□ 0.47
RPAIN-207ENST00000570883 NUDCQ9Y266 331 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms