RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 PHF14O94880 888 aa18.81■□□□□ 0.6
SMG6-207ENST00000570756 NFE2L2Q16236 605 aa18.81■□□□□ 0.6
SMG6-207ENST00000570756 MYRIPQ8NFW9 859 aa18.81■□□□□ 0.6
SMG6-207ENST00000570756 CLTCQ00610 1675 aaKnown RBP18.81■□□□□ 0.6
SMG6-207ENST00000570756 VGFO15240 615 aaPredicted RBP18.8■□□□□ 0.6
SMG6-207ENST00000570756 HMGN5P82970 282 aaKnown RBP18.8■□□□□ 0.6
SMG6-207ENST00000570756 PRIMPOLQ96LW4 560 aa18.8■□□□□ 0.6
SMG6-207ENST00000570756 NPATQ14207 1427 aa18.8■□□□□ 0.6
SMG6-207ENST00000570756 FBXO31Q5XUX0 539 aaPredicted RBP18.8■□□□□ 0.6
SMG6-207ENST00000570756 RNF214Q8ND24 703 aa18.8■□□□□ 0.6
SMG6-207ENST00000570756 SDSP20132 328 aa18.79■□□□□ 0.6
SMG6-207ENST00000570756 MCM2P49736 904 aa18.79■□□□□ 0.6
SMG6-207ENST00000570756 TSPYL6Q8N831 410 aa18.79■□□□□ 0.6
SMG6-207ENST00000570756 CAMSAP1Q5T5Y3 1602 aa18.79■□□□□ 0.6
SMG6-207ENST00000570756 CEBPAP49715 358 aaPredicted RBP18.79■□□□□ 0.6
SMG6-207ENST00000570756 TWISTNBQ3B726 338 aaPredicted RBP18.79■□□□□ 0.6
SMG6-207ENST00000570756 DNTTIP2Q5QJE6 756 aaKnown RBP18.79■□□□□ 0.6
SMG6-207ENST00000570756 UTP14CQ5TAP6 766 aaKnown RBP18.79■□□□□ 0.6
SMG6-207ENST00000570756 KNDC1Q76NI1 1749 aa18.78■□□□□ 0.6
SMG6-207ENST00000570756 ERC2O15083 957 aa18.78■□□□□ 0.6
SMG6-207ENST00000570756 NSFL1CQ9UNZ2 370 aaKnown RBP18.78■□□□□ 0.6
SMG6-207ENST00000570756 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.78■□□□□ 0.65e-9■■■■■ 28.9
SMG6-207ENST00000570756 FAM184AQ8NB25 1140 aa18.77■□□□□ 0.6
SMG6-207ENST00000570756 ARID3AQ99856 593 aa18.77■□□□□ 0.6
SMG6-207ENST00000570756 HDGFL2Q7Z4V5 671 aaPredicted RBP18.76■□□□□ 0.59
SMG6-207ENST00000570756 RPAP2Q8IXW5 612 aaPredicted RBP18.76■□□□□ 0.59
SMG6-207ENST00000570756 ANKRD44Q8N8A2 993 aa18.76■□□□□ 0.59
SMG6-207ENST00000570756 ESF1Q9H501 851 aaKnown RBP18.76■□□□□ 0.59
SMG6-207ENST00000570756 MBIPQ9NS73 344 aa18.76■□□□□ 0.59
SMG6-207ENST00000570756 ZNF853P0CG23 659 aa18.76■□□□□ 0.59
SMG6-207ENST00000570756 SAFB2Q14151 953 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMG6-207ENST00000570756 BRD1O95696 1058 aa18.75■□□□□ 0.59
SMG6-207ENST00000570756 C16orf71Q8IYS4 520 aaPredicted RBP18.75■□□□□ 0.59
SMG6-207ENST00000570756 ELL2O00472 640 aaPredicted RBP18.75■□□□□ 0.59
SMG6-207ENST00000570756 LMOD3Q0VAK6 560 aa18.75■□□□□ 0.59
SMG6-207ENST00000570756 UVSSAQ2YD98 709 aa18.75■□□□□ 0.59
SMG6-207ENST00000570756 KIF20BQ96Q89 1820 aa18.75■□□□□ 0.59
SMG6-207ENST00000570756 DMTNQ08495 405 aa18.74■□□□□ 0.59
SMG6-207ENST00000570756 PIBF1Q8WXW3 757 aa18.74■□□□□ 0.59
SMG6-207ENST00000570756 TMX3Q96JJ7 454 aa18.74■□□□□ 0.59
SMG6-207ENST00000570756 THUMPD2Q9BTF0 503 aaKnown RBP18.74■□□□□ 0.59
SMG6-207ENST00000570756 CD163L1Q9NR16 1453 aa18.74■□□□□ 0.59
SMG6-207ENST00000570756 GTF2F1P35269 517 aaKnown RBP eCLIP18.73■□□□□ 0.59
SMG6-207ENST00000570756 PODXL2Q9NZ53 605 aa18.73■□□□□ 0.59
SMG6-207ENST00000570756 ATP10DQ9P241 1426 aa18.73■□□□□ 0.59
SMG6-207ENST00000570756 NEXMIFQ5QGS0 1516 aa18.73■□□□□ 0.59
SMG6-207ENST00000570756 NEK4P51957 841 aa18.72■□□□□ 0.59
SMG6-207ENST00000570756 FOXD4L5Q5VV16 416 aaPredicted RBP18.72■□□□□ 0.59
SMG6-207ENST00000570756 FOXD4L4Q8WXT5 416 aaPredicted RBP18.72■□□□□ 0.59
SMG6-207ENST00000570756 INTS4Q96HW7 963 aaKnown RBP18.72■□□□□ 0.59
SMG6-207ENST00000570756 OTUD7AQ8TE49 926 aaPredicted RBP18.72■□□□□ 0.59
SMG6-207ENST00000570756 CHAMP1Q96JM3 812 aa18.72■□□□□ 0.59
SMG6-207ENST00000570756 PHACTR3Q96KR7 559 aa18.72■□□□□ 0.59
SMG6-207ENST00000570756 HAP1P54257 671 aaPredicted RBP18.71■□□□□ 0.59
SMG6-207ENST00000570756 CUL4AQ13619 759 aa18.71■□□□□ 0.59
SMG6-207ENST00000570756 FER1L4A9Z1Z3 1794 aa18.71■□□□□ 0.59
SMG6-207ENST00000570756 MCCP23508 829 aa18.71■□□□□ 0.59
SMG6-207ENST00000570756 PRDM10Q9NQV6 1147 aa18.71■□□□□ 0.59
SMG6-207ENST00000570756 PIK3C2BO00750 1634 aa18.7■□□□□ 0.58
SMG6-207ENST00000570756 NOLC1Q14978 699 aaKnown RBP eCLIP18.7■□□□□ 0.58
SMG6-207ENST00000570756 CEP85Q6P2H3 762 aa18.7■□□□□ 0.58
SMG6-207ENST00000570756 C8orf58Q8NAV2 365 aa18.7■□□□□ 0.58
SMG6-207ENST00000570756 HMOX1P09601 288 aa18.69■□□□□ 0.58
SMG6-207ENST00000570756 ZSCAN20P17040 1043 aaPredicted RBP18.68■□□□□ 0.58
SMG6-207ENST00000570756 NUTM2DQ5VT03 806 aaPredicted RBP18.68■□□□□ 0.58
SMG6-207ENST00000570756 GTPBP4Q9BZE4 634 aaKnown RBP18.68■□□□□ 0.58
SMG6-207ENST00000570756 POLKQ9UBT6 870 aa18.68■□□□□ 0.58
SMG6-207ENST00000570756 KIF3AQ9Y496 699 aa18.68■□□□□ 0.58
SMG6-207ENST00000570756 STK26Q9P289 416 aa18.68■□□□□ 0.58
SMG6-207ENST00000570756 ANAPC15P60006 121 aa18.67■□□□□ 0.58
SMG6-207ENST00000570756 OSBPL3Q9H4L5 887 aa18.67■□□□□ 0.58
SMG6-207ENST00000570756 RIMS2Q9UQ26 1411 aa18.67■□□□□ 0.58
SMG6-207ENST00000570756 RIMS1Q86UR5 1692 aaKnown RBP18.67■□□□□ 0.58
SMG6-207ENST00000570756 SMARCA5O60264 1052 aaPredicted RBP18.66■□□□□ 0.58
SMG6-207ENST00000570756 HMMRO75330 724 aa18.66■□□□□ 0.58
SMG6-207ENST00000570756 LETM1O95202 739 aaPredicted RBP18.66■□□□□ 0.58
SMG6-207ENST00000570756 MINK1Q8N4C8 1332 aaPredicted RBP18.66■□□□□ 0.58
SMG6-207ENST00000570756 PTPRMP28827 1452 aa18.66■□□□□ 0.58
SMG6-207ENST00000570756 APBB1O00213 710 aa18.66■□□□□ 0.58
SMG6-207ENST00000570756 SPTLC3Q9NUV7 552 aa18.66■□□□□ 0.58
SMG6-207ENST00000570756 ZHX1Q9UKY1 873 aaPredicted RBP18.66■□□□□ 0.58
SMG6-207ENST00000570756 RTL1A6NKG5 1358 aa18.66■□□□□ 0.58
SMG6-207ENST00000570756 CPSF1Q10570 1443 aaKnown RBP18.66■□□□□ 0.58
SMG6-207ENST00000570756 FKBP5Q13451 457 aaPredicted RBP18.65■□□□□ 0.58
SMG6-207ENST00000570756 ZNF710Q8N1W2 664 aa18.65■□□□□ 0.58
SMG6-207ENST00000570756 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
SMG6-207ENST00000570756 WDR33Q9C0J8 1336 aaKnown RBP18.65■□□□□ 0.58
SMG6-207ENST00000570756 PPP6R1Q9UPN7 881 aa18.65■□□□□ 0.58
SMG6-207ENST00000570756 PREX1Q8TCU6 1659 aa18.65■□□□□ 0.58
SMG6-207ENST00000570756 CCDC183Q5T5S1 534 aa18.64■□□□□ 0.58
SMG6-207ENST00000570756 USP25Q9UHP3 1055 aa18.64■□□□□ 0.58
SMG6-207ENST00000570756 YTHDC2Q9H6S0 1430 aaKnown RBP18.64■□□□□ 0.58
SMG6-207ENST00000570756 KLHL34Q8N239 644 aa18.64■□□□□ 0.57
SMG6-207ENST00000570756 DLG5Q8TDM6 1919 aa18.63■□□□□ 0.57
SMG6-207ENST00000570756 ADCY5O95622 1261 aa18.63■□□□□ 0.57
SMG6-207ENST00000570756 MAP2P11137 1827 aaKnown RBP18.63■□□□□ 0.57
SMG6-207ENST00000570756 MSH6P52701 1360 aa18.63■□□□□ 0.57
SMG6-207ENST00000570756 PTPRCP08575 1304 aa18.63■□□□□ 0.57
SMG6-207ENST00000570756 PDE1AP54750 535 aa18.63■□□□□ 0.57
SMG6-207ENST00000570756 CHAF1AQ13111 956 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms