RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 SLC16A10Q8TF71 515 aa10.59□□□□□ -0.71
SMG6-205ENST00000570659 C5P01031 1676 aa10.58□□□□□ -0.72
SMG6-205ENST00000570659 DDX54Q8TDD1 881 aaKnown RBP10.58□□□□□ -0.72
SMG6-205ENST00000570659 TAF1LQ8IZX4 1826 aa10.58□□□□□ -0.72
SMG6-205ENST00000570659 MEGF6O75095 1541 aa10.58□□□□□ -0.72
SMG6-205ENST00000570659 ANKRD24Q8TF21 1146 aa10.57□□□□□ -0.72
SMG6-205ENST00000570659 WDR90Q96KV7 1748 aa10.57□□□□□ -0.72
SMG6-205ENST00000570659 SBNO2Q9Y2G9 1366 aa10.56□□□□□ -0.72
SMG6-205ENST00000570659 GRIN3BO60391 1043 aa10.56□□□□□ -0.72
SMG6-205ENST00000570659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMG6-205ENST00000570659 CICQ96RK0 1608 aaPredicted RBP10.55□□□□□ -0.72
SMG6-205ENST00000570659 ANKRD36BQ8N2N9 1353 aa10.55□□□□□ -0.72
SMG6-205ENST00000570659 SLC27A3Q5K4L6 730 aa10.55□□□□□ -0.72
SMG6-205ENST00000570659 SYTL4Q96C24 671 aaPredicted RBP10.55□□□□□ -0.72
SMG6-205ENST00000570659 USP31Q70CQ4 1352 aa10.54□□□□□ -0.72
SMG6-205ENST00000570659 PCNTO95613 3336 aa10.54□□□□□ -0.72
SMG6-205ENST00000570659 MSH5O43196 834 aa10.54□□□□□ -0.72
SMG6-205ENST00000570659 UBR3Q6ZT12 1888 aa10.54□□□□□ -0.72
SMG6-205ENST00000570659 KCNH5Q8NCM2 988 aa10.54□□□□□ -0.72
SMG6-205ENST00000570659 LTV1Q96GA3 475 aaPredicted RBP10.54□□□□□ -0.72
SMG6-205ENST00000570659 NMRK2Q9NPI5 230 aa10.54□□□□□ -0.72
SMG6-205ENST00000570659 CCNL1Q9UK58 526 aaPredicted RBP10.54□□□□□ -0.72
SMG6-205ENST00000570659 IGSF1Q8N6C5 1336 aa10.54□□□□□ -0.72
SMG6-205ENST00000570659 KTN1Q86UP2 1357 aaKnown RBP10.53□□□□□ -0.72
SMG6-205ENST00000570659 N4BP2Q86UW6 1770 aaPredicted RBP10.53□□□□□ -0.72
SMG6-205ENST00000570659 C4BP0C0L5 1744 aa10.52□□□□□ -0.73
SMG6-205ENST00000570659 TTC21AQ8NDW8 1320 aa10.52□□□□□ -0.73
SMG6-205ENST00000570659 CD2APQ9Y5K6 639 aa10.51□□□□□ -0.73
SMG6-205ENST00000570659 MAP2P11137 1827 aaKnown RBP10.51□□□□□ -0.73
SMG6-205ENST00000570659 PXDNLA1KZ92 1463 aa10.5□□□□□ -0.73
SMG6-205ENST00000570659 USHBP1Q8N6Y0 703 aa10.5□□□□□ -0.73
SMG6-205ENST00000570659 STAC3Q96MF2 364 aa10.49□□□□□ -0.73
SMG6-205ENST00000570659 ITGB4P16144 1822 aa10.49□□□□□ -0.73
SMG6-205ENST00000570659 APLP1P51693 650 aa10.48□□□□□ -0.73
SMG6-205ENST00000570659 KIF13BQ9NQT8 1826 aa10.48□□□□□ -0.73
SMG6-205ENST00000570659 EVC2Q86UK5 1308 aa10.48□□□□□ -0.73
SMG6-205ENST00000570659 BRCA1P38398 1863 aaKnown RBP10.48□□□□□ -0.73
SMG6-205ENST00000570659 PHF14O94880 888 aa10.47□□□□□ -0.73
SMG6-205ENST00000570659 JMYQ8N9B5 988 aa10.47□□□□□ -0.73
SMG6-205ENST00000570659 IP6K1Q92551 441 aa10.47□□□□□ -0.73
SMG6-205ENST00000570659 ZNF692Q9BU19 519 aaPredicted RBP10.47□□□□□ -0.73
SMG6-205ENST00000570659 SLC12A5Q9H2X9 1139 aa10.47□□□□□ -0.73
SMG6-205ENST00000570659 MAP3K19Q56UN5 1328 aa10.47□□□□□ -0.73
SMG6-205ENST00000570659 NBPF6Q5VWK0 638 aa10.46□□□□□ -0.73
SMG6-205ENST00000570659 LINC00116Q8NCU8 138 aa10.46□□□□□ -0.73
SMG6-205ENST00000570659 L3MBTL2Q969R5 705 aa10.46□□□□□ -0.73
SMG6-205ENST00000570659 KLRG1Q96E93 195 aa10.46□□□□□ -0.73
SMG6-205ENST00000570659 NBPF4Q96M43 638 aa10.46□□□□□ -0.73
SMG6-205ENST00000570659 A0A1W2PP64 1363 aa10.46□□□□□ -0.74
SMG6-205ENST00000570659 PALLDQ8WX93 1383 aa10.46□□□□□ -0.74
SMG6-205ENST00000570659 KCPQ6ZWJ8 1503 aa10.45□□□□□ -0.74
SMG6-205ENST00000570659 USP47Q96K76 1375 aa10.45□□□□□ -0.74
SMG6-205ENST00000570659 TOMM70O94826 608 aa10.45□□□□□ -0.74
SMG6-205ENST00000570659 ZCRB1Q8TBF4 217 aaKnown RBP10.45□□□□□ -0.74
SMG6-205ENST00000570659 PKD1L3Q7Z443 1732 aa10.44□□□□□ -0.74
SMG6-205ENST00000570659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.44□□□□□ -0.74
SMG6-205ENST00000570659 A0A0G2JLW4 131 aa10.44□□□□□ -0.74
SMG6-205ENST00000570659 CYP27B1O15528 508 aa10.44□□□□□ -0.74
SMG6-205ENST00000570659 HOXC9P31274 260 aa10.44□□□□□ -0.74
SMG6-205ENST00000570659 PRELPP51888 382 aa10.44□□□□□ -0.74
SMG6-205ENST00000570659 ITPK1Q13572 414 aa10.44□□□□□ -0.74
SMG6-205ENST00000570659 TNS4Q8IZW8 715 aa10.44□□□□□ -0.74
SMG6-205ENST00000570659 KCNA3P22001 575 aa10.42□□□□□ -0.74
SMG6-205ENST00000570659 MPRIPQ6WCQ1 1025 aa10.42□□□□□ -0.74
SMG6-205ENST00000570659 SIN3AQ96ST3 1273 aa10.42□□□□□ -0.74
SMG6-205ENST00000570659 EDC4Q6P2E9 1401 aaKnown RBP10.41□□□□□ -0.74
SMG6-205ENST00000570659 C10orf71Q711Q0 1435 aa10.41□□□□□ -0.74
SMG6-205ENST00000570659 DPEP1P16444 411 aa10.41□□□□□ -0.74
SMG6-205ENST00000570659 RRS1Q15050 365 aaKnown RBP10.41□□□□□ -0.74
SMG6-205ENST00000570659 PIGBQ92521 554 aa10.41□□□□□ -0.74
SMG6-205ENST00000570659 SLC4A9Q96Q91 983 aa10.41□□□□□ -0.74
SMG6-205ENST00000570659 MMP10P09238 476 aa10.4□□□□□ -0.74
SMG6-205ENST00000570659 BCS1LQ9Y276 419 aa10.4□□□□□ -0.74
SMG6-205ENST00000570659 SBF1O95248 1867 aa10.4□□□□□ -0.75
SMG6-205ENST00000570659 NSD3Q9BZ95 1437 aa10.4□□□□□ -0.75
SMG6-205ENST00000570659 C9orf131Q5VYM1 1079 aa10.39□□□□□ -0.75
SMG6-205ENST00000570659 ARHGAP27Q6ZUM4 889 aa10.39□□□□□ -0.75
SMG6-205ENST00000570659 RBM46Q8TBY0 533 aaKnown RBP10.39□□□□□ -0.75
SMG6-205ENST00000570659 TMC1Q8TDI8 760 aa10.39□□□□□ -0.75
SMG6-205ENST00000570659 ARFGEF1Q9Y6D6 1849 aa10.39□□□□□ -0.75
SMG6-205ENST00000570659 ROCK2O75116 1388 aaKnown RBP10.39□□□□□ -0.75
SMG6-205ENST00000570659 C4AP0C0L4 1744 aa10.38□□□□□ -0.75
SMG6-205ENST00000570659 HSPA1AP0DMV8 641 aaKnown RBP10.38□□□□□ -0.75
SMG6-205ENST00000570659 HSPA1BP0DMV9 641 aaKnown RBP10.38□□□□□ -0.75
SMG6-205ENST00000570659 AK7Q96M32 723 aa10.38□□□□□ -0.75
SMG6-205ENST00000570659 RRAGCQ9HB90 399 aa10.38□□□□□ -0.75
SMG6-205ENST00000570659 ASAP1Q9ULH1 1129 aa10.38□□□□□ -0.75
SMG6-205ENST00000570659 MYH14Q7Z406 1995 aaKnown RBP10.37□□□□□ -0.75
SMG6-205ENST00000570659 SLC34A2O95436 690 aa10.37□□□□□ -0.75
SMG6-205ENST00000570659 HSP90AB2PQ58FF8 381 aa10.37□□□□□ -0.75
SMG6-205ENST00000570659 GNPATO15228 680 aa10.36□□□□□ -0.75
SMG6-205ENST00000570659 KDRP35968 1356 aa10.36□□□□□ -0.75
SMG6-205ENST00000570659 COL5A3P25940 1745 aaPredicted RBP10.36□□□□□ -0.75
SMG6-205ENST00000570659 TNRC6CQ9HCJ0 1690 aaKnown RBP10.35□□□□□ -0.75
SMG6-205ENST00000570659 LOC102724428A0A0B4J2F2 783 aa10.35□□□□□ -0.75
SMG6-205ENST00000570659 AMPHP49418 695 aa10.35□□□□□ -0.75
SMG6-205ENST00000570659 SIK1P57059 783 aa10.35□□□□□ -0.75
SMG6-205ENST00000570659 FLAD1Q8NFF5 587 aa10.35□□□□□ -0.75
SMG6-205ENST00000570659 ADAMTS7Q9UKP4 1686 aa10.34□□□□□ -0.75
SMG6-205ENST00000570659 FCHSD2O94868 740 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms