RNA–Protein interactions for RNA: ENST00000570641.1

SPNS2-202, Transcript of sphingolipid transporter 2, humanhuman

TSL 5

Gene SPNS2, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-202ENST00000570641 AMOTQ4VCS5 1084 aa23.73■■□□□ 1.39
SPNS2-202ENST00000570641 MEX3CQ5U5Q3 659 aaKnown RBP23.73■■□□□ 1.39
SPNS2-202ENST00000570641 NGLY1Q96IV0 654 aa23.73■■□□□ 1.39
SPNS2-202ENST00000570641 C8orf37Q96NL8 207 aa23.73■■□□□ 1.39
SPNS2-202ENST00000570641 MTHFSDQ2M296 383 aaKnown RBP23.72■■□□□ 1.39
SPNS2-202ENST00000570641 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.72■■□□□ 1.39
SPNS2-202ENST00000570641 GOLGA2Q08379 1002 aa23.71■■□□□ 1.39
SPNS2-202ENST00000570641 WDR63Q8IWG1 891 aa23.71■■□□□ 1.39
SPNS2-202ENST00000570641 TRIM35Q9UPQ4 493 aa23.71■■□□□ 1.39
SPNS2-202ENST00000570641 PKD1L3Q7Z443 1732 aa23.7■■□□□ 1.39
SPNS2-202ENST00000570641 MEGF6O75095 1541 aa23.7■■□□□ 1.38
SPNS2-202ENST00000570641 WNK3Q9BYP7 1800 aa23.7■■□□□ 1.38
SPNS2-202ENST00000570641 UNC5CLQ8IV45 518 aa23.68■■□□□ 1.38
SPNS2-202ENST00000570641 FNBP4Q8N3X1 1017 aaPredicted RBP23.68■■□□□ 1.38
SPNS2-202ENST00000570641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.68■■□□□ 1.38
SPNS2-202ENST00000570641 SPG7Q9UQ90 795 aa23.68■■□□□ 1.38
SPNS2-202ENST00000570641 OVOS2A0A0G2JMS6 1433 aa23.67■■□□□ 1.38
SPNS2-202ENST00000570641 HTATSF1O43719 755 aaKnown RBP23.67■■□□□ 1.38
SPNS2-202ENST00000570641 IL2RBP14784 551 aa23.67■■□□□ 1.38
SPNS2-202ENST00000570641 CALD1Q05682 793 aaKnown RBP23.67■■□□□ 1.38
SPNS2-202ENST00000570641 MAP3K5Q99683 1374 aa23.66■■□□□ 1.38
SPNS2-202ENST00000570641 ZNF530Q6P9A1 599 aaPredicted RBP23.66■■□□□ 1.38
SPNS2-202ENST00000570641 RTF1Q92541 710 aaKnown RBP23.66■■□□□ 1.38
SPNS2-202ENST00000570641 IL16Q14005 1332 aa23.65■■□□□ 1.38
SPNS2-202ENST00000570641 BCL9LQ86UU0 1499 aa23.65■■□□□ 1.38
SPNS2-202ENST00000570641 GNAT3A8MTJ3 354 aa23.65■■□□□ 1.38
SPNS2-202ENST00000570641 E9PSI1 815 aa23.65■■□□□ 1.38
SPNS2-202ENST00000570641 VIRMAQ69YN4 1812 aaKnown RBP23.64■■□□□ 1.38
SPNS2-202ENST00000570641 AKAP4Q5JQC9 854 aa23.64■■□□□ 1.37
SPNS2-202ENST00000570641 C1orf141Q5JVX7 400 aa23.64■■□□□ 1.37
SPNS2-202ENST00000570641 USP35Q9P2H5 1018 aa23.64■■□□□ 1.37
SPNS2-202ENST00000570641 THRAP3Q9Y2W1 955 aaKnown RBP23.64■■□□□ 1.37
SPNS2-202ENST00000570641 SPATA31A1Q5TZJ5 1347 aa23.63■■□□□ 1.37
SPNS2-202ENST00000570641 SLFN5Q08AF3 891 aa23.63■■□□□ 1.37
SPNS2-202ENST00000570641 CDCA7LQ96GN5 454 aa23.63■■□□□ 1.37
SPNS2-202ENST00000570641 USP21Q9UK80 565 aa23.63■■□□□ 1.37
SPNS2-202ENST00000570641 SPATA31A5Q5VU36 1347 aa23.62■■□□□ 1.37
SPNS2-202ENST00000570641 SPATA31A7Q8IWB4 1347 aa23.62■■□□□ 1.37
SPNS2-202ENST00000570641 VPS72Q15906 364 aa23.62■■□□□ 1.37
SPNS2-202ENST00000570641 POTEAQ6S8J7 498 aa23.62■■□□□ 1.37
SPNS2-202ENST00000570641 CCDC9Q9Y3X0 531 aaKnown RBP23.62■■□□□ 1.37
SPNS2-202ENST00000570641 DISP2A7MBM2 1401 aa23.61■■□□□ 1.37
SPNS2-202ENST00000570641 CDCA7Q9BWT1 371 aaPredicted RBP23.61■■□□□ 1.37
SPNS2-202ENST00000570641 AFF2P51816 1311 aa23.6■■□□□ 1.37
SPNS2-202ENST00000570641 LRRC37A3O60309 1634 aa23.6■■□□□ 1.37
SPNS2-202ENST00000570641 ZCRB1Q8TBF4 217 aaKnown RBP23.6■■□□□ 1.37
SPNS2-202ENST00000570641 SHANK3Q9BYB0 1731 aa23.59■■□□□ 1.37
SPNS2-202ENST00000570641 TRMT2AQ8IZ69 625 aaKnown RBP23.59■■□□□ 1.37
SPNS2-202ENST00000570641 MYH16Q9H6N6 1097 aa23.59■■□□□ 1.37
SPNS2-202ENST00000570641 DCTN1Q14203 1278 aa23.58■■□□□ 1.37
SPNS2-202ENST00000570641 MCM10Q7L590 875 aa23.58■■□□□ 1.37
SPNS2-202ENST00000570641 IFNL2Q8IZJ0 200 aa23.58■■□□□ 1.37
SPNS2-202ENST00000570641 THUMPD2Q9BTF0 503 aaKnown RBP23.58■■□□□ 1.37
SPNS2-202ENST00000570641 PCDH11XQ9BZA7 1347 aa23.58■■□□□ 1.36
SPNS2-202ENST00000570641 PCDH11YQ9BZA8 1340 aa23.58■■□□□ 1.36
SPNS2-202ENST00000570641 ADAMTS7Q9UKP4 1686 aa23.57■■□□□ 1.36
SPNS2-202ENST00000570641 DUSP27Q5VZP5 1158 aa23.57■■□□□ 1.36
SPNS2-202ENST00000570641 BARGINQ6ZT62 677 aa23.57■■□□□ 1.36
SPNS2-202ENST00000570641 SPINK5Q9NQ38 1064 aaPredicted RBP23.57■■□□□ 1.36
SPNS2-202ENST00000570641 SCN11AQ9UI33 1791 aa23.57■■□□□ 1.36
SPNS2-202ENST00000570641 PHKG2P15735 406 aa23.56■■□□□ 1.36
SPNS2-202ENST00000570641 GNAI1P63096 354 aa23.56■■□□□ 1.36
SPNS2-202ENST00000570641 IFT57Q9NWB7 429 aa23.56■■□□□ 1.36
SPNS2-202ENST00000570641 HSP90AB1P08238 724 aaKnown RBP23.55■■□□□ 1.36
SPNS2-202ENST00000570641 IL17REQ8NFR9 667 aa23.54■■□□□ 1.36
SPNS2-202ENST00000570641 CEMIPQ8WUJ3 1361 aa23.53■■□□□ 1.36
SPNS2-202ENST00000570641 ATRNO75882 1429 aa23.53■■□□□ 1.36
SPNS2-202ENST00000570641 CYP27B1O15528 508 aa23.53■■□□□ 1.36
SPNS2-202ENST00000570641 RNMTO43148 476 aaKnown RBP23.53■■□□□ 1.36
SPNS2-202ENST00000570641 LAS1LQ9Y4W2 734 aaKnown RBP23.53■■□□□ 1.36
SPNS2-202ENST00000570641 TNS2Q63HR2 1409 aa23.52■■□□□ 1.36
SPNS2-202ENST00000570641 ZNF853P0CG23 659 aa23.52■■□□□ 1.36
SPNS2-202ENST00000570641 CFAP44Q96MT7 982 aa23.52■■□□□ 1.36
SPNS2-202ENST00000570641 TRPC5Q9UL62 973 aaPredicted RBP23.52■■□□□ 1.36
SPNS2-202ENST00000570641 EXOC5O00471 708 aa23.51■■□□□ 1.35
SPNS2-202ENST00000570641 MPRIPQ6WCQ1 1025 aa23.51■■□□□ 1.35
SPNS2-202ENST00000570641 FANCIQ9NVI1 1328 aa23.51■■□□□ 1.35
SPNS2-202ENST00000570641 DCAF5Q96JK2 942 aa23.5■■□□□ 1.35
SPNS2-202ENST00000570641 LGR6Q9HBX8 967 aa23.5■■□□□ 1.35
SPNS2-202ENST00000570641 SIPA1L3O60292 1781 aaPredicted RBP23.5■■□□□ 1.35
SPNS2-202ENST00000570641 TEFQ10587 303 aa23.49■■□□□ 1.35
SPNS2-202ENST00000570641 DDX54Q8TDD1 881 aaKnown RBP23.49■■□□□ 1.35
SPNS2-202ENST00000570641 BABAM1Q9NWV8 329 aa23.49■■□□□ 1.35
SPNS2-202ENST00000570641 GLI3P10071 1580 aa23.48■■□□□ 1.35
SPNS2-202ENST00000570641 NKX1-1Q15270 411 aaPredicted RBP23.48■■□□□ 1.35
SPNS2-202ENST00000570641 TSR2Q969E8 191 aaKnown RBP23.48■■□□□ 1.35
SPNS2-202ENST00000570641 GJD4Q96KN9 370 aaPredicted RBP23.48■■□□□ 1.35
SPNS2-202ENST00000570641 KDM6AO15550 1401 aaPredicted RBP23.48■■□□□ 1.35
SPNS2-202ENST00000570641 CHL1O00533 1208 aa23.47■■□□□ 1.35
SPNS2-202ENST00000570641 TAF7Q15545 349 aaPredicted RBP23.47■■□□□ 1.35
SPNS2-202ENST00000570641 DDB1Q16531 1140 aa23.47■■□□□ 1.35
SPNS2-202ENST00000570641 FAM98CQ17RN3 349 aaKnown RBP23.46■■□□□ 1.35
SPNS2-202ENST00000570641 MBIPQ9NS73 344 aa23.46■■□□□ 1.35
SPNS2-202ENST00000570641 THSD7AQ9UPZ6 1657 aa23.46■■□□□ 1.35
SPNS2-202ENST00000570641 MRC1P22897 1456 aa23.45■■□□□ 1.34
SPNS2-202ENST00000570641 ZNF772Q68DY9 489 aaPredicted RBP23.45■■□□□ 1.34
SPNS2-202ENST00000570641 QTRT2Q9H974 415 aaKnown RBP23.45■■□□□ 1.34
SPNS2-202ENST00000570641 TSPYL4Q9UJ04 414 aa23.45■■□□□ 1.34
SPNS2-202ENST00000570641 KDM3BQ7LBC6 1761 aa23.45■■□□□ 1.34
SPNS2-202ENST00000570641 CT47B1P0C2W7 299 aaPredicted RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms