RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 MROH2AA6NES4 1674 aa18.7■□□□□ 0.58
USP43-202ENST00000570475 KCNJ4P48050 445 aa18.7■□□□□ 0.58
USP43-202ENST00000570475 PRIM1P49642 420 aaKnown RBP18.69■□□□□ 0.58
USP43-202ENST00000570475 XPCQ01831 940 aaPredicted RBP18.69■□□□□ 0.58
USP43-202ENST00000570475 POGZQ7Z3K3 1410 aa18.69■□□□□ 0.58
USP43-202ENST00000570475 CCDC173Q0VFZ6 552 aa18.69■□□□□ 0.58
USP43-202ENST00000570475 ZSCAN23Q3MJ62 389 aa18.69■□□□□ 0.58
USP43-202ENST00000570475 SURF6O75683 361 aaKnown RBP18.68■□□□□ 0.58
USP43-202ENST00000570475 GNAI2P04899 355 aa18.68■□□□□ 0.58
USP43-202ENST00000570475 NLRP6P59044 892 aa18.68■□□□□ 0.58
USP43-202ENST00000570475 USHBP1Q8N6Y0 703 aa18.68■□□□□ 0.58
USP43-202ENST00000570475 KLHL40Q2TBA0 621 aa18.68■□□□□ 0.58
USP43-202ENST00000570475 MSH6P52701 1360 aa18.67■□□□□ 0.58
USP43-202ENST00000570475 TAOK2Q9UL54 1235 aa18.67■□□□□ 0.58
USP43-202ENST00000570475 ABCC4O15439 1325 aa18.67■□□□□ 0.58
USP43-202ENST00000570475 RBM33Q96EV2 1170 aaKnown RBP18.67■□□□□ 0.58
USP43-202ENST00000570475 HDGFP51858 240 aaKnown RBP18.66■□□□□ 0.58
USP43-202ENST00000570475 GLI2P10070 1586 aa18.66■□□□□ 0.58
USP43-202ENST00000570475 LRRCC1Q9C099 1032 aa18.66■□□□□ 0.58
USP43-202ENST00000570475 ADGRB3O60242 1522 aa18.66■□□□□ 0.58
USP43-202ENST00000570475 ACEP12821 1306 aa18.65■□□□□ 0.58
USP43-202ENST00000570475 ANXA1P04083 346 aa18.65■□□□□ 0.58
USP43-202ENST00000570475 PDE1AP54750 535 aa18.65■□□□□ 0.58
USP43-202ENST00000570475 LRRFIP2Q9Y608 721 aaKnown RBP18.65■□□□□ 0.58
USP43-202ENST00000570475 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.65■□□□□ 0.58
USP43-202ENST00000570475 RBSNQ9H1K0 784 aa18.65■□□□□ 0.58
USP43-202ENST00000570475 ADGRB1O14514 1584 aa18.64■□□□□ 0.57
USP43-202ENST00000570475 ZSCAN30Q86W11 494 aa18.64■□□□□ 0.57
USP43-202ENST00000570475 TMX3Q96JJ7 454 aa18.64■□□□□ 0.57
USP43-202ENST00000570475 CCDC9Q9Y3X0 531 aaKnown RBP18.64■□□□□ 0.57
USP43-202ENST00000570475 UBTFL1P0CB47 393 aaPredicted RBP18.63■□□□□ 0.57
USP43-202ENST00000570475 MTHFSDQ2M296 383 aaKnown RBP18.63■□□□□ 0.57
USP43-202ENST00000570475 ISY1Q9ULR0 285 aaKnown RBP18.63■□□□□ 0.57
USP43-202ENST00000570475 RIMS2Q9UQ26 1411 aa18.63■□□□□ 0.57
USP43-202ENST00000570475 INO80Q9ULG1 1556 aaPredicted RBP18.63■□□□□ 0.57
USP43-202ENST00000570475 ZMYM3Q14202 1370 aa18.62■□□□□ 0.57
USP43-202ENST00000570475 MX1P20591 662 aa18.62■□□□□ 0.57
USP43-202ENST00000570475 CEBPAP49715 358 aaPredicted RBP18.62■□□□□ 0.57
USP43-202ENST00000570475 NCBP3Q53F19 620 aaKnown RBP18.62■□□□□ 0.57
USP43-202ENST00000570475 SHPRHQ149N8 1683 aa18.61■□□□□ 0.57
USP43-202ENST00000570475 ABCC3O15438 1527 aa18.61■□□□□ 0.57
USP43-202ENST00000570475 FIBPO43427 364 aa18.61■□□□□ 0.57
USP43-202ENST00000570475 ZNF853P0CG23 659 aa18.61■□□□□ 0.57
USP43-202ENST00000570475 CWC22Q9HCG8 908 aaKnown RBP18.61■□□□□ 0.57
USP43-202ENST00000570475 BCL11BQ9C0K0 894 aaPredicted RBP18.61■□□□□ 0.57
USP43-202ENST00000570475 PNMA6EA0A0J9YXQ4 647 aa18.6■□□□□ 0.57
USP43-202ENST00000570475 FLIIQ13045 1269 aa18.6■□□□□ 0.57
USP43-202ENST00000570475 UBE2Q2Q8WVN8 375 aa18.6■□□□□ 0.57
USP43-202ENST00000570475 LMBRD1Q9NUN5 540 aa18.6■□□□□ 0.57
USP43-202ENST00000570475 PALD1Q9ULE6 856 aa18.6■□□□□ 0.57
USP43-202ENST00000570475 NRXN1Q9ULB1 1477 aa18.6■□□□□ 0.57
USP43-202ENST00000570475 CCT4P50991 539 aaKnown RBP18.6■□□□□ 0.57
USP43-202ENST00000570475 HDGFL1Q5TGJ6 251 aa18.6■□□□□ 0.57
USP43-202ENST00000570475 CWC27Q6UX04 472 aaKnown RBP18.6■□□□□ 0.57
USP43-202ENST00000570475 NSFL1CQ9UNZ2 370 aaKnown RBP18.6■□□□□ 0.57
USP43-202ENST00000570475 TTC21BQ7Z4L5 1316 aa18.59■□□□□ 0.57
USP43-202ENST00000570475 KIDINS220Q9ULH0 1771 aa18.59■□□□□ 0.57
USP43-202ENST00000570475 ZFYVE9O95405 1425 aa18.59■□□□□ 0.57
USP43-202ENST00000570475 MROH1Q8NDA8 1641 aa18.59■□□□□ 0.57
USP43-202ENST00000570475 CHL1O00533 1208 aa18.58■□□□□ 0.57
USP43-202ENST00000570475 FAM135BQ49AJ0 1406 aa18.58■□□□□ 0.57
USP43-202ENST00000570475 VPS37CA5D8V6 355 aaPredicted RBP18.58■□□□□ 0.57
USP43-202ENST00000570475 GNAI3P08754 354 aa18.58■□□□□ 0.57
USP43-202ENST00000570475 CCDC30Q5VVM6 783 aa18.58■□□□□ 0.57
USP43-202ENST00000570475 SPG7Q9UQ90 795 aa18.58■□□□□ 0.57
USP43-202ENST00000570475 LRRC7Q96NW7 1537 aa18.58■□□□□ 0.56
USP43-202ENST00000570475 SRGAP3O43295 1099 aa18.58■□□□□ 0.56
USP43-202ENST00000570475 CPA1P15085 419 aa18.58■□□□□ 0.56
USP43-202ENST00000570475 ZNF830Q96NB3 372 aaPredicted RBP18.58■□□□□ 0.56
USP43-202ENST00000570475 KIAA1210Q9ULL0 1709 aa18.57■□□□□ 0.56
USP43-202ENST00000570475 VWDEQ8N2E2 1590 aa18.57■□□□□ 0.56
USP43-202ENST00000570475 TMEM63CQ9P1W3 806 aa18.57■□□□□ 0.56
USP43-202ENST00000570475 METP08581 1390 aa18.57■□□□□ 0.56
USP43-202ENST00000570475 GPT2Q8TD30 523 aa18.57■□□□□ 0.56
USP43-202ENST00000570475 ABTB2Q8N961 1025 aa18.56■□□□□ 0.56
USP43-202ENST00000570475 SYAP1Q96A49 352 aaPredicted RBP18.56■□□□□ 0.56
USP43-202ENST00000570475 RTL1A6NKG5 1358 aa18.56■□□□□ 0.56
USP43-202ENST00000570475 AK9Q5TCS8 1911 aa18.56■□□□□ 0.56
USP43-202ENST00000570475 DDIT3P35638 169 aa18.56■□□□□ 0.56
USP43-202ENST00000570475 AIMP1Q12904 312 aaKnown RBP18.56■□□□□ 0.56
USP43-202ENST00000570475 NAP1L2Q9ULW6 460 aaPredicted RBP18.56■□□□□ 0.56
USP43-202ENST00000570475 SETBP1Q9Y6X0 1596 aa18.56■□□□□ 0.56
USP43-202ENST00000570475 DEPDC5O75140 1603 aa18.55■□□□□ 0.56
USP43-202ENST00000570475 ESYT1Q9BSJ8 1104 aa18.55■□□□□ 0.56
USP43-202ENST00000570475 PNPLA6Q8IY17 1366 aa18.55■□□□□ 0.56
USP43-202ENST00000570475 UNC5CLQ8IV45 518 aa18.55■□□□□ 0.56
USP43-202ENST00000570475 PHAXQ9H814 394 aaKnown RBP18.55■□□□□ 0.56
USP43-202ENST00000570475 DIAPH3Q9NSV4 1193 aa18.55■□□□□ 0.56
USP43-202ENST00000570475 MAP3K19Q56UN5 1328 aa18.55■□□□□ 0.56
USP43-202ENST00000570475 CAMSAP1Q5T5Y3 1602 aa18.55■□□□□ 0.56
USP43-202ENST00000570475 PTPRCP08575 1304 aa18.54■□□□□ 0.56
USP43-202ENST00000570475 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.54■□□□□ 0.56
USP43-202ENST00000570475 ARAP3Q8WWN8 1544 aa18.54■□□□□ 0.56
USP43-202ENST00000570475 MLH3Q9UHC1 1453 aa18.53■□□□□ 0.56
USP43-202ENST00000570475 PRR36Q9H6K5 1346 aa18.53■□□□□ 0.56
USP43-202ENST00000570475 EYA1Q99502 592 aa18.53■□□□□ 0.56
USP43-202ENST00000570475 TSPY26PQ9H489 355 aa18.53■□□□□ 0.56
USP43-202ENST00000570475 C9orf78Q9NZ63 289 aaPredicted RBP18.53■□□□□ 0.56
USP43-202ENST00000570475 SMC3Q9UQE7 1217 aa18.53■□□□□ 0.56
USP43-202ENST00000570475 EID1Q9Y6B2 187 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms