RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 CHMP5Q9NZZ3 219 aa17.67■□□□□ 0.42
GCOM1-213ENST00000569945 MAP2P11137 1827 aaKnown RBP17.67■□□□□ 0.42
GCOM1-213ENST00000569945 CRYBG1Q9Y4K1 1723 aa17.67■□□□□ 0.42
GCOM1-213ENST00000569945 SLIT3O75094 1523 aa17.67■□□□□ 0.42
GCOM1-213ENST00000569945 ZNF521Q96K83 1311 aa17.66■□□□□ 0.42
GCOM1-213ENST00000569945 NFAT5O94916 1531 aa17.66■□□□□ 0.42
GCOM1-213ENST00000569945 MAP3K19Q56UN5 1328 aa17.66■□□□□ 0.42
GCOM1-213ENST00000569945 PHRF1Q9P1Y6 1649 aaKnown RBP17.65■□□□□ 0.42
GCOM1-213ENST00000569945 DDX11L8A8MPP1 907 aa17.65■□□□□ 0.42
GCOM1-213ENST00000569945 PPP1R9BQ96SB3 815 aa17.65■□□□□ 0.42
GCOM1-213ENST00000569945 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.64■□□□□ 0.41
GCOM1-213ENST00000569945 ZSCAN30Q86W11 494 aa17.64■□□□□ 0.41
GCOM1-213ENST00000569945 PEAK1Q9H792 1746 aa17.64■□□□□ 0.41
GCOM1-213ENST00000569945 NUTM2BA6NNL0 878 aaPredicted RBP17.64■□□□□ 0.41
GCOM1-213ENST00000569945 NUTM2EB1AL46 878 aaPredicted RBP17.64■□□□□ 0.41
GCOM1-213ENST00000569945 NUTM2AQ8IVF1 878 aaPredicted RBP17.64■□□□□ 0.41
GCOM1-213ENST00000569945 AATKQ6ZMQ8 1374 aa17.63■□□□□ 0.41
GCOM1-213ENST00000569945 ABCA3Q99758 1704 aa17.63■□□□□ 0.41
GCOM1-213ENST00000569945 CHRNA2Q15822 529 aa17.63■□□□□ 0.41
GCOM1-213ENST00000569945 HAP1P54257 671 aaPredicted RBP17.62■□□□□ 0.41
GCOM1-213ENST00000569945 ARHGEF25Q86VW2 580 aa17.62■□□□□ 0.41
GCOM1-213ENST00000569945 KCNH5Q8NCM2 988 aa17.62■□□□□ 0.41
GCOM1-213ENST00000569945 KIAA0232Q92628 1395 aa17.61■□□□□ 0.41
GCOM1-213ENST00000569945 HSP90AB2PQ58FF8 381 aa17.61■□□□□ 0.41
GCOM1-213ENST00000569945 UTP14CQ5TAP6 766 aaKnown RBP17.61■□□□□ 0.41
GCOM1-213ENST00000569945 FAM13BQ9NYF5 915 aa17.61■□□□□ 0.41
GCOM1-213ENST00000569945 COL22A1Q8NFW1 1626 aaPredicted RBP17.61■□□□□ 0.41
GCOM1-213ENST00000569945 CCDC173Q0VFZ6 552 aa17.61■□□□□ 0.41
GCOM1-213ENST00000569945 FBXO41Q8TF61 875 aa17.61■□□□□ 0.41
GCOM1-213ENST00000569945 UPF2Q9HAU5 1272 aaKnown RBP17.61■□□□□ 0.41
GCOM1-213ENST00000569945 AXIN2Q9Y2T1 843 aa17.61■□□□□ 0.41
GCOM1-213ENST00000569945 LTN1O94822 1766 aa17.6■□□□□ 0.41
GCOM1-213ENST00000569945 ADAMTS2O95450 1211 aa17.6■□□□□ 0.41
GCOM1-213ENST00000569945 SPRYD3Q8NCJ5 442 aa17.6■□□□□ 0.41
GCOM1-213ENST00000569945 JCADQ9P266 1359 aa17.6■□□□□ 0.41
GCOM1-213ENST00000569945 AMPHP49418 695 aa17.59■□□□□ 0.41
GCOM1-213ENST00000569945 TRMT2AQ8IZ69 625 aaKnown RBP17.59■□□□□ 0.41
GCOM1-213ENST00000569945 SHPRHQ149N8 1683 aa17.58■□□□□ 0.41
GCOM1-213ENST00000569945 HOXC9P31274 260 aa17.58■□□□□ 0.41
GCOM1-213ENST00000569945 DDIT3P35638 169 aa17.58■□□□□ 0.41
GCOM1-213ENST00000569945 MTERF4Q7Z6M4 381 aaKnown RBP17.58■□□□□ 0.41
GCOM1-213ENST00000569945 FAM83GA6ND36 823 aa17.58■□□□□ 0.4
GCOM1-213ENST00000569945 ZHX1Q9UKY1 873 aaPredicted RBP17.58■□□□□ 0.4
GCOM1-213ENST00000569945 ADAMTS8Q9UP79 889 aa17.58■□□□□ 0.4
GCOM1-213ENST00000569945 GOLGA2Q08379 1002 aa17.57■□□□□ 0.4
GCOM1-213ENST00000569945 DMTNQ08495 405 aa17.57■□□□□ 0.4
GCOM1-213ENST00000569945 SLFN5Q08AF3 891 aa17.57■□□□□ 0.4
GCOM1-213ENST00000569945 LTV1Q96GA3 475 aaPredicted RBP17.57■□□□□ 0.4
GCOM1-213ENST00000569945 COL3A1P02461 1466 aaPredicted RBP17.56■□□□□ 0.4
GCOM1-213ENST00000569945 PRDM11Q9NQV5 511 aa17.56■□□□□ 0.4
GCOM1-213ENST00000569945 LRP6O75581 1613 aa17.56■□□□□ 0.4
GCOM1-213ENST00000569945 IP6K1Q92551 441 aa17.55■□□□□ 0.4
GCOM1-213ENST00000569945 RGPD5Q99666 1765 aa17.55■□□□□ 0.4
GCOM1-213ENST00000569945 COL18A1P39060 1754 aa17.54■□□□□ 0.4
GCOM1-213ENST00000569945 CPDO75976 1380 aa17.54■□□□□ 0.4
GCOM1-213ENST00000569945 FLT4P35916 1363 aa17.54■□□□□ 0.4
GCOM1-213ENST00000569945 R3HCC1Q9Y3T6 440 aaKnown RBP17.54■□□□□ 0.4
GCOM1-213ENST00000569945 CDK12Q9NYV4 1490 aaPredicted RBP17.54■□□□□ 0.4
GCOM1-213ENST00000569945 EIF4A2Q14240 407 aaKnown RBP17.54■□□□□ 0.4
GCOM1-213ENST00000569945 CLUAP1Q96AJ1 413 aa17.53■□□□□ 0.4
GCOM1-213ENST00000569945 ZSCAN20P17040 1043 aaPredicted RBP17.53■□□□□ 0.4
GCOM1-213ENST00000569945 MSNP26038 577 aaKnown RBP17.53■□□□□ 0.4
GCOM1-213ENST00000569945 GTF2E1P29083 439 aaPredicted RBP17.53■□□□□ 0.4
GCOM1-213ENST00000569945 IL13P35225 146 aa17.53■□□□□ 0.4
GCOM1-213ENST00000569945 UQCRHLA0A096LP55 91 aa17.52■□□□□ 0.4
GCOM1-213ENST00000569945 DYNC1I1O14576 645 aa17.52■□□□□ 0.4
GCOM1-213ENST00000569945 ZNF500O60304 480 aaPredicted RBP17.52■□□□□ 0.4
GCOM1-213ENST00000569945 BCAR3O75815 825 aa17.52■□□□□ 0.4
GCOM1-213ENST00000569945 UQCRHP07919 91 aa17.52■□□□□ 0.4
GCOM1-213ENST00000569945 CAMTA1Q9Y6Y1 1673 aa17.52■□□□□ 0.4
GCOM1-213ENST00000569945 PRDM10Q9NQV6 1147 aa17.52■□□□□ 0.39
GCOM1-213ENST00000569945 DIAPH1O60610 1272 aaKnown RBP17.51■□□□□ 0.39
GCOM1-213ENST00000569945 SKOR2Q2VWA4 1001 aaPredicted RBP17.51■□□□□ 0.39
GCOM1-213ENST00000569945 CFAP53Q96M91 514 aa17.51■□□□□ 0.39
GCOM1-213ENST00000569945 PDE3AQ14432 1141 aa17.5■□□□□ 0.39
GCOM1-213ENST00000569945 HS1BP3Q53T59 392 aa17.5■□□□□ 0.39
GCOM1-213ENST00000569945 U2SURPO15042 1029 aaKnown RBP17.5■□□□□ 0.39
GCOM1-213ENST00000569945 NASPP49321 788 aaPredicted RBP17.5■□□□□ 0.39
GCOM1-213ENST00000569945 ANKRD24Q8TF21 1146 aa17.5■□□□□ 0.39
GCOM1-213ENST00000569945 BBXQ8WY36 941 aaPredicted RBP17.5■□□□□ 0.39
GCOM1-213ENST00000569945 SPATA31A6Q5VVP1 1343 aa17.5■□□□□ 0.39
GCOM1-213ENST00000569945 RTL1A6NKG5 1358 aa17.5■□□□□ 0.39
GCOM1-213ENST00000569945 TNPO1Q92973 898 aaKnown RBP17.49■□□□□ 0.39
GCOM1-213ENST00000569945 C8orf37Q96NL8 207 aa17.49■□□□□ 0.39
GCOM1-213ENST00000569945 BCL11BQ9C0K0 894 aaPredicted RBP17.49■□□□□ 0.39
GCOM1-213ENST00000569945 BTG4Q9NY30 223 aa17.49■□□□□ 0.39
GCOM1-213ENST00000569945 LMO7Q8WWI1 1683 aa17.49■□□□□ 0.39
GCOM1-213ENST00000569945 USHBP1Q8N6Y0 703 aa17.49■□□□□ 0.39
GCOM1-213ENST00000569945 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.49■□□□□ 0.39
GCOM1-213ENST00000569945 STRN4Q9NRL3 753 aa17.48■□□□□ 0.39
GCOM1-213ENST00000569945 NOL7Q9UMY1 257 aaKnown RBP17.48■□□□□ 0.39
GCOM1-213ENST00000569945 IBTKQ9P2D0 1353 aaPredicted RBP17.48■□□□□ 0.39
GCOM1-213ENST00000569945 RGPD2P0DJD1 1756 aa17.48■□□□□ 0.39
GCOM1-213ENST00000569945 KIF24Q5T7B8 1368 aa17.48■□□□□ 0.39
GCOM1-213ENST00000569945 CCDC94Q9BW85 323 aaPredicted RBP17.48■□□□□ 0.39
GCOM1-213ENST00000569945 HMOX1P09601 288 aa17.47■□□□□ 0.39
GCOM1-213ENST00000569945 NBPF6Q5VWK0 638 aa17.47■□□□□ 0.39
GCOM1-213ENST00000569945 AEBP1Q8IUX7 1158 aa17.47■□□□□ 0.39
GCOM1-213ENST00000569945 NBPF4Q96M43 638 aa17.47■□□□□ 0.39
GCOM1-213ENST00000569945 EYA1Q99502 592 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms