RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 BCL11BQ9C0K0 894 aaPredicted RBP17.87■□□□□ 0.45
CNOT1-220ENST00000569916 PER1O15534 1290 aaPredicted RBP17.84■□□□□ 0.45
CNOT1-220ENST00000569916 MORC1Q86VD1 984 aa17.84■□□□□ 0.45
CNOT1-220ENST00000569916 PLSCR1O15162 318 aa17.83■□□□□ 0.44
CNOT1-220ENST00000569916 KCNQ2O43526 872 aa17.83■□□□□ 0.44
CNOT1-220ENST00000569916 DDX54Q8TDD1 881 aaKnown RBP17.83■□□□□ 0.44
CNOT1-220ENST00000569916 ZCRB1Q8TBF4 217 aaKnown RBP17.82■□□□□ 0.44
CNOT1-220ENST00000569916 RAPGEF4Q8WZA2 1011 aa17.82■□□□□ 0.44
CNOT1-220ENST00000569916 ACSBG1Q96GR2 724 aa17.82■□□□□ 0.44
CNOT1-220ENST00000569916 KAT6BQ8WYB5 2073 aa17.81■□□□□ 0.44
CNOT1-220ENST00000569916 TOGARAM1Q9Y4F4 1720 aa17.81■□□□□ 0.44
CNOT1-220ENST00000569916 TATP17735 454 aaPredicted RBP17.81■□□□□ 0.44
CNOT1-220ENST00000569916 EIF4A2Q14240 407 aaKnown RBP17.81■□□□□ 0.44
CNOT1-220ENST00000569916 EYA1Q99502 592 aa17.81■□□□□ 0.44
CNOT1-220ENST00000569916 LRP5O75197 1615 aa17.8■□□□□ 0.44
CNOT1-220ENST00000569916 PSDA5PKW4 1024 aaPredicted RBP17.8■□□□□ 0.44
CNOT1-220ENST00000569916 NPC1L1Q9UHC9 1359 aa17.79■□□□□ 0.44
CNOT1-220ENST00000569916 PAPPAQ13219 1627 aa17.78■□□□□ 0.44
CNOT1-220ENST00000569916 LY75O60449 1722 aa17.78■□□□□ 0.44
CNOT1-220ENST00000569916 ITGB4P16144 1822 aa17.77■□□□□ 0.44
CNOT1-220ENST00000569916 IGSF1Q8N6C5 1336 aa17.77■□□□□ 0.44
CNOT1-220ENST00000569916 PCDH11XQ9BZA7 1347 aa17.77■□□□□ 0.44
CNOT1-220ENST00000569916 PCDH11YQ9BZA8 1340 aa17.77■□□□□ 0.44
CNOT1-220ENST00000569916 R3HDM1Q15032 1099 aaKnown RBP17.77■□□□□ 0.44
CNOT1-220ENST00000569916 PROM2Q8N271 834 aa17.77■□□□□ 0.44
CNOT1-220ENST00000569916 CC2D1BQ5T0F9 858 aaKnown RBP17.76■□□□□ 0.43
CNOT1-220ENST00000569916 PLEKHG2Q9H7P9 1386 aa17.75■□□□□ 0.43
CNOT1-220ENST00000569916 CASZ1Q86V15 1759 aa17.74■□□□□ 0.43
CNOT1-220ENST00000569916 CYP27B1O15528 508 aa17.74■□□□□ 0.43
CNOT1-220ENST00000569916 TXNRD1Q16881 649 aa17.74■□□□□ 0.43
CNOT1-220ENST00000569916 NBPF14Q5TI25 921 aa17.73■□□□□ 0.43
CNOT1-220ENST00000569916 ANO8Q9HCE9 1232 aaPredicted RBP17.73■□□□□ 0.43
CNOT1-220ENST00000569916 PRIM1P49642 420 aaKnown RBP17.72■□□□□ 0.43
CNOT1-220ENST00000569916 COL3A1P02461 1466 aaPredicted RBP17.71■□□□□ 0.43
CNOT1-220ENST00000569916 MTHFSP49914 203 aa17.71■□□□□ 0.43
CNOT1-220ENST00000569916 SYTL4Q96C24 671 aaPredicted RBP17.71■□□□□ 0.43
CNOT1-220ENST00000569916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.71■□□□□ 0.431e-13■■■□□ 16.8
CNOT1-220ENST00000569916 SPG7Q9UQ90 795 aa17.71■□□□□ 0.43
CNOT1-220ENST00000569916 KDRP35968 1356 aa17.7■□□□□ 0.42
CNOT1-220ENST00000569916 IL13P35225 146 aa17.7■□□□□ 0.42
CNOT1-220ENST00000569916 CNGB1Q14028 1251 aaPredicted RBP17.69■□□□□ 0.42
CNOT1-220ENST00000569916 QSER1Q2KHR3 1735 aa17.69■□□□□ 0.42
CNOT1-220ENST00000569916 TUBGCP6Q96RT7 1819 aa17.68■□□□□ 0.42
CNOT1-220ENST00000569916 NKX1-1Q15270 411 aaPredicted RBP17.68■□□□□ 0.42
CNOT1-220ENST00000569916 AEBP1Q8IUX7 1158 aa17.68■□□□□ 0.42
CNOT1-220ENST00000569916 TAF1LQ8IZX4 1826 aa17.67■□□□□ 0.42
CNOT1-220ENST00000569916 SRCAPQ6ZRS2 3230 aa17.67■□□□□ 0.42
CNOT1-220ENST00000569916 C5P01031 1676 aa17.67■□□□□ 0.42
CNOT1-220ENST00000569916 PHKG2P15735 406 aa17.66■□□□□ 0.42
CNOT1-220ENST00000569916 LRRC4BQ9NT99 713 aa17.66■□□□□ 0.42
CNOT1-220ENST00000569916 VIRMAQ69YN4 1812 aaKnown RBP17.65■□□□□ 0.42
CNOT1-220ENST00000569916 SULT6B1Q6IMI4 303 aa17.65■□□□□ 0.42
CNOT1-220ENST00000569916 IFNL2Q8IZJ0 200 aa17.65■□□□□ 0.42
CNOT1-220ENST00000569916 SLC15A2Q16348 729 aa17.64■□□□□ 0.41
CNOT1-220ENST00000569916 SLC27A3Q5K4L6 730 aa17.64■□□□□ 0.41
CNOT1-220ENST00000569916 STK32BQ9NY57 414 aa17.64■□□□□ 0.41
CNOT1-220ENST00000569916 SCN11AQ9UI33 1791 aa17.63■□□□□ 0.41
CNOT1-220ENST00000569916 DIAPH1O60610 1272 aaKnown RBP17.62■□□□□ 0.41
CNOT1-220ENST00000569916 PLEKHO1Q53GL0 409 aaPredicted RBP17.62■□□□□ 0.41
CNOT1-220ENST00000569916 MPRIPQ6WCQ1 1025 aa17.62■□□□□ 0.41
CNOT1-220ENST00000569916 PALLDQ8WX93 1383 aa17.62■□□□□ 0.41
CNOT1-220ENST00000569916 KDM6AO15550 1401 aaPredicted RBP17.62■□□□□ 0.41
CNOT1-220ENST00000569916 KCNQ4P56696 695 aa17.61■□□□□ 0.41
CNOT1-220ENST00000569916 ZNF827Q17R98 1081 aa17.61■□□□□ 0.41
CNOT1-220ENST00000569916 AMOTQ4VCS5 1084 aa17.61■□□□□ 0.41
CNOT1-220ENST00000569916 ZNF530Q6P9A1 599 aaPredicted RBP17.61■□□□□ 0.41
CNOT1-220ENST00000569916 PDGFDQ9GZP0 370 aaPredicted RBP17.61■□□□□ 0.41
CNOT1-220ENST00000569916 PIGBQ92521 554 aa17.6■□□□□ 0.41
CNOT1-220ENST00000569916 CCNL1Q9UK58 526 aaPredicted RBP17.6■□□□□ 0.41
CNOT1-220ENST00000569916 ADAMTS7Q9UKP4 1686 aa17.59■□□□□ 0.41
CNOT1-220ENST00000569916 HMOX1P09601 288 aa17.59■□□□□ 0.41
CNOT1-220ENST00000569916 AKT1S1Q96B36 256 aa17.59■□□□□ 0.41
CNOT1-220ENST00000569916 C4BP0C0L5 1744 aa17.58■□□□□ 0.41
CNOT1-220ENST00000569916 HSP90AB1P08238 724 aaKnown RBP17.58■□□□□ 0.4
CNOT1-220ENST00000569916 PPP2R1AP30153 589 aa17.58■□□□□ 0.4
CNOT1-220ENST00000569916 DCAF5Q96JK2 942 aa17.58■□□□□ 0.4
CNOT1-220ENST00000569916 TMOD3Q9NYL9 352 aa17.58■□□□□ 0.4
CNOT1-220ENST00000569916 ZNF831Q5JPB2 1677 aa17.58■□□□□ 0.4
CNOT1-220ENST00000569916 COL24A1Q17RW2 1714 aa17.57■□□□□ 0.4
CNOT1-220ENST00000569916 SMARCC1Q92922 1105 aaPredicted RBP17.56■□□□□ 0.4
CNOT1-220ENST00000569916 SPON1Q9HCB6 807 aa17.56■□□□□ 0.4
CNOT1-220ENST00000569916 ERVV-2B6SEH9 535 aa17.55■□□□□ 0.4
CNOT1-220ENST00000569916 C1orf141Q5JVX7 400 aa17.55■□□□□ 0.4
CNOT1-220ENST00000569916 CFAP53Q96M91 514 aa17.55■□□□□ 0.4
CNOT1-220ENST00000569916 MRC1P22897 1456 aa17.55■□□□□ 0.4
CNOT1-220ENST00000569916 COL5A3P25940 1745 aaPredicted RBP17.55■□□□□ 0.4
CNOT1-220ENST00000569916 UBR3Q6ZT12 1888 aa17.54■□□□□ 0.4
CNOT1-220ENST00000569916 U2SURPO15042 1029 aaKnown RBP17.54■□□□□ 0.4
CNOT1-220ENST00000569916 ZBTB7AO95365 584 aa17.54■□□□□ 0.4
CNOT1-220ENST00000569916 PNPLA7Q6ZV29 1317 aa17.53■□□□□ 0.4
CNOT1-220ENST00000569916 ASAP1Q9ULH1 1129 aa17.53■□□□□ 0.4
CNOT1-220ENST00000569916 CICQ96RK0 1608 aaPredicted RBP17.53■□□□□ 0.4
CNOT1-220ENST00000569916 AKAP4Q5JQC9 854 aa17.52■□□□□ 0.4
CNOT1-220ENST00000569916 ATG3Q9NT62 314 aa17.52■□□□□ 0.4
CNOT1-220ENST00000569916 ZEB1P37275 1124 aaPredicted RBP17.51■□□□□ 0.39
CNOT1-220ENST00000569916 MTHFSDQ2M296 383 aaKnown RBP17.51■□□□□ 0.39
CNOT1-220ENST00000569916 MTFR1LQ9H019 292 aa17.51■□□□□ 0.39
CNOT1-220ENST00000569916 SIPA1L3O60292 1781 aaPredicted RBP17.51■□□□□ 0.39
CNOT1-220ENST00000569916 TJP1Q07157 1748 aa17.5■□□□□ 0.39
CNOT1-220ENST00000569916 LOC102724428A0A0B4J2F2 783 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms