RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-223ENST00000569784 SBF2Q86WG5 1849 aa11.94□□□□□ -0.5
SCAPER-223ENST00000569784 EDC4Q6P2E9 1401 aaKnown RBP11.94□□□□□ -0.5
SCAPER-223ENST00000569784 ST20-MTHFSA0A0A6YYL1 179 aa11.93□□□□□ -0.5
SCAPER-223ENST00000569784 IL2RBP14784 551 aa11.93□□□□□ -0.5
SCAPER-223ENST00000569784 CD44P16070 742 aaKnown RBP11.93□□□□□ -0.5
SCAPER-223ENST00000569784 MARCH10Q8NA82 808 aaPredicted RBP11.93□□□□□ -0.5
SCAPER-223ENST00000569784 ANKRD24Q8TF21 1146 aa11.93□□□□□ -0.5
SCAPER-223ENST00000569784 KAT6BQ8WYB5 2073 aa11.93□□□□□ -0.5
SCAPER-223ENST00000569784 NFAT5O94916 1531 aa11.92□□□□□ -0.5
SCAPER-223ENST00000569784 ABCC6O95255 1503 aa11.92□□□□□ -0.5
SCAPER-223ENST00000569784 PLSCR1O15162 318 aa11.92□□□□□ -0.5
SCAPER-223ENST00000569784 AMPHP49418 695 aa11.92□□□□□ -0.5
SCAPER-223ENST00000569784 TMF1P82094 1093 aa11.92□□□□□ -0.5
SCAPER-223ENST00000569784 STK32BQ9NY57 414 aa11.92□□□□□ -0.5
SCAPER-223ENST00000569784 A0A1W2PP64 1363 aa11.92□□□□□ -0.5
SCAPER-223ENST00000569784 USP31Q70CQ4 1352 aa11.92□□□□□ -0.5
SCAPER-223ENST00000569784 NINLQ9Y2I6 1382 aa11.92□□□□□ -0.5
SCAPER-223ENST00000569784 ACSBG1Q96GR2 724 aa11.91□□□□□ -0.5
SCAPER-223ENST00000569784 PUS7Q96PZ0 661 aaKnown RBP11.91□□□□□ -0.5
SCAPER-223ENST00000569784 ERBB3P21860 1342 aa11.9□□□□□ -0.5
SCAPER-223ENST00000569784 KCNQ2O43526 872 aa11.9□□□□□ -0.5
SCAPER-223ENST00000569784 CDCA8Q53HL2 280 aa11.9□□□□□ -0.5
SCAPER-223ENST00000569784 DCAF8Q5TAQ9 597 aa11.9□□□□□ -0.5
SCAPER-223ENST00000569784 PEAK1Q9H792 1746 aa11.9□□□□□ -0.5
SCAPER-223ENST00000569784 RGPD3A6NKT7 1758 aaPredicted RBP11.9□□□□□ -0.51
SCAPER-223ENST00000569784 RGPD4Q7Z3J3 1758 aa11.9□□□□□ -0.51
SCAPER-223ENST00000569784 TNS2Q63HR2 1409 aa11.89□□□□□ -0.51
SCAPER-223ENST00000569784 DDX54Q8TDD1 881 aaKnown RBP11.89□□□□□ -0.51
SCAPER-223ENST00000569784 PCGF6Q9BYE7 350 aa11.89□□□□□ -0.51
SCAPER-223ENST00000569784 USP54Q70EL1 1684 aa11.88□□□□□ -0.51
SCAPER-223ENST00000569784 TXNRD1Q16881 649 aa11.88□□□□□ -0.51
SCAPER-223ENST00000569784 SYTL4Q96C24 671 aaPredicted RBP11.88□□□□□ -0.51
SCAPER-223ENST00000569784 POLR3GLQ9BT43 218 aa11.88□□□□□ -0.51
SCAPER-223ENST00000569784 CD163L1Q9NR16 1453 aa11.88□□□□□ -0.51
SCAPER-223ENST00000569784 FAM208AQ9UK61 1670 aaKnown RBP11.87□□□□□ -0.51
SCAPER-223ENST00000569784 SMG6Q86US8 1419 aaKnown RBP11.87□□□□□ -0.51
SCAPER-223ENST00000569784 IP6K1Q92551 441 aa11.87□□□□□ -0.51
SCAPER-223ENST00000569784 CIZ1Q9ULV3 898 aaPredicted RBP11.87□□□□□ -0.51
SCAPER-223ENST00000569784 PTF1AQ7RTS3 328 aa11.86□□□□□ -0.51
SCAPER-223ENST00000569784 USP47Q96K76 1375 aa11.86□□□□□ -0.51
SCAPER-223ENST00000569784 NHSQ6T4R5 1651 aa11.85□□□□□ -0.51
SCAPER-223ENST00000569784 ANKRD36BQ8N2N9 1353 aa11.85□□□□□ -0.51
SCAPER-223ENST00000569784 ZBTB7AO95365 584 aa11.85□□□□□ -0.51
SCAPER-223ENST00000569784 FAM212AQ96EL1 285 aa11.85□□□□□ -0.51
SCAPER-223ENST00000569784 RTN4Q9NQC3 1192 aaKnown RBP11.85□□□□□ -0.51
SCAPER-223ENST00000569784 BCL9O00512 1426 aa11.85□□□□□ -0.51
SCAPER-223ENST00000569784 HOXC9P31274 260 aa11.84□□□□□ -0.51
SCAPER-223ENST00000569784 SLC15A2Q16348 729 aa11.84□□□□□ -0.51
SCAPER-223ENST00000569784 TESK2Q96S53 571 aa11.84□□□□□ -0.51
SCAPER-223ENST00000569784 GGNBP2Q9H3C7 697 aa11.84□□□□□ -0.51
SCAPER-223ENST00000569784 RAPGEF4Q8WZA2 1011 aa11.83□□□□□ -0.52
SCAPER-223ENST00000569784 ANO8Q9HCE9 1232 aaPredicted RBP11.83□□□□□ -0.52
SCAPER-223ENST00000569784 BTAF1O14981 1849 aa11.83□□□□□ -0.52
SCAPER-223ENST00000569784 KIF20BQ96Q89 1820 aa11.83□□□□□ -0.52
SCAPER-223ENST00000569784 MAP3K19Q56UN5 1328 aa11.83□□□□□ -0.52
SCAPER-223ENST00000569784 PPM1GO15355 546 aaPredicted RBP11.82□□□□□ -0.52
SCAPER-223ENST00000569784 YY1P25490 414 aa11.82□□□□□ -0.52
SCAPER-223ENST00000569784 GSE1Q14687 1217 aa11.82□□□□□ -0.52
SCAPER-223ENST00000569784 RRS1Q15050 365 aaKnown RBP11.82□□□□□ -0.52
SCAPER-223ENST00000569784 ZCRB1Q8TBF4 217 aaKnown RBP11.82□□□□□ -0.52
SCAPER-223ENST00000569784 PHF12Q96QT6 1004 aa11.82□□□□□ -0.52
SCAPER-223ENST00000569784 TATP17735 454 aaPredicted RBP11.81□□□□□ -0.52
SCAPER-223ENST00000569784 FBLN1P23142 703 aa11.81□□□□□ -0.52
SCAPER-223ENST00000569784 RGPD2P0DJD1 1756 aa11.81□□□□□ -0.52
SCAPER-223ENST00000569784 RTL1A6NKG5 1358 aa11.8□□□□□ -0.52
SCAPER-223ENST00000569784 FYB1O15117 783 aa11.79□□□□□ -0.52
SCAPER-223ENST00000569784 PRIM1P49642 420 aaKnown RBP11.79□□□□□ -0.52
SCAPER-223ENST00000569784 USHBP1Q8N6Y0 703 aa11.79□□□□□ -0.52
SCAPER-223ENST00000569784 MTFR1LQ9H019 292 aa11.79□□□□□ -0.52
SCAPER-223ENST00000569784 TFCP2L1Q9NZI6 479 aa11.79□□□□□ -0.52
SCAPER-223ENST00000569784 TIMELESSQ9UNS1 1208 aa11.79□□□□□ -0.52
SCAPER-223ENST00000569784 CASZ1Q86V15 1759 aa11.79□□□□□ -0.52
SCAPER-223ENST00000569784 DOT1LQ8TEK3 1739 aa11.78□□□□□ -0.52
SCAPER-223ENST00000569784 PYGBP11216 843 aa11.78□□□□□ -0.52
SCAPER-223ENST00000569784 POLD1P28340 1107 aa11.78□□□□□ -0.52
SCAPER-223ENST00000569784 SLC27A3Q5K4L6 730 aa11.78□□□□□ -0.52
SCAPER-223ENST00000569784 ZNF579Q8NAF0 562 aaKnown RBP11.78□□□□□ -0.52
SCAPER-223ENST00000569784 CCER1Q8TC90 406 aaPredicted RBP11.78□□□□□ -0.52
SCAPER-223ENST00000569784 PDGFDQ9GZP0 370 aaPredicted RBP11.78□□□□□ -0.52
SCAPER-223ENST00000569784 HMGB2P26583 209 aaKnown RBP11.77□□□□□ -0.53
SCAPER-223ENST00000569784 CGNL1Q0VF96 1302 aa11.77□□□□□ -0.53
SCAPER-223ENST00000569784 MYOM1P52179 1685 aa11.77□□□□□ -0.53
SCAPER-223ENST00000569784 FLT4P35916 1363 aa11.77□□□□□ -0.53
SCAPER-223ENST00000569784 NBPF6Q5VWK0 638 aa11.76□□□□□ -0.53
SCAPER-223ENST00000569784 NBPF4Q96M43 638 aa11.76□□□□□ -0.53
SCAPER-223ENST00000569784 ARXQ96QS3 562 aa11.76□□□□□ -0.53
SCAPER-223ENST00000569784 CCNL1Q9UK58 526 aaPredicted RBP11.76□□□□□ -0.53
SCAPER-223ENST00000569784 NSD3Q9BZ95 1437 aa11.76□□□□□ -0.53
SCAPER-223ENST00000569784 HSP90AB2PQ58FF8 381 aa11.75□□□□□ -0.53
SCAPER-223ENST00000569784 PELP1Q8IZL8 1130 aaKnown RBP11.75□□□□□ -0.53
SCAPER-223ENST00000569784 KIF12Q96FN5 646 aa11.75□□□□□ -0.53
SCAPER-223ENST00000569784 FHDC1Q9C0D6 1143 aaPredicted RBP11.75□□□□□ -0.53
SCAPER-223ENST00000569784 PCDH11XQ9BZA7 1347 aa11.75□□□□□ -0.53
SCAPER-223ENST00000569784 PCDH11YQ9BZA8 1340 aa11.75□□□□□ -0.53
SCAPER-223ENST00000569784 CLSPNQ9HAW4 1339 aa11.75□□□□□ -0.53
SCAPER-223ENST00000569784 TNNT2P45379 298 aaPredicted RBP11.74□□□□□ -0.53
SCAPER-223ENST00000569784 AMER1Q5JTC6 1135 aaPredicted RBP11.74□□□□□ -0.53
SCAPER-223ENST00000569784 INSRP06213 1382 aa11.74□□□□□ -0.53
SCAPER-223ENST00000569784 MEGF6O75095 1541 aa11.74□□□□□ -0.53
SCAPER-223ENST00000569784 MAP3K13O43283 966 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms