RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 EIF4A2Q14240 407 aaKnown RBP18.79■□□□□ 0.6
HERPUD1-218ENST00000569569 DDX54Q8TDD1 881 aaKnown RBP18.79■□□□□ 0.6
HERPUD1-218ENST00000569569 EYA1Q99502 592 aa18.79■□□□□ 0.6
HERPUD1-218ENST00000569569 ZEB1P37275 1124 aaPredicted RBP18.78■□□□□ 0.6
HERPUD1-218ENST00000569569 EZH2Q15910 746 aaKnown RBP18.78■□□□□ 0.6
HERPUD1-218ENST00000569569 CAMKK2Q96RR4 588 aa18.78■□□□□ 0.6
HERPUD1-218ENST00000569569 NCAPD2Q15021 1401 aa18.77■□□□□ 0.6
HERPUD1-218ENST00000569569 PARD3Q8TEW0 1356 aa18.77■□□□□ 0.6
HERPUD1-218ENST00000569569 NHSQ6T4R5 1651 aa18.76■□□□□ 0.59
HERPUD1-218ENST00000569569 RGPD3A6NKT7 1758 aaPredicted RBP18.76■□□□□ 0.59
HERPUD1-218ENST00000569569 RGPD4Q7Z3J3 1758 aa18.76■□□□□ 0.59
HERPUD1-218ENST00000569569 PLSCR1O15162 318 aa18.75■□□□□ 0.59
HERPUD1-218ENST00000569569 PTF1AQ7RTS3 328 aa18.75■□□□□ 0.59
HERPUD1-218ENST00000569569 RREB1Q92766 1687 aa18.74■□□□□ 0.59
HERPUD1-218ENST00000569569 MTHFSP49914 203 aa18.74■□□□□ 0.59
HERPUD1-218ENST00000569569 CNGB1Q14028 1251 aaPredicted RBP18.74■□□□□ 0.59
HERPUD1-218ENST00000569569 ACSBG1Q96GR2 724 aa18.74■□□□□ 0.59
HERPUD1-218ENST00000569569 KCNQ2O43526 872 aa18.73■□□□□ 0.59
HERPUD1-218ENST00000569569 PKD1L3Q7Z443 1732 aa18.73■□□□□ 0.59
HERPUD1-218ENST00000569569 BTAF1O14981 1849 aa18.72■□□□□ 0.59
HERPUD1-218ENST00000569569 IGSF1Q8N6C5 1336 aa18.72■□□□□ 0.59
HERPUD1-218ENST00000569569 DOT1LQ8TEK3 1739 aa18.71■□□□□ 0.59
HERPUD1-218ENST00000569569 PCDH11XQ9BZA7 1347 aa18.71■□□□□ 0.59
HERPUD1-218ENST00000569569 PCDH11YQ9BZA8 1340 aa18.71■□□□□ 0.59
HERPUD1-218ENST00000569569 IL13P35225 146 aa18.7■□□□□ 0.58
HERPUD1-218ENST00000569569 NUP188Q5SRE5 1749 aa18.7■□□□□ 0.58
HERPUD1-218ENST00000569569 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.7■□□□□ 0.58
HERPUD1-218ENST00000569569 SPG7Q9UQ90 795 aa18.7■□□□□ 0.58
HERPUD1-218ENST00000569569 PLEKHG2Q9H7P9 1386 aa18.68■□□□□ 0.58
HERPUD1-218ENST00000569569 CYP27B1O15528 508 aa18.67■□□□□ 0.58
HERPUD1-218ENST00000569569 PRIM1P49642 420 aaKnown RBP18.67■□□□□ 0.58
HERPUD1-218ENST00000569569 ITGB4P16144 1822 aa18.67■□□□□ 0.58
HERPUD1-218ENST00000569569 DIAPH1O60610 1272 aaKnown RBP18.66■□□□□ 0.58
HERPUD1-218ENST00000569569 NBPF14Q5TI25 921 aa18.66■□□□□ 0.58
HERPUD1-218ENST00000569569 PROM2Q8N271 834 aa18.66■□□□□ 0.58
HERPUD1-218ENST00000569569 SYTL4Q96C24 671 aaPredicted RBP18.66■□□□□ 0.58
HERPUD1-218ENST00000569569 SULT6B1Q6IMI4 303 aa18.65■□□□□ 0.58
HERPUD1-218ENST00000569569 NKX1-1Q15270 411 aaPredicted RBP18.64■□□□□ 0.57
HERPUD1-218ENST00000569569 TXNRD1Q16881 649 aa18.64■□□□□ 0.57
HERPUD1-218ENST00000569569 PLEKHO1Q53GL0 409 aaPredicted RBP18.64■□□□□ 0.57
HERPUD1-218ENST00000569569 IFNL2Q8IZJ0 200 aa18.64■□□□□ 0.57
HERPUD1-218ENST00000569569 PSDA5PKW4 1024 aaPredicted RBP18.63■□□□□ 0.57
HERPUD1-218ENST00000569569 AMOTQ4VCS5 1084 aa18.63■□□□□ 0.57
HERPUD1-218ENST00000569569 AEBP1Q8IUX7 1158 aa18.63■□□□□ 0.57
HERPUD1-218ENST00000569569 KDRP35968 1356 aa18.63■□□□□ 0.57
HERPUD1-218ENST00000569569 PPP2R1AP30153 589 aa18.62■□□□□ 0.57
HERPUD1-218ENST00000569569 DDX10Q13206 875 aaKnown RBP18.62■□□□□ 0.57
HERPUD1-218ENST00000569569 R3HDM1Q15032 1099 aaKnown RBP18.62■□□□□ 0.57
HERPUD1-218ENST00000569569 TOGARAM1Q9Y4F4 1720 aa18.61■□□□□ 0.57
HERPUD1-218ENST00000569569 PHKG2P15735 406 aa18.61■□□□□ 0.57
HERPUD1-218ENST00000569569 CFAP53Q96M91 514 aa18.61■□□□□ 0.57
HERPUD1-218ENST00000569569 LY75O60449 1722 aa18.6■□□□□ 0.57
HERPUD1-218ENST00000569569 COL3A1P02461 1466 aaPredicted RBP18.6■□□□□ 0.57
HERPUD1-218ENST00000569569 HSP90AB1P08238 724 aaKnown RBP18.58■□□□□ 0.56
HERPUD1-218ENST00000569569 HMOX1P09601 288 aa18.58■□□□□ 0.56
HERPUD1-218ENST00000569569 MPRIPQ6WCQ1 1025 aa18.58■□□□□ 0.56
HERPUD1-218ENST00000569569 SLC27A3Q5K4L6 730 aa18.57■□□□□ 0.56
HERPUD1-218ENST00000569569 ZNF530Q6P9A1 599 aaPredicted RBP18.57■□□□□ 0.56
HERPUD1-218ENST00000569569 VIRMAQ69YN4 1812 aaKnown RBP18.57■□□□□ 0.56
HERPUD1-218ENST00000569569 U2SURPO15042 1029 aaKnown RBP18.56■□□□□ 0.56
HERPUD1-218ENST00000569569 C1orf141Q5JVX7 400 aa18.55■□□□□ 0.56
HERPUD1-218ENST00000569569 DCAF5Q96JK2 942 aa18.55■□□□□ 0.56
HERPUD1-218ENST00000569569 ANO8Q9HCE9 1232 aaPredicted RBP18.55■□□□□ 0.56
HERPUD1-218ENST00000569569 STK32BQ9NY57 414 aa18.55■□□□□ 0.56
HERPUD1-218ENST00000569569 NUDCQ9Y266 331 aa18.55■□□□□ 0.56
HERPUD1-218ENST00000569569 PIGBQ92521 554 aa18.54■□□□□ 0.56
HERPUD1-218ENST00000569569 LRRC4BQ9NT99 713 aa18.54■□□□□ 0.56
HERPUD1-218ENST00000569569 SCN11AQ9UI33 1791 aa18.53■□□□□ 0.56
HERPUD1-218ENST00000569569 ERVV-2B6SEH9 535 aa18.53■□□□□ 0.56
HERPUD1-218ENST00000569569 RALBP1Q15311 655 aa18.53■□□□□ 0.56
HERPUD1-218ENST00000569569 SLC15A2Q16348 729 aa18.53■□□□□ 0.56
HERPUD1-218ENST00000569569 SMARCC1Q92922 1105 aaPredicted RBP18.53■□□□□ 0.56
HERPUD1-218ENST00000569569 TMOD3Q9NYL9 352 aa18.53■□□□□ 0.56
HERPUD1-218ENST00000569569 PAPPAQ13219 1627 aa18.52■□□□□ 0.56
HERPUD1-218ENST00000569569 TAF1LQ8IZX4 1826 aa18.51■□□□□ 0.55
HERPUD1-218ENST00000569569 AKAP4Q5JQC9 854 aa18.51■□□□□ 0.55
HERPUD1-218ENST00000569569 CCNL1Q9UK58 526 aaPredicted RBP18.51■□□□□ 0.55
HERPUD1-218ENST00000569569 HMGB2P26583 209 aaKnown RBP18.5■□□□□ 0.55
HERPUD1-218ENST00000569569 PALLDQ8WX93 1383 aa18.5■□□□□ 0.55
HERPUD1-218ENST00000569569 KDM6AO15550 1401 aaPredicted RBP18.49■□□□□ 0.55
HERPUD1-218ENST00000569569 LRP5O75197 1615 aa18.49■□□□□ 0.55
HERPUD1-218ENST00000569569 KCNQ4P56696 695 aa18.49■□□□□ 0.55
HERPUD1-218ENST00000569569 MTHFSDQ2M296 383 aaKnown RBP18.49■□□□□ 0.55
HERPUD1-218ENST00000569569 SRCAPQ6ZRS2 3230 aa18.48■□□□□ 0.55
HERPUD1-218ENST00000569569 CASZ1Q86V15 1759 aa18.48■□□□□ 0.55
HERPUD1-218ENST00000569569 U2AF1L5P0DN76 240 aaPredicted RBP18.48■□□□□ 0.55
HERPUD1-218ENST00000569569 CABP4P57796 275 aa18.48■□□□□ 0.55
HERPUD1-218ENST00000569569 U2AF1Q01081 240 aaKnown RBP eCLIP18.48■□□□□ 0.55
HERPUD1-218ENST00000569569 QSER1Q2KHR3 1735 aa18.48■□□□□ 0.55
HERPUD1-218ENST00000569569 C5P01031 1676 aa18.47■□□□□ 0.55
HERPUD1-218ENST00000569569 AKT1S1Q96B36 256 aa18.47■□□□□ 0.55
HERPUD1-218ENST00000569569 ASAP1Q9ULH1 1129 aa18.47■□□□□ 0.55
HERPUD1-218ENST00000569569 ZNF316A6NFI3 1004 aaPredicted RBP18.46■□□□□ 0.55
HERPUD1-218ENST00000569569 FCHSD2O94868 740 aa18.46■□□□□ 0.55
HERPUD1-218ENST00000569569 ZNF827Q17R98 1081 aa18.46■□□□□ 0.55
HERPUD1-218ENST00000569569 GAS2L2Q8NHY3 880 aa18.46■□□□□ 0.55
HERPUD1-218ENST00000569569 RSPH6AQ9H0K4 717 aa18.46■□□□□ 0.55
HERPUD1-218ENST00000569569 ATG3Q9NT62 314 aa18.46■□□□□ 0.55
HERPUD1-218ENST00000569569 TUBGCP6Q96RT7 1819 aa18.46■□□□□ 0.55
HERPUD1-218ENST00000569569 PRKAR2BP31323 418 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms