RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-218ENST00000569440 WDR90Q96KV7 1748 aa9.32□□□□□ -0.92
BBS4-218ENST00000569440 CSB-PGBD3P0DP91 1061 aa9.32□□□□□ -0.92
BBS4-218ENST00000569440 NLRP6P59044 892 aa9.32□□□□□ -0.92
BBS4-218ENST00000569440 FKBP8Q14318 412 aa9.31□□□□□ -0.92
BBS4-218ENST00000569440 C16orf71Q8IYS4 520 aaPredicted RBP9.31□□□□□ -0.92
BBS4-218ENST00000569440 ZNF692Q9BU19 519 aaPredicted RBP9.31□□□□□ -0.92
BBS4-218ENST00000569440 NHSQ6T4R5 1651 aa9.31□□□□□ -0.92
BBS4-218ENST00000569440 PPIP5K1Q6PFW1 1433 aa9.31□□□□□ -0.92
BBS4-218ENST00000569440 ARHGEF28Q8N1W1 1705 aaKnown RBP9.3□□□□□ -0.92
BBS4-218ENST00000569440 PRDM10Q9NQV6 1147 aa9.29□□□□□ -0.92
BBS4-218ENST00000569440 SLIT3O75094 1523 aa9.29□□□□□ -0.92
BBS4-218ENST00000569440 ABCC6O95255 1503 aa9.29□□□□□ -0.92
BBS4-218ENST00000569440 CPSF1Q10570 1443 aaKnown RBP9.29□□□□□ -0.92
BBS4-218ENST00000569440 QSER1Q2KHR3 1735 aa9.28□□□□□ -0.92
BBS4-218ENST00000569440 CICQ96RK0 1608 aaPredicted RBP9.28□□□□□ -0.92
BBS4-218ENST00000569440 IL2RBP14784 551 aa9.28□□□□□ -0.92
BBS4-218ENST00000569440 RGS19P49795 217 aa9.28□□□□□ -0.92
BBS4-218ENST00000569440 SMC1BQ8NDV3 1235 aa9.28□□□□□ -0.92
BBS4-218ENST00000569440 FLAD1Q8NFF5 587 aa9.28□□□□□ -0.92
BBS4-218ENST00000569440 CCNL1Q9UK58 526 aaPredicted RBP9.28□□□□□ -0.92
BBS4-218ENST00000569440 C10orf71Q711Q0 1435 aa9.28□□□□□ -0.92
BBS4-218ENST00000569440 SPDYE4A6NLX3 237 aa9.27□□□□□ -0.93
BBS4-218ENST00000569440 PRIM1P49642 420 aaKnown RBP9.27□□□□□ -0.93
BBS4-218ENST00000569440 COL18A1P39060 1754 aa9.27□□□□□ -0.93
BBS4-218ENST00000569440 FOXN1O15353 648 aa9.26□□□□□ -0.93
BBS4-218ENST00000569440 MLLT1Q03111 559 aaPredicted RBP9.26□□□□□ -0.93
BBS4-218ENST00000569440 KCNH5Q8NCM2 988 aa9.26□□□□□ -0.93
BBS4-218ENST00000569440 MPHOSPH9Q99550 1183 aa9.26□□□□□ -0.93
BBS4-218ENST00000569440 RRAGCQ9HB90 399 aa9.26□□□□□ -0.93
BBS4-218ENST00000569440 TRPM1Q7Z4N2 1603 aa9.26□□□□□ -0.93
BBS4-218ENST00000569440 NSD2O96028 1365 aa9.25□□□□□ -0.93
BBS4-218ENST00000569440 C9orf131Q5VYM1 1079 aa9.25□□□□□ -0.93
BBS4-218ENST00000569440 ARHGAP27Q6ZUM4 889 aa9.25□□□□□ -0.93
BBS4-218ENST00000569440 ABHD8Q96I13 439 aa9.25□□□□□ -0.93
BBS4-218ENST00000569440 KDM2BQ8NHM5 1336 aa9.25□□□□□ -0.93
BBS4-218ENST00000569440 NLRP2Q9NX02 1062 aa9.24□□□□□ -0.93
BBS4-218ENST00000569440 SSUH2Q9Y2M2 353 aa9.24□□□□□ -0.93
BBS4-218ENST00000569440 AKAP12Q02952 1782 aa9.24□□□□□ -0.93
BBS4-218ENST00000569440 ANKRD36BQ8N2N9 1353 aa9.24□□□□□ -0.93
BBS4-218ENST00000569440 PLEKHG2Q9H7P9 1386 aa9.24□□□□□ -0.93
BBS4-218ENST00000569440 TGFB2P61812 414 aa9.23□□□□□ -0.93
BBS4-218ENST00000569440 DDX54Q8TDD1 881 aaKnown RBP9.23□□□□□ -0.93
BBS4-218ENST00000569440 SYTL4Q96C24 671 aaPredicted RBP9.23□□□□□ -0.93
BBS4-218ENST00000569440 BCS1LQ9Y276 419 aa9.23□□□□□ -0.93
BBS4-218ENST00000569440 BTAF1O14981 1849 aa9.23□□□□□ -0.93
BBS4-218ENST00000569440 ERBB3P21860 1342 aa9.23□□□□□ -0.93
BBS4-218ENST00000569440 PXDNLA1KZ92 1463 aa9.22□□□□□ -0.93
BBS4-218ENST00000569440 WNK3Q9BYP7 1800 aa9.22□□□□□ -0.93
BBS4-218ENST00000569440 HMGB2P26583 209 aaKnown RBP9.22□□□□□ -0.93
BBS4-218ENST00000569440 CTCFP49711 727 aaPredicted RBP9.22□□□□□ -0.93
BBS4-218ENST00000569440 AMIGO3Q86WK7 504 aa9.22□□□□□ -0.93
BBS4-218ENST00000569440 CABP1Q9NZU7 370 aa9.22□□□□□ -0.93
BBS4-218ENST00000569440 KCPQ6ZWJ8 1503 aa9.21□□□□□ -0.93
BBS4-218ENST00000569440 ITSN1Q15811 1721 aa9.21□□□□□ -0.94
BBS4-218ENST00000569440 A0A0G2JLW4 131 aa9.2□□□□□ -0.94
BBS4-218ENST00000569440 SOX12O15370 315 aa9.2□□□□□ -0.94
BBS4-218ENST00000569440 SMIM5Q71RC9 77 aa9.2□□□□□ -0.94
BBS4-218ENST00000569440 CABP2Q9NPB3 220 aa9.2□□□□□ -0.94
BBS4-218ENST00000569440 SRPK2P78362 688 aaKnown RBP9.19□□□□□ -0.94
BBS4-218ENST00000569440 REM2Q8IYK8 340 aaPredicted RBP9.19□□□□□ -0.94
BBS4-218ENST00000569440 TTC21BQ7Z4L5 1316 aa9.19□□□□□ -0.94
BBS4-218ENST00000569440 USP47Q96K76 1375 aa9.19□□□□□ -0.94
BBS4-218ENST00000569440 TUBGCP6Q96RT7 1819 aa9.19□□□□□ -0.94
BBS4-218ENST00000569440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.18□□□□□ -0.94
BBS4-218ENST00000569440 FCHSD2O94868 740 aa9.18□□□□□ -0.94
BBS4-218ENST00000569440 VEGFAP15692 232 aaPredicted RBP9.18□□□□□ -0.94
BBS4-218ENST00000569440 KCNA3P22001 575 aa9.18□□□□□ -0.94
BBS4-218ENST00000569440 ANKRD24Q8TF21 1146 aa9.18□□□□□ -0.94
BBS4-218ENST00000569440 STAC3Q96MF2 364 aa9.18□□□□□ -0.94
BBS4-218ENST00000569440 CREBZFQ9NS37 354 aa9.18□□□□□ -0.94
BBS4-218ENST00000569440 MKRN1Q9UHC7 482 aaKnown RBP9.18□□□□□ -0.94
BBS4-218ENST00000569440 KDM2AQ9Y2K7 1162 aa9.18□□□□□ -0.94
BBS4-218ENST00000569440 DPEP1P16444 411 aa9.17□□□□□ -0.94
BBS4-218ENST00000569440 LBX1P52954 281 aa9.17□□□□□ -0.94
BBS4-218ENST00000569440 WBP1LQ9NX94 342 aa9.17□□□□□ -0.94
BBS4-218ENST00000569440 RNF181Q9P0P0 153 aa9.17□□□□□ -0.94
BBS4-218ENST00000569440 NFAT5O94916 1531 aa9.16□□□□□ -0.94
BBS4-218ENST00000569440 TTC21AQ8NDW8 1320 aa9.16□□□□□ -0.94
BBS4-218ENST00000569440 MMP10P09238 476 aa9.16□□□□□ -0.94
BBS4-218ENST00000569440 SSFA2P28290 1259 aa9.16□□□□□ -0.94
BBS4-218ENST00000569440 DCAF11Q8TEB1 546 aa9.16□□□□□ -0.94
BBS4-218ENST00000569440 AIDAQ96BJ3 306 aa9.16□□□□□ -0.94
BBS4-218ENST00000569440 DCAF5Q96JK2 942 aa9.16□□□□□ -0.94
BBS4-218ENST00000569440 AK7Q96M32 723 aa9.16□□□□□ -0.94
BBS4-218ENST00000569440 CNTNAP1P78357 1384 aa9.15□□□□□ -0.94
BBS4-218ENST00000569440 ZC3H4Q9UPT8 1303 aaKnown RBP9.15□□□□□ -0.94
BBS4-218ENST00000569440 CCDC85CA6NKD9 419 aa9.15□□□□□ -0.94
BBS4-218ENST00000569440 PHF14O94880 888 aa9.15□□□□□ -0.94
BBS4-218ENST00000569440 LY75O60449 1722 aa9.14□□□□□ -0.95
BBS4-218ENST00000569440 GLTPD2A6NH11 291 aa9.14□□□□□ -0.95
BBS4-218ENST00000569440 POTECB2RU33 542 aa9.14□□□□□ -0.95
BBS4-218ENST00000569440 HSPA8P11142 646 aaKnown RBP9.14□□□□□ -0.95
BBS4-218ENST00000569440 ZCRB1Q8TBF4 217 aaKnown RBP9.14□□□□□ -0.95
BBS4-218ENST00000569440 PIK3C2AO00443 1686 aa9.13□□□□□ -0.95
BBS4-218ENST00000569440 PALLDQ8WX93 1383 aa9.13□□□□□ -0.95
BBS4-218ENST00000569440 PIM2Q9P1W9 311 aa9.13□□□□□ -0.95
BBS4-218ENST00000569440 NSD3Q9BZ95 1437 aa9.13□□□□□ -0.95
BBS4-218ENST00000569440 VEGFBP49765 207 aa9.12□□□□□ -0.95
BBS4-218ENST00000569440 PPARGC1BQ86YN6 1023 aaKnown RBP9.12□□□□□ -0.95
BBS4-218ENST00000569440 USP31Q70CQ4 1352 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms