RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 POLR3AO14802 1390 aaPredicted RBP12.88□□□□□ -0.35
CAPN3-219ENST00000569136 BRD4O60885 1362 aaPredicted RBP12.88□□□□□ -0.35
CAPN3-219ENST00000569136 SBNO2Q9Y2G9 1366 aa12.88□□□□□ -0.35
CAPN3-219ENST00000569136 AFF2P51816 1311 aa12.88□□□□□ -0.35
CAPN3-219ENST00000569136 ADGRB2O60241 1585 aa12.87□□□□□ -0.35
CAPN3-219ENST00000569136 CDCA8Q53HL2 280 aa12.87□□□□□ -0.35
CAPN3-219ENST00000569136 MARVELD3Q96A59 401 aa12.87□□□□□ -0.35
CAPN3-219ENST00000569136 LHX6Q9UPM6 363 aa12.87□□□□□ -0.35
CAPN3-219ENST00000569136 RALGAPBQ86X10 1494 aa12.86□□□□□ -0.35
CAPN3-219ENST00000569136 ATAD2Q6PL18 1390 aa12.86□□□□□ -0.35
CAPN3-219ENST00000569136 EMP3P54852 163 aa12.86□□□□□ -0.35
CAPN3-219ENST00000569136 ABTB2Q8N961 1025 aa12.86□□□□□ -0.35
CAPN3-219ENST00000569136 ANO8Q9HCE9 1232 aaPredicted RBP12.86□□□□□ -0.35
CAPN3-219ENST00000569136 USP21Q9UK80 565 aa12.86□□□□□ -0.35
CAPN3-219ENST00000569136 TRPC5Q9UL62 973 aaPredicted RBP12.86□□□□□ -0.35
CAPN3-219ENST00000569136 TNS3Q68CZ2 1445 aa12.86□□□□□ -0.35
CAPN3-219ENST00000569136 RBM6P78332 1123 aaKnown RBP12.85□□□□□ -0.35
CAPN3-219ENST00000569136 NLRP13Q86W25 1043 aa12.85□□□□□ -0.35
CAPN3-219ENST00000569136 ZNF454Q8N9F8 522 aa12.85□□□□□ -0.35
CAPN3-219ENST00000569136 CABLES1Q8TDN4 633 aa12.85□□□□□ -0.35
CAPN3-219ENST00000569136 TESK2Q96S53 571 aa12.85□□□□□ -0.35
CAPN3-219ENST00000569136 NHSL1Q5SYE7 1610 aa12.84□□□□□ -0.35
CAPN3-219ENST00000569136 TMF1P82094 1093 aa12.84□□□□□ -0.35
CAPN3-219ENST00000569136 UNC5CLQ8IV45 518 aa12.84□□□□□ -0.35
CAPN3-219ENST00000569136 TERF2IPQ9NYB0 399 aa12.84□□□□□ -0.35
CAPN3-219ENST00000569136 FMN2Q9NZ56 1722 aa12.84□□□□□ -0.35
CAPN3-219ENST00000569136 ERBB3P21860 1342 aa12.84□□□□□ -0.35
CAPN3-219ENST00000569136 LRP6O75581 1613 aa12.84□□□□□ -0.35
CAPN3-219ENST00000569136 PPIP5K1Q6PFW1 1433 aa12.83□□□□□ -0.36
CAPN3-219ENST00000569136 FAM83GA6ND36 823 aa12.83□□□□□ -0.36
CAPN3-219ENST00000569136 TMC1Q8TDI8 760 aa12.83□□□□□ -0.36
CAPN3-219ENST00000569136 ATP7BP35670 1465 aa12.83□□□□□ -0.36
CAPN3-219ENST00000569136 PTGER2P43116 358 aa12.82□□□□□ -0.36
CAPN3-219ENST00000569136 HDGFL2Q7Z4V5 671 aaPredicted RBP12.82□□□□□ -0.36
CAPN3-219ENST00000569136 KIF1AQ12756 1690 aa12.81□□□□□ -0.36
CAPN3-219ENST00000569136 SHPRHQ149N8 1683 aa12.81□□□□□ -0.36
CAPN3-219ENST00000569136 SLC12A5Q9H2X9 1139 aa12.81□□□□□ -0.36
CAPN3-219ENST00000569136 PHF14O94880 888 aa12.8□□□□□ -0.36
CAPN3-219ENST00000569136 EIF4G2P78344 907 aaKnown RBP eCLIP12.8□□□□□ -0.36
CAPN3-219ENST00000569136 TTC21AQ8NDW8 1320 aa12.8□□□□□ -0.36
CAPN3-219ENST00000569136 TRPM1Q7Z4N2 1603 aa12.8□□□□□ -0.36
CAPN3-219ENST00000569136 USP47Q96K76 1375 aa12.8□□□□□ -0.36
CAPN3-219ENST00000569136 GCP02774 474 aa12.79□□□□□ -0.36
CAPN3-219ENST00000569136 NUTM2GQ5VZR2 741 aa12.79□□□□□ -0.36
CAPN3-219ENST00000569136 GJD4Q96KN9 370 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-219ENST00000569136 PRDM11Q9NQV5 511 aa12.79□□□□□ -0.36
CAPN3-219ENST00000569136 PCDHGA10Q9Y5H3 936 aa12.79□□□□□ -0.36
CAPN3-219ENST00000569136 TTC21BQ7Z4L5 1316 aa12.79□□□□□ -0.36
CAPN3-219ENST00000569136 NINLQ9Y2I6 1382 aa12.79□□□□□ -0.36
CAPN3-219ENST00000569136 ARHGEF28Q8N1W1 1705 aaKnown RBP12.79□□□□□ -0.36
CAPN3-219ENST00000569136 FAM205CA6NFA0 338 aa12.78□□□□□ -0.36
CAPN3-219ENST00000569136 VPS72Q15906 364 aa12.78□□□□□ -0.36
CAPN3-219ENST00000569136 PPP4R3BQ5MIZ7 849 aa12.78□□□□□ -0.36
CAPN3-219ENST00000569136 VARS2Q5ST30 1063 aaKnown RBP12.78□□□□□ -0.36
CAPN3-219ENST00000569136 TYW1BQ6NUM6 668 aa12.78□□□□□ -0.36
CAPN3-219ENST00000569136 EPAS1Q99814 870 aa12.78□□□□□ -0.36
CAPN3-219ENST00000569136 PSDA5PKW4 1024 aaPredicted RBP12.77□□□□□ -0.37
CAPN3-219ENST00000569136 FOSBP53539 338 aa12.77□□□□□ -0.37
CAPN3-219ENST00000569136 RBM26Q5T8P6 1007 aaKnown RBP12.77□□□□□ -0.37
CAPN3-219ENST00000569136 KCNH5Q8NCM2 988 aa12.77□□□□□ -0.37
CAPN3-219ENST00000569136 MAP3K7O43318 606 aa12.76□□□□□ -0.37
CAPN3-219ENST00000569136 OSBPP22059 807 aa12.76□□□□□ -0.37
CAPN3-219ENST00000569136 ZC3H6P61129 1189 aaKnown RBP12.76□□□□□ -0.37
CAPN3-219ENST00000569136 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.76□□□□□ -0.37
CAPN3-219ENST00000569136 BTG4Q9NY30 223 aa12.76□□□□□ -0.37
CAPN3-219ENST00000569136 KTN1Q86UP2 1357 aaKnown RBP12.76□□□□□ -0.37
CAPN3-219ENST00000569136 USP6P35125 1406 aa12.76□□□□□ -0.37
CAPN3-219ENST00000569136 USP32Q8NFA0 1604 aa12.76□□□□□ -0.37
CAPN3-219ENST00000569136 EVA1CP58658 441 aa12.75□□□□□ -0.37
CAPN3-219ENST00000569136 CPSF1Q10570 1443 aaKnown RBP12.75□□□□□ -0.37
CAPN3-219ENST00000569136 BCL9LQ86UU0 1499 aa12.75□□□□□ -0.37
CAPN3-219ENST00000569136 ZDHHC16Q969W1 377 aa12.75□□□□□ -0.37
CAPN3-219ENST00000569136 SSH2Q76I76 1423 aa12.74□□□□□ -0.37
CAPN3-219ENST00000569136 USP19O94966 1318 aa12.74□□□□□ -0.37
CAPN3-219ENST00000569136 ONECUT3O60422 494 aaPredicted RBP12.74□□□□□ -0.37
CAPN3-219ENST00000569136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.74□□□□□ -0.37
CAPN3-219ENST00000569136 CCDC9Q9Y3X0 531 aaKnown RBP12.74□□□□□ -0.37
CAPN3-219ENST00000569136 COL22A1Q8NFW1 1626 aaPredicted RBP12.73□□□□□ -0.37
CAPN3-219ENST00000569136 ATRNO75882 1429 aa12.73□□□□□ -0.37
CAPN3-219ENST00000569136 FBXW7Q969H0 707 aa12.73□□□□□ -0.37
CAPN3-219ENST00000569136 SLIT2O94813 1529 aa12.72□□□□□ -0.37
CAPN3-219ENST00000569136 CDK12Q9NYV4 1490 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-219ENST00000569136 CPDO75976 1380 aa12.72□□□□□ -0.37
CAPN3-219ENST00000569136 HSPA5P11021 654 aaKnown RBP12.72□□□□□ -0.37
CAPN3-219ENST00000569136 LCE2DQ5TA82 110 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-219ENST00000569136 KIAA0232Q92628 1395 aa12.71□□□□□ -0.37
CAPN3-219ENST00000569136 EN1Q05925 392 aaPredicted RBP12.71□□□□□ -0.37
CAPN3-219ENST00000569136 CHRNA2Q15822 529 aa12.71□□□□□ -0.37
CAPN3-219ENST00000569136 ARHGEF25Q86VW2 580 aa12.71□□□□□ -0.37
CAPN3-219ENST00000569136 PRIM1P49642 420 aaKnown RBP12.7□□□□□ -0.38
CAPN3-219ENST00000569136 GPIHBP1Q8IV16 184 aa12.7□□□□□ -0.38
CAPN3-219ENST00000569136 ADAM33Q9BZ11 813 aa12.7□□□□□ -0.38
CAPN3-219ENST00000569136 RGPD8O14715 1765 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-219ENST00000569136 USP31Q70CQ4 1352 aa12.69□□□□□ -0.38
CAPN3-219ENST00000569136 NME9Q86XW9 330 aa12.69□□□□□ -0.38
CAPN3-219ENST00000569136 HS3ST6Q96QI5 342 aa12.69□□□□□ -0.38
CAPN3-219ENST00000569136 QRICH2Q9H0J4 1663 aa12.69□□□□□ -0.38
CAPN3-219ENST00000569136 EDC4Q6P2E9 1401 aaKnown RBP12.69□□□□□ -0.38
CAPN3-219ENST00000569136 AATKQ6ZMQ8 1374 aa12.69□□□□□ -0.38
CAPN3-219ENST00000569136 SPATA31A5Q5VU36 1347 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms