RNA–Protein interactions for RNA: ENST00000569108.5

SPIRE2-210, Transcript of spire type actin nucleation factor 2, humanhuman

TSL 1 (best)

Gene SPIRE2, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-210ENST00000569108 PHRF1Q9P1Y6 1649 aaKnown RBP23.2■■□□□ 1.3
SPIRE2-210ENST00000569108 NBPF6Q5VWK0 638 aa23.2■■□□□ 1.3
SPIRE2-210ENST00000569108 NBPF4Q96M43 638 aa23.2■■□□□ 1.3
SPIRE2-210ENST00000569108 SPATA31A3Q5VYP0 1347 aa23.19■■□□□ 1.3
SPIRE2-210ENST00000569108 CFAP44Q96MT7 982 aa23.19■■□□□ 1.3
SPIRE2-210ENST00000569108 BCL2L13Q9BXK5 485 aa23.19■■□□□ 1.3
SPIRE2-210ENST00000569108 MED1Q15648 1581 aaPredicted RBP23.19■■□□□ 1.3
SPIRE2-210ENST00000569108 USHBP1Q8N6Y0 703 aa23.19■■□□□ 1.3
SPIRE2-210ENST00000569108 TNS3Q68CZ2 1445 aa23.18■■□□□ 1.3
SPIRE2-210ENST00000569108 ZC3H6P61129 1189 aaKnown RBP23.18■■□□□ 1.3
SPIRE2-210ENST00000569108 MCM10Q7L590 875 aa23.18■■□□□ 1.3
SPIRE2-210ENST00000569108 MBIPQ9NS73 344 aa23.18■■□□□ 1.3
SPIRE2-210ENST00000569108 AXIN2Q9Y2T1 843 aa23.18■■□□□ 1.3
SPIRE2-210ENST00000569108 GAS2L2Q8NHY3 880 aa23.16■■□□□ 1.3
SPIRE2-210ENST00000569108 CABLES1Q8TDN4 633 aa23.16■■□□□ 1.3
SPIRE2-210ENST00000569108 PDE3AQ14432 1141 aa23.16■■□□□ 1.3
SPIRE2-210ENST00000569108 LRRC59Q96AG4 307 aaKnown RBP23.15■■□□□ 1.3
SPIRE2-210ENST00000569108 CANXP27824 592 aaKnown RBP23.14■■□□□ 1.3
SPIRE2-210ENST00000569108 NFKBIBQ15653 356 aa23.14■■□□□ 1.29
SPIRE2-210ENST00000569108 SSH1Q8WYL5 1049 aa23.14■■□□□ 1.29
SPIRE2-210ENST00000569108 ANKRD24Q8TF21 1146 aa23.13■■□□□ 1.29
SPIRE2-210ENST00000569108 SOS2Q07890 1332 aaPredicted RBP23.13■■□□□ 1.29
SPIRE2-210ENST00000569108 TSPYL6Q8N831 410 aa23.11■■□□□ 1.29
SPIRE2-210ENST00000569108 RTF1Q92541 710 aaKnown RBP23.11■■□□□ 1.29
SPIRE2-210ENST00000569108 SMC4Q9NTJ3 1288 aa23.11■■□□□ 1.29
SPIRE2-210ENST00000569108 CHL1O00533 1208 aa23.11■■□□□ 1.29
SPIRE2-210ENST00000569108 RRP9O43818 475 aaKnown RBP23.11■■□□□ 1.29
SPIRE2-210ENST00000569108 VAMP4O75379 141 aa23.11■■□□□ 1.29
SPIRE2-210ENST00000569108 PANK1Q8TE04 598 aa23.11■■□□□ 1.29
SPIRE2-210ENST00000569108 HSP90AA2PQ14568 343 aaPredicted RBP23.1■■□□□ 1.29
SPIRE2-210ENST00000569108 AEBP2Q6ZN18 517 aaPredicted RBP23.1■■□□□ 1.29
SPIRE2-210ENST00000569108 CRB1P82279 1406 aa23.1■■□□□ 1.29
SPIRE2-210ENST00000569108 HTATSF1O43719 755 aaKnown RBP23.09■■□□□ 1.29
SPIRE2-210ENST00000569108 TNNQ9UQP3 1299 aa23.09■■□□□ 1.29
SPIRE2-210ENST00000569108 GNAT3A8MTJ3 354 aa23.08■■□□□ 1.29
SPIRE2-210ENST00000569108 C8orf58Q8NAV2 365 aa23.08■■□□□ 1.29
SPIRE2-210ENST00000569108 ZNF428Q96B54 188 aa23.08■■□□□ 1.29
SPIRE2-210ENST00000569108 RGPD2P0DJD1 1756 aa23.08■■□□□ 1.29
SPIRE2-210ENST00000569108 ELL2O00472 640 aaPredicted RBP23.08■■□□□ 1.28
SPIRE2-210ENST00000569108 ALDH1L2Q3SY69 923 aa23.08■■□□□ 1.28
SPIRE2-210ENST00000569108 RLBP1P12271 317 aa23.07■■□□□ 1.28
SPIRE2-210ENST00000569108 ERBB3P21860 1342 aa23.07■■□□□ 1.28
SPIRE2-210ENST00000569108 COG6Q9Y2V7 657 aa23.07■■□□□ 1.28
SPIRE2-210ENST00000569108 NCAPD2Q15021 1401 aa23.06■■□□□ 1.28
SPIRE2-210ENST00000569108 ZKSCAN2Q63HK3 967 aa23.06■■□□□ 1.28
SPIRE2-210ENST00000569108 RRAGDQ9NQL2 400 aaPredicted RBP23.06■■□□□ 1.28
SPIRE2-210ENST00000569108 TWISTNBQ3B726 338 aaPredicted RBP23.05■■□□□ 1.28
SPIRE2-210ENST00000569108 CHRNA2Q15822 529 aa23.04■■□□□ 1.28
SPIRE2-210ENST00000569108 IL17REQ8NFR9 667 aa23.04■■□□□ 1.28
SPIRE2-210ENST00000569108 CLUAP1Q96AJ1 413 aa23.04■■□□□ 1.28
SPIRE2-210ENST00000569108 NOB1Q9ULX3 412 aaKnown RBP23.04■■□□□ 1.28
SPIRE2-210ENST00000569108 PDE4AP27815 886 aa23.04■■□□□ 1.28
SPIRE2-210ENST00000569108 MIS18AQ9NYP9 233 aa23.04■■□□□ 1.28
SPIRE2-210ENST00000569108 RGPD5Q99666 1765 aa23.04■■□□□ 1.28
SPIRE2-210ENST00000569108 MAP3K5Q99683 1374 aa23.04■■□□□ 1.28
SPIRE2-210ENST00000569108 KIAA0232Q92628 1395 aa23.03■■□□□ 1.28
SPIRE2-210ENST00000569108 CRYBG1Q9Y4K1 1723 aa23.03■■□□□ 1.28
SPIRE2-210ENST00000569108 CPDO75976 1380 aa23.03■■□□□ 1.28
SPIRE2-210ENST00000569108 BRPF1P55201 1214 aaPredicted RBP23.02■■□□□ 1.28
SPIRE2-210ENST00000569108 COL18A1P39060 1754 aa23.02■■□□□ 1.27
SPIRE2-210ENST00000569108 TCERG1O14776 1098 aaKnown RBP23.01■■□□□ 1.27
SPIRE2-210ENST00000569108 TRIM27P14373 513 aa23.01■■□□□ 1.27
SPIRE2-210ENST00000569108 KRT24Q2M2I5 525 aa23.01■■□□□ 1.27
SPIRE2-210ENST00000569108 BACH2Q9BYV9 841 aa23.01■■□□□ 1.27
SPIRE2-210ENST00000569108 ATF7IPQ6VMQ6 1270 aa23.01■■□□□ 1.27
SPIRE2-210ENST00000569108 PLEKHO1Q53GL0 409 aaPredicted RBP23■■□□□ 1.27
SPIRE2-210ENST00000569108 DZIP1LQ8IYY4 767 aaKnown RBP23■■□□□ 1.27
SPIRE2-210ENST00000569108 MRPL50Q8N5N7 158 aaKnown RBP23■■□□□ 1.27
SPIRE2-210ENST00000569108 TSPYL4Q9UJ04 414 aa23■■□□□ 1.27
SPIRE2-210ENST00000569108 KIF16BQ96L93 1317 aa22.99■■□□□ 1.27
SPIRE2-210ENST00000569108 RBM10P98175 930 aaKnown RBP22.99■■□□□ 1.27
SPIRE2-210ENST00000569108 AMOTQ4VCS5 1084 aa22.99■■□□□ 1.27
SPIRE2-210ENST00000569108 NLRP2Q9NX02 1062 aa22.99■■□□□ 1.27
SPIRE2-210ENST00000569108 IPO8O15397 1037 aaKnown RBP22.98■■□□□ 1.27
SPIRE2-210ENST00000569108 MS4A1P11836 297 aa22.98■■□□□ 1.27
SPIRE2-210ENST00000569108 FTSJ3Q8IY81 847 aaKnown RBP22.98■■□□□ 1.27
SPIRE2-210ENST00000569108 CAMTA1Q9Y6Y1 1673 aa22.98■■□□□ 1.27
SPIRE2-210ENST00000569108 LTBP4Q8N2S1 1624 aa22.98■■□□□ 1.27
SPIRE2-210ENST00000569108 HSP90AA1P07900 732 aaKnown RBP22.97■■□□□ 1.27
SPIRE2-210ENST00000569108 ZNF530Q6P9A1 599 aaPredicted RBP22.97■■□□□ 1.27
SPIRE2-210ENST00000569108 NHSL1Q5SYE7 1610 aa22.97■■□□□ 1.27
SPIRE2-210ENST00000569108 AAMPQ13685 434 aa22.96■■□□□ 1.27
SPIRE2-210ENST00000569108 MVPQ14764 893 aaKnown RBP22.96■■□□□ 1.27
SPIRE2-210ENST00000569108 AKAP4Q5JQC9 854 aa22.96■■□□□ 1.27
SPIRE2-210ENST00000569108 LGR6Q9HBX8 967 aa22.96■■□□□ 1.27
SPIRE2-210ENST00000569108 A0A0U1RQG5 324 aaPredicted RBP22.96■■□□□ 1.27
SPIRE2-210ENST00000569108 CSB-PGBD3P0DP91 1061 aa22.96■■□□□ 1.27
SPIRE2-210ENST00000569108 TAF7Q15545 349 aaPredicted RBP22.96■■□□□ 1.27
SPIRE2-210ENST00000569108 DDRGK1Q96HY6 314 aa22.96■■□□□ 1.27
SPIRE2-210ENST00000569108 ABCC6O95255 1503 aa22.95■■□□□ 1.26
SPIRE2-210ENST00000569108 PRDM11Q9NQV5 511 aa22.95■■□□□ 1.26
SPIRE2-210ENST00000569108 KDM2BQ8NHM5 1336 aa22.95■■□□□ 1.26
SPIRE2-210ENST00000569108 LRRC37A3O60309 1634 aa22.95■■□□□ 1.26
SPIRE2-210ENST00000569108 LMO7Q8WWI1 1683 aa22.95■■□□□ 1.26
SPIRE2-210ENST00000569108 CEMIPQ8WUJ3 1361 aa22.95■■□□□ 1.26
SPIRE2-210ENST00000569108 HAP1P54257 671 aaPredicted RBP22.93■■□□□ 1.26
SPIRE2-210ENST00000569108 ARHGAP45Q92619 1136 aa22.92■■□□□ 1.26
SPIRE2-210ENST00000569108 BABAM1Q9NWV8 329 aa22.92■■□□□ 1.26
SPIRE2-210ENST00000569108 FGD1P98174 961 aa22.92■■□□□ 1.26
SPIRE2-210ENST00000569108 RAPGEF4Q8WZA2 1011 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms