RNA–Protein interactions for RNA: ENST00000568656.5

NUP93-217, Transcript of nucleoporin 93, humanhuman

TSL 4

Gene NUP93, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-217ENST00000568656 AEBP1Q8IUX7 1158 aa12.7□□□□□ -0.38
NUP93-217ENST00000568656 SMG6Q86US8 1419 aaKnown RBP12.7□□□□□ -0.38
NUP93-217ENST00000568656 CYP27B1O15528 508 aa12.69□□□□□ -0.38
NUP93-217ENST00000568656 PRIM1P49642 420 aaKnown RBP12.69□□□□□ -0.38
NUP93-217ENST00000568656 R3HDM1Q15032 1099 aaKnown RBP12.69□□□□□ -0.38
NUP93-217ENST00000568656 RGPD1P0DJD0 1748 aa12.68□□□□□ -0.38
NUP93-217ENST00000568656 ANKRD26Q9UPS8 1709 aa12.68□□□□□ -0.38
NUP93-217ENST00000568656 SYTL4Q96C24 671 aaPredicted RBP12.68□□□□□ -0.38
NUP93-217ENST00000568656 IL13P35225 146 aa12.67□□□□□ -0.38
NUP93-217ENST00000568656 KCNQ4P56696 695 aa12.67□□□□□ -0.38
NUP93-217ENST00000568656 BCL9O00512 1426 aa12.67□□□□□ -0.38
NUP93-217ENST00000568656 PLSCR1O15162 318 aa12.66□□□□□ -0.38
NUP93-217ENST00000568656 SBF2Q86WG5 1849 aa12.66□□□□□ -0.38
NUP93-217ENST00000568656 IGSF1Q8N6C5 1336 aa12.65□□□□□ -0.38
NUP93-217ENST00000568656 NCAPD2Q15021 1401 aa12.65□□□□□ -0.38
NUP93-217ENST00000568656 DDX10Q13206 875 aaKnown RBP12.65□□□□□ -0.38
NUP93-217ENST00000568656 TXNRD1Q16881 649 aa12.65□□□□□ -0.38
NUP93-217ENST00000568656 ANO8Q9HCE9 1232 aaPredicted RBP12.65□□□□□ -0.38
NUP93-217ENST00000568656 HMOX1P09601 288 aa12.64□□□□□ -0.39
NUP93-217ENST00000568656 SULT6B1Q6IMI4 303 aa12.64□□□□□ -0.39
NUP93-217ENST00000568656 SHANK3Q9BYB0 1731 aa12.64□□□□□ -0.39
NUP93-217ENST00000568656 PDGFDQ9GZP0 370 aaPredicted RBP12.63□□□□□ -0.39
NUP93-217ENST00000568656 LRRC4BQ9NT99 713 aa12.63□□□□□ -0.39
NUP93-217ENST00000568656 NPC1L1Q9UHC9 1359 aa12.63□□□□□ -0.39
NUP93-217ENST00000568656 PPP2R1AP30153 589 aa12.62□□□□□ -0.39
NUP93-217ENST00000568656 SPG7Q9UQ90 795 aa12.62□□□□□ -0.39
NUP93-217ENST00000568656 PCDH11XQ9BZA7 1347 aa12.62□□□□□ -0.39
NUP93-217ENST00000568656 PCDH11YQ9BZA8 1340 aa12.62□□□□□ -0.39
NUP93-217ENST00000568656 DIAPH1O60610 1272 aaKnown RBP12.61□□□□□ -0.39
NUP93-217ENST00000568656 PHKG2P15735 406 aa12.61□□□□□ -0.39
NUP93-217ENST00000568656 MPRIPQ6WCQ1 1025 aa12.61□□□□□ -0.39
NUP93-217ENST00000568656 NKX1-1Q15270 411 aaPredicted RBP12.6□□□□□ -0.39
NUP93-217ENST00000568656 PARD3Q8TEW0 1356 aa12.59□□□□□ -0.39
NUP93-217ENST00000568656 NHSQ6T4R5 1651 aa12.59□□□□□ -0.39
NUP93-217ENST00000568656 U2SURPO15042 1029 aaKnown RBP12.59□□□□□ -0.39
NUP93-217ENST00000568656 NBPF14Q5TI25 921 aa12.59□□□□□ -0.39
NUP93-217ENST00000568656 ZNF530Q6P9A1 599 aaPredicted RBP12.59□□□□□ -0.39
NUP93-217ENST00000568656 IFNL2Q8IZJ0 200 aa12.59□□□□□ -0.39
NUP93-217ENST00000568656 PIGBQ92521 554 aa12.59□□□□□ -0.39
NUP93-217ENST00000568656 NUP188Q5SRE5 1749 aa12.59□□□□□ -0.39
NUP93-217ENST00000568656 RREB1Q92766 1687 aa12.58□□□□□ -0.4
NUP93-217ENST00000568656 ZNF827Q17R98 1081 aa12.58□□□□□ -0.4
NUP93-217ENST00000568656 PLEKHO1Q53GL0 409 aaPredicted RBP12.58□□□□□ -0.4
NUP93-217ENST00000568656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.58□□□□□ -0.4
NUP93-217ENST00000568656 COL3A1P02461 1466 aaPredicted RBP12.58□□□□□ -0.4
NUP93-217ENST00000568656 DOT1LQ8TEK3 1739 aa12.57□□□□□ -0.4
NUP93-217ENST00000568656 ASAP1Q9ULH1 1129 aa12.57□□□□□ -0.4
NUP93-217ENST00000568656 BTAF1O14981 1849 aa12.57□□□□□ -0.4
NUP93-217ENST00000568656 KDRP35968 1356 aa12.56□□□□□ -0.4
NUP93-217ENST00000568656 ZEB1P37275 1124 aaPredicted RBP12.56□□□□□ -0.4
NUP93-217ENST00000568656 SLC15A2Q16348 729 aa12.56□□□□□ -0.4
NUP93-217ENST00000568656 MTHFSDQ2M296 383 aaKnown RBP12.56□□□□□ -0.4
NUP93-217ENST00000568656 SMIM5Q71RC9 77 aa12.56□□□□□ -0.4
NUP93-217ENST00000568656 LGR6Q9HBX8 967 aa12.56□□□□□ -0.4
NUP93-217ENST00000568656 PKD1L3Q7Z443 1732 aa12.56□□□□□ -0.4
NUP93-217ENST00000568656 TOGARAM1Q9Y4F4 1720 aa12.55□□□□□ -0.4
NUP93-217ENST00000568656 PHACTR3Q96KR7 559 aa12.55□□□□□ -0.4
NUP93-217ENST00000568656 AMOTQ4VCS5 1084 aa12.54□□□□□ -0.4
NUP93-217ENST00000568656 ATG3Q9NT62 314 aa12.54□□□□□ -0.4
NUP93-217ENST00000568656 STK32BQ9NY57 414 aa12.54□□□□□ -0.4
NUP93-217ENST00000568656 CCNL1Q9UK58 526 aaPredicted RBP12.54□□□□□ -0.4
NUP93-217ENST00000568656 KDM6AO15550 1401 aaPredicted RBP12.54□□□□□ -0.4
NUP93-217ENST00000568656 KAT6BQ8WYB5 2073 aa12.53□□□□□ -0.4
NUP93-217ENST00000568656 ZBTB7AO95365 584 aa12.53□□□□□ -0.4
NUP93-217ENST00000568656 NFATC2IPQ8NCF5 419 aa12.53□□□□□ -0.4
NUP93-217ENST00000568656 AKT1S1Q96B36 256 aa12.53□□□□□ -0.4
NUP93-217ENST00000568656 TMOD3Q9NYL9 352 aa12.53□□□□□ -0.4
NUP93-217ENST00000568656 ATF5Q9Y2D1 282 aaPredicted RBP12.53□□□□□ -0.4
NUP93-217ENST00000568656 C1orf141Q5JVX7 400 aa12.52□□□□□ -0.41
NUP93-217ENST00000568656 AMIGO3Q86WK7 504 aa12.52□□□□□ -0.41
NUP93-217ENST00000568656 DCAF5Q96JK2 942 aa12.52□□□□□ -0.41
NUP93-217ENST00000568656 CFAP53Q96M91 514 aa12.52□□□□□ -0.41
NUP93-217ENST00000568656 SLC4A9Q96Q91 983 aa12.52□□□□□ -0.41
NUP93-217ENST00000568656 PALLDQ8WX93 1383 aa12.52□□□□□ -0.41
NUP93-217ENST00000568656 SRCAPQ6ZRS2 3230 aa12.51□□□□□ -0.41
NUP93-217ENST00000568656 U2AF1L5P0DN76 240 aaPredicted RBP12.51□□□□□ -0.41
NUP93-217ENST00000568656 PRKAR2BP31323 418 aa12.51□□□□□ -0.41
NUP93-217ENST00000568656 CABP4P57796 275 aa12.51□□□□□ -0.41
NUP93-217ENST00000568656 U2AF1Q01081 240 aaKnown RBP eCLIP12.51□□□□□ -0.41
NUP93-217ENST00000568656 SLC27A3Q5K4L6 730 aa12.51□□□□□ -0.41
NUP93-217ENST00000568656 RSPH6AQ9H0K4 717 aa12.51□□□□□ -0.41
NUP93-217ENST00000568656 ERVV-2B6SEH9 535 aa12.5□□□□□ -0.41
NUP93-217ENST00000568656 RNMTO43148 476 aaKnown RBP12.5□□□□□ -0.41
NUP93-217ENST00000568656 ITPK1Q13572 414 aa12.5□□□□□ -0.41
NUP93-217ENST00000568656 AKAP4Q5JQC9 854 aa12.5□□□□□ -0.41
NUP93-217ENST00000568656 RGPD3A6NKT7 1758 aaPredicted RBP12.5□□□□□ -0.41
NUP93-217ENST00000568656 RGPD4Q7Z3J3 1758 aa12.5□□□□□ -0.41
NUP93-217ENST00000568656 HSP90AB1P08238 724 aaKnown RBP12.49□□□□□ -0.41
NUP93-217ENST00000568656 SLC39A6Q13433 755 aa12.49□□□□□ -0.41
NUP93-217ENST00000568656 LINC00116Q8NCU8 138 aa12.49□□□□□ -0.41
NUP93-217ENST00000568656 RBM42Q9BTD8 480 aaKnown RBP12.49□□□□□ -0.41
NUP93-217ENST00000568656 TFCP2L1Q9NZI6 479 aa12.49□□□□□ -0.41
NUP93-217ENST00000568656 ITGB4P16144 1822 aa12.48□□□□□ -0.41
NUP93-217ENST00000568656 PAPPAQ13219 1627 aa12.48□□□□□ -0.41
NUP93-217ENST00000568656 PNPLA7Q6ZV29 1317 aa12.48□□□□□ -0.41
NUP93-217ENST00000568656 LOC102724428A0A0B4J2F2 783 aa12.48□□□□□ -0.41
NUP93-217ENST00000568656 PTCD1O75127 700 aaKnown RBP12.48□□□□□ -0.41
NUP93-217ENST00000568656 SIK1P57059 783 aa12.48□□□□□ -0.41
NUP93-217ENST00000568656 IL17REQ8NFR9 667 aa12.48□□□□□ -0.41
NUP93-217ENST00000568656 SMARCC1Q92922 1105 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms