RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 SDSP20132 328 aa22.68■■□□□ 1.22
PKD1-235ENST00000568591 CLCN1P35523 988 aa22.68■■□□□ 1.22
PKD1-235ENST00000568591 CHL1O00533 1208 aa22.67■■□□□ 1.22
PKD1-235ENST00000568591 FOXO3O43524 673 aa22.67■■□□□ 1.22
PKD1-235ENST00000568591 BAG4O95429 457 aaKnown RBP22.67■■□□□ 1.22
PKD1-235ENST00000568591 RTL1A6NKG5 1358 aa22.66■■□□□ 1.22
PKD1-235ENST00000568591 CHAMP1Q96JM3 812 aa22.66■■□□□ 1.22
PKD1-235ENST00000568591 F6X3S4 739 aa22.65■■□□□ 1.22
PKD1-235ENST00000568591 NAP1L5Q96NT1 182 aaPredicted RBP22.65■■□□□ 1.22
PKD1-235ENST00000568591 G2E3Q7L622 706 aa22.65■■□□□ 1.22
PKD1-235ENST00000568591 ZGPATQ8N5A5 531 aaKnown RBP22.64■■□□□ 1.22
PKD1-235ENST00000568591 SPATA31D1Q6ZQQ2 1576 aa22.64■■□□□ 1.22
PKD1-235ENST00000568591 SLC4A2P04920 1241 aa22.64■■□□□ 1.21
PKD1-235ENST00000568591 TSHZ3Q63HK5 1081 aa22.64■■□□□ 1.21
PKD1-235ENST00000568591 RABEP1Q15276 862 aa22.63■■□□□ 1.21
PKD1-235ENST00000568591 MON2Q7Z3U7 1717 aa22.63■■□□□ 1.21
PKD1-235ENST00000568591 ESPNB1AK53 854 aa22.63■■□□□ 1.21
PKD1-235ENST00000568591 DDX49Q9Y6V7 483 aaKnown RBP22.63■■□□□ 1.21
PKD1-235ENST00000568591 SKOR2Q2VWA4 1001 aaPredicted RBP22.62■■□□□ 1.21
PKD1-235ENST00000568591 MCTP1Q6DN14 999 aa22.62■■□□□ 1.21
PKD1-235ENST00000568591 SLC4A10Q6U841 1118 aa22.62■■□□□ 1.21
PKD1-235ENST00000568591 TSPOAP1O95153 1857 aa22.62■■□□□ 1.21
PKD1-235ENST00000568591 KIF24Q5T7B8 1368 aa22.62■■□□□ 1.21
PKD1-235ENST00000568591 C3P01024 1663 aa22.62■■□□□ 1.21
PKD1-235ENST00000568591 ROBO2Q9HCK4 1378 aa22.62■■□□□ 1.21
PKD1-235ENST00000568591 TTC21BQ7Z4L5 1316 aa22.61■■□□□ 1.21
PKD1-235ENST00000568591 RPAP2Q8IXW5 612 aaPredicted RBP22.61■■□□□ 1.21
PKD1-235ENST00000568591 ACEP12821 1306 aa22.6■■□□□ 1.21
PKD1-235ENST00000568591 ISY1Q9ULR0 285 aaKnown RBP22.6■■□□□ 1.21
PKD1-235ENST00000568591 REREQ9P2R6 1566 aa22.59■■□□□ 1.21
PKD1-235ENST00000568591 CLEC17AQ6ZS10 378 aa22.58■■□□□ 1.21
PKD1-235ENST00000568591 KLHL40Q2TBA0 621 aa22.58■■□□□ 1.2
PKD1-235ENST00000568591 NCLP19338 710 aaKnown RBP22.57■■□□□ 1.2
PKD1-235ENST00000568591 CRB1P82279 1406 aa22.57■■□□□ 1.2
PKD1-235ENST00000568591 CYP2E1P05181 493 aaPredicted RBP22.57■■□□□ 1.2
PKD1-235ENST00000568591 TRIM44Q96DX7 344 aaPredicted RBP22.57■■□□□ 1.2
PKD1-235ENST00000568591 EXOC6BQ9Y2D4 811 aa22.57■■□□□ 1.2
PKD1-235ENST00000568591 MAP3K19Q56UN5 1328 aa22.57■■□□□ 1.2
PKD1-235ENST00000568591 GOLGA6L22H0YM25 854 aa22.56■■□□□ 1.2
PKD1-235ENST00000568591 NRKQ7Z2Y5 1582 aa22.56■■□□□ 1.2
PKD1-235ENST00000568591 PEAK1Q9H792 1746 aa22.56■■□□□ 1.2
PKD1-235ENST00000568591 AKAP12Q02952 1782 aa22.56■■□□□ 1.2
PKD1-235ENST00000568591 MTHFSDQ2M296 383 aaKnown RBP22.56■■□□□ 1.2
PKD1-235ENST00000568591 CAVIN1Q6NZI2 390 aaKnown RBP22.56■■□□□ 1.2
PKD1-235ENST00000568591 FOXD4L5Q5VV16 416 aaPredicted RBP22.55■■□□□ 1.2
PKD1-235ENST00000568591 FOXD4L4Q8WXT5 416 aaPredicted RBP22.55■■□□□ 1.2
PKD1-235ENST00000568591 ZDHHC9Q9Y397 364 aa22.55■■□□□ 1.2
PKD1-235ENST00000568591 NASPP49321 788 aaPredicted RBP22.55■■□□□ 1.2
PKD1-235ENST00000568591 NECTIN2Q92692 538 aa22.55■■□□□ 1.2
PKD1-235ENST00000568591 PTPRCP08575 1304 aa22.55■■□□□ 1.2
PKD1-235ENST00000568591 KIAA0232Q92628 1395 aa22.55■■□□□ 1.2
PKD1-235ENST00000568591 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.54■■□□□ 1.2
PKD1-235ENST00000568591 LMBRD1Q9NUN5 540 aa22.54■■□□□ 1.2
PKD1-235ENST00000568591 ITSN1Q15811 1721 aa22.54■■□□□ 1.2
PKD1-235ENST00000568591 OVOS2A0A0J9YW53 1432 aa22.54■■□□□ 1.2
PKD1-235ENST00000568591 OVOS2Q6IE36 1432 aa22.54■■□□□ 1.2
PKD1-235ENST00000568591 RIMS1Q86UR5 1692 aaKnown RBP22.54■■□□□ 1.2
PKD1-235ENST00000568591 TSPYL4Q9UJ04 414 aa22.53■■□□□ 1.2
PKD1-235ENST00000568591 AGLP35573 1532 aa22.53■■□□□ 1.2
PKD1-235ENST00000568591 PDE1AP54750 535 aa22.53■■□□□ 1.2
PKD1-235ENST00000568591 RBM27Q9P2N5 1060 aaKnown RBP22.53■■□□□ 1.2
PKD1-235ENST00000568591 PPP6R1Q9UPN7 881 aa22.53■■□□□ 1.2
PKD1-235ENST00000568591 TECPR2O15040 1411 aa22.52■■□□□ 1.2
PKD1-235ENST00000568591 PTMSP20962 102 aa22.52■■□□□ 1.2
PKD1-235ENST00000568591 PRPF40AO75400 957 aaKnown RBP22.51■■□□□ 1.19
PKD1-235ENST00000568591 NUCB2P80303 420 aa22.51■■□□□ 1.19
PKD1-235ENST00000568591 CASC1Q6TDU7 716 aa22.51■■□□□ 1.19
PKD1-235ENST00000568591 ERC2O15083 957 aa22.5■■□□□ 1.19
PKD1-235ENST00000568591 ZSCAN23Q3MJ62 389 aa22.5■■□□□ 1.19
PKD1-235ENST00000568591 ST18O60284 1047 aa22.5■■□□□ 1.19
PKD1-235ENST00000568591 NOL8Q76FK4 1167 aaKnown RBP22.49■■□□□ 1.19
PKD1-235ENST00000568591 GPT2Q8TD30 523 aa22.49■■□□□ 1.19
PKD1-235ENST00000568591 NSFL1CQ9UNZ2 370 aaKnown RBP22.49■■□□□ 1.19
PKD1-235ENST00000568591 PNMA6EA0A0J9YXQ4 647 aa22.49■■□□□ 1.19
PKD1-235ENST00000568591 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.48■■□□□ 1.19
PKD1-235ENST00000568591 USP6P35125 1406 aa22.48■■□□□ 1.19
PKD1-235ENST00000568591 REC8O95072 547 aa22.48■■□□□ 1.19
PKD1-235ENST00000568591 HAP1P54257 671 aaPredicted RBP22.48■■□□□ 1.19
PKD1-235ENST00000568591 SIRT1Q96EB6 747 aa22.48■■□□□ 1.19
PKD1-235ENST00000568591 PKNOX2Q96KN3 472 aa22.48■■□□□ 1.19
PKD1-235ENST00000568591 PALD1Q9ULE6 856 aa22.48■■□□□ 1.19
PKD1-235ENST00000568591 DIP2BQ9P265 1576 aa22.48■■□□□ 1.19
PKD1-235ENST00000568591 SLC26A8Q96RN1 970 aa22.48■■□□□ 1.19
PKD1-235ENST00000568591 ESF1Q9H501 851 aaKnown RBP22.47■■□□□ 1.19
PKD1-235ENST00000568591 LTKP29376 864 aa22.47■■□□□ 1.19
PKD1-235ENST00000568591 NEK4P51957 841 aa22.47■■□□□ 1.19
PKD1-235ENST00000568591 RTF1Q92541 710 aaKnown RBP22.47■■□□□ 1.19
PKD1-235ENST00000568591 RBSNQ9H1K0 784 aa22.47■■□□□ 1.19
PKD1-235ENST00000568591 HMMRO75330 724 aa22.46■■□□□ 1.19
PKD1-235ENST00000568591 PRIM1P49642 420 aaKnown RBP22.46■■□□□ 1.19
PKD1-235ENST00000568591 PPP1R9BQ96SB3 815 aa22.46■■□□□ 1.19
PKD1-235ENST00000568591 ADAMTS13Q76LX8 1427 aa22.45■■□□□ 1.19
PKD1-235ENST00000568591 PLEKHG3A1L390 1219 aa22.45■■□□□ 1.18
PKD1-235ENST00000568591 CCDC173Q0VFZ6 552 aa22.45■■□□□ 1.18
PKD1-235ENST00000568591 EYA1Q99502 592 aa22.45■■□□□ 1.18
PKD1-235ENST00000568591 RGPD1P0DJD0 1748 aa22.45■■□□□ 1.18
PKD1-235ENST00000568591 IBTKQ9P2D0 1353 aaPredicted RBP22.44■■□□□ 1.18
PKD1-235ENST00000568591 TMEM2Q9UHN6 1383 aa22.44■■□□□ 1.18
PKD1-235ENST00000568591 ZNF445P59923 1031 aa22.44■■□□□ 1.18
PKD1-235ENST00000568591 TMX3Q96JJ7 454 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 844.4 ms