RNA–Protein interactions for RNA: ENST00000568359.1

SNX29-206, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-206ENST00000568359 ARHGEF25Q86VW2 580 aa7.66□□□□□ -1.18
SNX29-206ENST00000568359 ZNF692Q9BU19 519 aaPredicted RBP7.66□□□□□ -1.18
SNX29-206ENST00000568359 NLRP2Q9NX02 1062 aa7.66□□□□□ -1.18
SNX29-206ENST00000568359 TTC21BQ7Z4L5 1316 aa7.66□□□□□ -1.18
SNX29-206ENST00000568359 ROCK2O75116 1388 aaKnown RBP7.66□□□□□ -1.18
SNX29-206ENST00000568359 QSER1Q2KHR3 1735 aa7.66□□□□□ -1.18
SNX29-206ENST00000568359 GIGYF1O75420 1035 aaPredicted RBP7.65□□□□□ -1.18
SNX29-206ENST00000568359 POLD1P28340 1107 aa7.65□□□□□ -1.18
SNX29-206ENST00000568359 HOXD11P31277 338 aaPredicted RBP7.65□□□□□ -1.18
SNX29-206ENST00000568359 BRPF1P55201 1214 aaPredicted RBP7.65□□□□□ -1.18
SNX29-206ENST00000568359 C1QTNF8P60827 252 aa7.65□□□□□ -1.18
SNX29-206ENST00000568359 USP54Q70EL1 1684 aa7.65□□□□□ -1.18
SNX29-206ENST00000568359 DOT1LQ8TEK3 1739 aa7.65□□□□□ -1.18
SNX29-206ENST00000568359 TUBGCP6Q96RT7 1819 aa7.65□□□□□ -1.18
SNX29-206ENST00000568359 ERBB3P21860 1342 aa7.64□□□□□ -1.19
SNX29-206ENST00000568359 IL2RBP14784 551 aa7.64□□□□□ -1.19
SNX29-206ENST00000568359 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.64□□□□□ -1.19
SNX29-206ENST00000568359 UTRNP46939 3433 aa7.64□□□□□ -1.19
SNX29-206ENST00000568359 MAP3K5Q99683 1374 aa7.63□□□□□ -1.19
SNX29-206ENST00000568359 SYTL4Q96C24 671 aaPredicted RBP7.63□□□□□ -1.19
SNX29-206ENST00000568359 TFCP2L1Q9NZI6 479 aa7.63□□□□□ -1.19
SNX29-206ENST00000568359 ZNF827Q17R98 1081 aa7.62□□□□□ -1.19
SNX29-206ENST00000568359 HDGFL2Q7Z4V5 671 aaPredicted RBP7.62□□□□□ -1.19
SNX29-206ENST00000568359 TMC1Q8TDI8 760 aa7.62□□□□□ -1.19
SNX29-206ENST00000568359 ANKRD24Q8TF21 1146 aa7.62□□□□□ -1.19
SNX29-206ENST00000568359 SGIP1Q9BQI5 828 aa7.62□□□□□ -1.19
SNX29-206ENST00000568359 SLC27A3Q5K4L6 730 aa7.61□□□□□ -1.19
SNX29-206ENST00000568359 DDX54Q8TDD1 881 aaKnown RBP7.61□□□□□ -1.19
SNX29-206ENST00000568359 L3MBTL2Q969R5 705 aa7.61□□□□□ -1.19
SNX29-206ENST00000568359 LY75O60449 1722 aa7.61□□□□□ -1.19
SNX29-206ENST00000568359 NME9Q86XW9 330 aa7.6□□□□□ -1.19
SNX29-206ENST00000568359 SLC16A10Q8TF71 515 aa7.6□□□□□ -1.19
SNX29-206ENST00000568359 LTV1Q96GA3 475 aaPredicted RBP7.6□□□□□ -1.19
SNX29-206ENST00000568359 COL24A1Q17RW2 1714 aa7.6□□□□□ -1.19
SNX29-206ENST00000568359 SHANK3Q9BYB0 1731 aa7.6□□□□□ -1.19
SNX29-206ENST00000568359 C5P01031 1676 aa7.6□□□□□ -1.19
SNX29-206ENST00000568359 EDC4Q6P2E9 1401 aaKnown RBP7.6□□□□□ -1.19
SNX29-206ENST00000568359 USP31Q70CQ4 1352 aa7.59□□□□□ -1.19
SNX29-206ENST00000568359 NEUROD1Q13562 356 aa7.59□□□□□ -1.19
SNX29-206ENST00000568359 LRRC4BQ9NT99 713 aa7.59□□□□□ -1.19
SNX29-206ENST00000568359 TERF2IPQ9NYB0 399 aa7.59□□□□□ -1.19
SNX29-206ENST00000568359 RGPD2P0DJD1 1756 aa7.59□□□□□ -1.2
SNX29-206ENST00000568359 PNPLA7Q6ZV29 1317 aa7.58□□□□□ -1.2
SNX29-206ENST00000568359 GRIN3BO60391 1043 aa7.58□□□□□ -1.2
SNX29-206ENST00000568359 SPOCK2Q92563 424 aa7.58□□□□□ -1.2
SNX29-206ENST00000568359 AKT1S1Q96B36 256 aa7.58□□□□□ -1.2
SNX29-206ENST00000568359 CCNL1Q9UK58 526 aaPredicted RBP7.58□□□□□ -1.2
SNX29-206ENST00000568359 SMG6Q86US8 1419 aaKnown RBP7.58□□□□□ -1.2
SNX29-206ENST00000568359 ANKRD36BQ8N2N9 1353 aa7.58□□□□□ -1.2
SNX29-206ENST00000568359 USP47Q96K76 1375 aa7.58□□□□□ -1.2
SNX29-206ENST00000568359 SBNO2Q9Y2G9 1366 aa7.58□□□□□ -1.2
SNX29-206ENST00000568359 CD163L1Q9NR16 1453 aa7.57□□□□□ -1.2
SNX29-206ENST00000568359 AMPHP49418 695 aa7.57□□□□□ -1.2
SNX29-206ENST00000568359 PRIM1P49642 420 aaKnown RBP7.57□□□□□ -1.2
SNX29-206ENST00000568359 KCNQ4P56696 695 aa7.57□□□□□ -1.2
SNX29-206ENST00000568359 NLGN2Q8NFZ4 835 aa7.57□□□□□ -1.2
SNX29-206ENST00000568359 CARD11Q9BXL7 1154 aa7.57□□□□□ -1.2
SNX29-206ENST00000568359 A0A1W2PP64 1363 aa7.57□□□□□ -1.2
SNX29-206ENST00000568359 MSL1Q68DK7 614 aa7.56□□□□□ -1.2
SNX29-206ENST00000568359 COG3Q96JB2 828 aa7.56□□□□□ -1.2
SNX29-206ENST00000568359 GOLGB1Q14789 3259 aaKnown RBP7.55□□□□□ -1.2
SNX29-206ENST00000568359 TAF1LQ8IZX4 1826 aa7.55□□□□□ -1.2
SNX29-206ENST00000568359 KIF20BQ96Q89 1820 aa7.55□□□□□ -1.2
SNX29-206ENST00000568359 ATP10DQ9P241 1426 aa7.55□□□□□ -1.2
SNX29-206ENST00000568359 HMGB2P26583 209 aaKnown RBP7.55□□□□□ -1.2
SNX29-206ENST00000568359 IFFO2Q5TF58 517 aa7.55□□□□□ -1.2
SNX29-206ENST00000568359 ZNF526Q8TF50 670 aaPredicted RBP7.55□□□□□ -1.2
SNX29-206ENST00000568359 IP6K1Q92551 441 aa7.55□□□□□ -1.2
SNX29-206ENST00000568359 SIN3AQ96ST3 1273 aa7.55□□□□□ -1.2
SNX29-206ENST00000568359 GPBP1L1Q9HC44 474 aaPredicted RBP7.55□□□□□ -1.2
SNX29-206ENST00000568359 MEGF6O75095 1541 aa7.55□□□□□ -1.2
SNX29-206ENST00000568359 YBX3P16989 372 aaKnown RBP eCLIP7.54□□□□□ -1.2
SNX29-206ENST00000568359 ZCRB1Q8TBF4 217 aaKnown RBP7.54□□□□□ -1.2
SNX29-206ENST00000568359 RAPGEF4Q8WZA2 1011 aa7.54□□□□□ -1.2
SNX29-206ENST00000568359 SLC12A5Q9H2X9 1139 aa7.54□□□□□ -1.2
SNX29-206ENST00000568359 RTL1A6NKG5 1358 aa7.54□□□□□ -1.2
SNX29-206ENST00000568359 NSD2O96028 1365 aa7.54□□□□□ -1.2
SNX29-206ENST00000568359 C4BP0C0L5 1744 aa7.53□□□□□ -1.2
SNX29-206ENST00000568359 HOXC9P31274 260 aa7.53□□□□□ -1.2
SNX29-206ENST00000568359 AK7Q96M32 723 aa7.53□□□□□ -1.2
SNX29-206ENST00000568359 TONSLQ96HA7 1378 aa7.53□□□□□ -1.2
SNX29-206ENST00000568359 CGNL1Q0VF96 1302 aa7.52□□□□□ -1.2
SNX29-206ENST00000568359 MAP3K19Q56UN5 1328 aa7.52□□□□□ -1.2
SNX29-206ENST00000568359 PCDH11XQ9BZA7 1347 aa7.52□□□□□ -1.2
SNX29-206ENST00000568359 PCDH11YQ9BZA8 1340 aa7.52□□□□□ -1.2
SNX29-206ENST00000568359 NSD3Q9BZ95 1437 aa7.52□□□□□ -1.2
SNX29-206ENST00000568359 ITGB4P16144 1822 aa7.52□□□□□ -1.2
SNX29-206ENST00000568359 PALLDQ8WX93 1383 aa7.52□□□□□ -1.21
SNX29-206ENST00000568359 TATP17735 454 aaPredicted RBP7.52□□□□□ -1.21
SNX29-206ENST00000568359 MKRN4PQ13434 485 aaPredicted RBP7.52□□□□□ -1.21
SNX29-206ENST00000568359 COL23A1Q86Y22 540 aaPredicted RBP7.52□□□□□ -1.21
SNX29-206ENST00000568359 USHBP1Q8N6Y0 703 aa7.52□□□□□ -1.21
SNX29-206ENST00000568359 FLAD1Q8NFF5 587 aa7.52□□□□□ -1.21
SNX29-206ENST00000568359 CD2APQ9Y5K6 639 aa7.52□□□□□ -1.21
SNX29-206ENST00000568359 UBR3Q6ZT12 1888 aa7.51□□□□□ -1.21
SNX29-206ENST00000568359 PHF14O94880 888 aa7.51□□□□□ -1.21
SNX29-206ENST00000568359 MPRIPQ6WCQ1 1025 aa7.51□□□□□ -1.21
SNX29-206ENST00000568359 WWC3Q9ULE0 1092 aa7.51□□□□□ -1.21
SNX29-206ENST00000568359 TOGARAM1Q9Y4F4 1720 aa7.51□□□□□ -1.21
SNX29-206ENST00000568359 PKD1L3Q7Z443 1732 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms