RNA–Protein interactions for RNA: ENST00000568176.5

EDC3-214, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 1,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-214ENST00000568176 RAPGEF4Q8WZA2 1011 aa24.35■■□□□ 1.49
EDC3-214ENST00000568176 GAS2L2Q8NHY3 880 aa24.34■■□□□ 1.49
EDC3-214ENST00000568176 PKD1L3Q7Z443 1732 aa24.33■■□□□ 1.49
EDC3-214ENST00000568176 PARP4Q9UKK3 1724 aaKnown RBP24.33■■□□□ 1.48
EDC3-214ENST00000568176 SLFN5Q08AF3 891 aa24.33■■□□□ 1.48
EDC3-214ENST00000568176 WDR63Q8IWG1 891 aa24.33■■□□□ 1.48
EDC3-214ENST00000568176 TATP17735 454 aaPredicted RBP24.32■■□□□ 1.48
EDC3-214ENST00000568176 PLEKHO1Q53GL0 409 aaPredicted RBP24.32■■□□□ 1.48
EDC3-214ENST00000568176 MCM10Q7L590 875 aa24.32■■□□□ 1.48
EDC3-214ENST00000568176 FNBP4Q8N3X1 1017 aaPredicted RBP24.32■■□□□ 1.48
EDC3-214ENST00000568176 FBXO41Q8TF61 875 aa24.31■■□□□ 1.48
EDC3-214ENST00000568176 OVOS2A0A0G2JMS6 1433 aa24.31■■□□□ 1.48
EDC3-214ENST00000568176 ZNF530Q6P9A1 599 aaPredicted RBP24.31■■□□□ 1.48
EDC3-214ENST00000568176 TRMT2AQ8IZ69 625 aaKnown RBP24.31■■□□□ 1.48
EDC3-214ENST00000568176 AMOTQ4VCS5 1084 aa24.3■■□□□ 1.48
EDC3-214ENST00000568176 DUSP27Q5VZP5 1158 aa24.3■■□□□ 1.48
EDC3-214ENST00000568176 UNC5CLQ8IV45 518 aa24.3■■□□□ 1.48
EDC3-214ENST00000568176 WNK3Q9BYP7 1800 aa24.3■■□□□ 1.48
EDC3-214ENST00000568176 MAP3K5Q99683 1374 aa24.29■■□□□ 1.48
EDC3-214ENST00000568176 MEX3CQ5U5Q3 659 aaKnown RBP24.29■■□□□ 1.48
EDC3-214ENST00000568176 GTF3C3Q9Y5Q9 886 aa24.29■■□□□ 1.48
EDC3-214ENST00000568176 SHANK3Q9BYB0 1731 aa24.29■■□□□ 1.48
EDC3-214ENST00000568176 VIRMAQ69YN4 1812 aaKnown RBP24.29■■□□□ 1.48
EDC3-214ENST00000568176 GNAT3A8MTJ3 354 aa24.28■■□□□ 1.48
EDC3-214ENST00000568176 IL2RBP14784 551 aa24.28■■□□□ 1.48
EDC3-214ENST00000568176 SPATA31A1Q5TZJ5 1347 aa24.28■■□□□ 1.48
EDC3-214ENST00000568176 DISP2A7MBM2 1401 aa24.28■■□□□ 1.48
EDC3-214ENST00000568176 LMOD3Q0VAK6 560 aa24.28■■□□□ 1.48
EDC3-214ENST00000568176 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.27■■□□□ 1.48
EDC3-214ENST00000568176 SPATA31A5Q5VU36 1347 aa24.27■■□□□ 1.48
EDC3-214ENST00000568176 SPATA31A7Q8IWB4 1347 aa24.27■■□□□ 1.48
EDC3-214ENST00000568176 E9PSI1 815 aa24.26■■□□□ 1.47
EDC3-214ENST00000568176 IL17REQ8NFR9 667 aa24.26■■□□□ 1.47
EDC3-214ENST00000568176 LRRC37A3O60309 1634 aa24.26■■□□□ 1.47
EDC3-214ENST00000568176 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.26■■□□□ 1.472e-7■■□□□ 14.4
EDC3-214ENST00000568176 USP21Q9UK80 565 aa24.26■■□□□ 1.47
EDC3-214ENST00000568176 CYP27B1O15528 508 aa24.25■■□□□ 1.47
EDC3-214ENST00000568176 AKAP4Q5JQC9 854 aa24.25■■□□□ 1.47
EDC3-214ENST00000568176 AFF2P51816 1311 aa24.25■■□□□ 1.47
EDC3-214ENST00000568176 LGR6Q9HBX8 967 aa24.24■■□□□ 1.47
EDC3-214ENST00000568176 SPG7Q9UQ90 795 aa24.24■■□□□ 1.47
EDC3-214ENST00000568176 PLEKHG2Q9H7P9 1386 aa24.24■■□□□ 1.47
EDC3-214ENST00000568176 TSR2Q969E8 191 aaKnown RBP24.24■■□□□ 1.47
EDC3-214ENST00000568176 IL16Q14005 1332 aa24.24■■□□□ 1.47
EDC3-214ENST00000568176 HTATSF1O43719 755 aaKnown RBP24.23■■□□□ 1.47
EDC3-214ENST00000568176 VPS72Q15906 364 aa24.23■■□□□ 1.47
EDC3-214ENST00000568176 MPRIPQ6WCQ1 1025 aa24.23■■□□□ 1.47
EDC3-214ENST00000568176 ZCRB1Q8TBF4 217 aaKnown RBP24.23■■□□□ 1.47
EDC3-214ENST00000568176 RTF1Q92541 710 aaKnown RBP24.23■■□□□ 1.47
EDC3-214ENST00000568176 CCDC9Q9Y3X0 531 aaKnown RBP24.23■■□□□ 1.47
EDC3-214ENST00000568176 PHKG2P15735 406 aa24.22■■□□□ 1.47
EDC3-214ENST00000568176 ADAMTS7Q9UKP4 1686 aa24.22■■□□□ 1.47
EDC3-214ENST00000568176 ZNF853P0CG23 659 aa24.21■■□□□ 1.47
EDC3-214ENST00000568176 C1orf141Q5JVX7 400 aa24.21■■□□□ 1.47
EDC3-214ENST00000568176 LAS1LQ9Y4W2 734 aaKnown RBP24.21■■□□□ 1.47
EDC3-214ENST00000568176 CEMIPQ8WUJ3 1361 aa24.21■■□□□ 1.47
EDC3-214ENST00000568176 FANCIQ9NVI1 1328 aa24.21■■□□□ 1.47
EDC3-214ENST00000568176 KDM6AO15550 1401 aaPredicted RBP24.2■■□□□ 1.46
EDC3-214ENST00000568176 SCN11AQ9UI33 1791 aa24.19■■□□□ 1.46
EDC3-214ENST00000568176 RNMTO43148 476 aaKnown RBP24.18■■□□□ 1.46
EDC3-214ENST00000568176 IFNL2Q8IZJ0 200 aa24.18■■□□□ 1.46
EDC3-214ENST00000568176 CFAP44Q96MT7 982 aa24.18■■□□□ 1.46
EDC3-214ENST00000568176 IFT57Q9NWB7 429 aa24.18■■□□□ 1.46
EDC3-214ENST00000568176 THRAP3Q9Y2W1 955 aaKnown RBP24.18■■□□□ 1.46
EDC3-214ENST00000568176 CALD1Q05682 793 aaKnown RBP24.17■■□□□ 1.46
EDC3-214ENST00000568176 MBIPQ9NS73 344 aa24.17■■□□□ 1.46
EDC3-214ENST00000568176 MIS18AQ9NYP9 233 aa24.17■■□□□ 1.46
EDC3-214ENST00000568176 PCDH11XQ9BZA7 1347 aa24.17■■□□□ 1.46
EDC3-214ENST00000568176 PCDH11YQ9BZA8 1340 aa24.17■■□□□ 1.46
EDC3-214ENST00000568176 GLI3P10071 1580 aa24.17■■□□□ 1.46
EDC3-214ENST00000568176 MYH16Q9H6N6 1097 aa24.17■■□□□ 1.46
EDC3-214ENST00000568176 BARGINQ6ZT62 677 aa24.16■■□□□ 1.46
EDC3-214ENST00000568176 DDX54Q8TDD1 881 aaKnown RBP24.16■■□□□ 1.46
EDC3-214ENST00000568176 ATRNO75882 1429 aa24.15■■□□□ 1.46
EDC3-214ENST00000568176 SIPA1L3O60292 1781 aaPredicted RBP24.15■■□□□ 1.46
EDC3-214ENST00000568176 GNAI1P63096 354 aa24.15■■□□□ 1.46
EDC3-214ENST00000568176 CHL1O00533 1208 aa24.14■■□□□ 1.46
EDC3-214ENST00000568176 FAM98CQ17RN3 349 aaKnown RBP24.14■■□□□ 1.46
EDC3-214ENST00000568176 TNS2Q63HR2 1409 aa24.13■■□□□ 1.45
EDC3-214ENST00000568176 EXOSC9Q06265 439 aaKnown RBP24.12■■□□□ 1.45
EDC3-214ENST00000568176 TOGARAM1Q9Y4F4 1720 aa24.11■■□□□ 1.45
EDC3-214ENST00000568176 CDCA7Q9BWT1 371 aaPredicted RBP24.11■■□□□ 1.45
EDC3-214ENST00000568176 EXOC5O00471 708 aa24.1■■□□□ 1.45
EDC3-214ENST00000568176 NKX1-1Q15270 411 aaPredicted RBP24.1■■□□□ 1.45
EDC3-214ENST00000568176 TAF7Q15545 349 aaPredicted RBP24.1■■□□□ 1.45
EDC3-214ENST00000568176 DCAF5Q96JK2 942 aa24.1■■□□□ 1.45
EDC3-214ENST00000568176 GJD4Q96KN9 370 aaPredicted RBP24.1■■□□□ 1.45
EDC3-214ENST00000568176 THSD7AQ9UPZ6 1657 aa24.1■■□□□ 1.45
EDC3-214ENST00000568176 SUPT16HQ9Y5B9 1047 aaKnown RBP24.1■■□□□ 1.45
EDC3-214ENST00000568176 RCAN3Q9UKA8 241 aa24.09■■□□□ 1.45
EDC3-214ENST00000568176 TRPC5Q9UL62 973 aaPredicted RBP24.09■■□□□ 1.45
EDC3-214ENST00000568176 KDM3BQ7LBC6 1761 aa24.09■■□□□ 1.45
EDC3-214ENST00000568176 MRC1P22897 1456 aa24.08■■□□□ 1.45
EDC3-214ENST00000568176 DDB1Q16531 1140 aa24.08■■□□□ 1.45
EDC3-214ENST00000568176 KRT24Q2M2I5 525 aa24.08■■□□□ 1.45
EDC3-214ENST00000568176 QTRT2Q9H974 415 aaKnown RBP24.08■■□□□ 1.45
EDC3-214ENST00000568176 TSPYL4Q9UJ04 414 aa24.08■■□□□ 1.45
EDC3-214ENST00000568176 TEFQ10587 303 aa24.07■■□□□ 1.44
EDC3-214ENST00000568176 TSPYL6Q8N831 410 aa24.07■■□□□ 1.44
EDC3-214ENST00000568176 HSP90AB1P08238 724 aaKnown RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms