RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 EZH2Q15910 746 aaKnown RBP11.23□□□□□ -0.61
HDGFL3-205ENST00000568129 PTF1AQ7RTS3 328 aa11.23□□□□□ -0.61
HDGFL3-205ENST00000568129 ITGB4P16144 1822 aa11.21□□□□□ -0.61
HDGFL3-205ENST00000568129 MORC1Q86VD1 984 aa11.21□□□□□ -0.61
HDGFL3-205ENST00000568129 PROM2Q8N271 834 aa11.21□□□□□ -0.61
HDGFL3-205ENST00000568129 ZCRB1Q8TBF4 217 aaKnown RBP11.21□□□□□ -0.61
HDGFL3-205ENST00000568129 EYA1Q99502 592 aa11.21□□□□□ -0.61
HDGFL3-205ENST00000568129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.21□□□□□ -0.61
HDGFL3-205ENST00000568129 EIF4A2Q14240 407 aaKnown RBP11.2□□□□□ -0.62
HDGFL3-205ENST00000568129 LY75O60449 1722 aa11.2□□□□□ -0.62
HDGFL3-205ENST00000568129 IGSF1Q8N6C5 1336 aa11.19□□□□□ -0.62
HDGFL3-205ENST00000568129 DOT1LQ8TEK3 1739 aa11.19□□□□□ -0.62
HDGFL3-205ENST00000568129 KCNQ2O43526 872 aa11.19□□□□□ -0.62
HDGFL3-205ENST00000568129 NKX1-1Q15270 411 aaPredicted RBP11.19□□□□□ -0.62
HDGFL3-205ENST00000568129 RAPGEF4Q8WZA2 1011 aa11.19□□□□□ -0.62
HDGFL3-205ENST00000568129 TATP17735 454 aaPredicted RBP11.18□□□□□ -0.62
HDGFL3-205ENST00000568129 USHBP1Q8N6Y0 703 aa11.18□□□□□ -0.62
HDGFL3-205ENST00000568129 LRP5O75197 1615 aa11.17□□□□□ -0.62
HDGFL3-205ENST00000568129 PPM1GO15355 546 aaPredicted RBP11.17□□□□□ -0.62
HDGFL3-205ENST00000568129 CYP27B1O15528 508 aa11.17□□□□□ -0.62
HDGFL3-205ENST00000568129 TNNT2P45379 298 aaPredicted RBP11.17□□□□□ -0.62
HDGFL3-205ENST00000568129 DDX54Q8TDD1 881 aaKnown RBP11.17□□□□□ -0.62
HDGFL3-205ENST00000568129 TOGARAM1Q9Y4F4 1720 aa11.17□□□□□ -0.62
HDGFL3-205ENST00000568129 KDRP35968 1356 aa11.16□□□□□ -0.62
HDGFL3-205ENST00000568129 QSER1Q2KHR3 1735 aa11.16□□□□□ -0.62
HDGFL3-205ENST00000568129 IL13P35225 146 aa11.16□□□□□ -0.62
HDGFL3-205ENST00000568129 PAPPAQ13219 1627 aa11.16□□□□□ -0.62
HDGFL3-205ENST00000568129 PCDH11XQ9BZA7 1347 aa11.15□□□□□ -0.62
HDGFL3-205ENST00000568129 PCDH11YQ9BZA8 1340 aa11.15□□□□□ -0.62
HDGFL3-205ENST00000568129 VIRMAQ69YN4 1812 aaKnown RBP11.15□□□□□ -0.62
HDGFL3-205ENST00000568129 TXNRD1Q16881 649 aa11.15□□□□□ -0.62
HDGFL3-205ENST00000568129 CASZ1Q86V15 1759 aa11.15□□□□□ -0.62
HDGFL3-205ENST00000568129 TAF1LQ8IZX4 1826 aa11.14□□□□□ -0.63
HDGFL3-205ENST00000568129 MTHFSP49914 203 aa11.14□□□□□ -0.63
HDGFL3-205ENST00000568129 ACSBG1Q96GR2 724 aa11.14□□□□□ -0.63
HDGFL3-205ENST00000568129 SPG7Q9UQ90 795 aa11.14□□□□□ -0.63
HDGFL3-205ENST00000568129 SRCAPQ6ZRS2 3230 aa11.14□□□□□ -0.63
HDGFL3-205ENST00000568129 COL3A1P02461 1466 aaPredicted RBP11.13□□□□□ -0.63
HDGFL3-205ENST00000568129 PRIM1P49642 420 aaKnown RBP11.13□□□□□ -0.63
HDGFL3-205ENST00000568129 NBPF14Q5TI25 921 aa11.13□□□□□ -0.63
HDGFL3-205ENST00000568129 COL24A1Q17RW2 1714 aa11.12□□□□□ -0.63
HDGFL3-205ENST00000568129 R3HDM1Q15032 1099 aaKnown RBP11.12□□□□□ -0.63
HDGFL3-205ENST00000568129 SLC27A3Q5K4L6 730 aa11.12□□□□□ -0.63
HDGFL3-205ENST00000568129 CC2D1BQ5T0F9 858 aaKnown RBP11.12□□□□□ -0.63
HDGFL3-205ENST00000568129 SCN11AQ9UI33 1791 aa11.12□□□□□ -0.63
HDGFL3-205ENST00000568129 PSDA5PKW4 1024 aaPredicted RBP11.11□□□□□ -0.63
HDGFL3-205ENST00000568129 PHKG2P15735 406 aa11.11□□□□□ -0.63
HDGFL3-205ENST00000568129 AMOTQ4VCS5 1084 aa11.11□□□□□ -0.63
HDGFL3-205ENST00000568129 IFNL2Q8IZJ0 200 aa11.11□□□□□ -0.63
HDGFL3-205ENST00000568129 ANO8Q9HCE9 1232 aaPredicted RBP11.11□□□□□ -0.63
HDGFL3-205ENST00000568129 LRRC4BQ9NT99 713 aa11.11□□□□□ -0.63
HDGFL3-205ENST00000568129 ZNF831Q5JPB2 1677 aa11.11□□□□□ -0.63
HDGFL3-205ENST00000568129 TUBGCP6Q96RT7 1819 aa11.1□□□□□ -0.63
HDGFL3-205ENST00000568129 ADAMTS7Q9UKP4 1686 aa11.1□□□□□ -0.63
HDGFL3-205ENST00000568129 DIAPH1O60610 1272 aaKnown RBP11.09□□□□□ -0.63
HDGFL3-205ENST00000568129 SLC15A2Q16348 729 aa11.09□□□□□ -0.63
HDGFL3-205ENST00000568129 PLEKHO1Q53GL0 409 aaPredicted RBP11.09□□□□□ -0.63
HDGFL3-205ENST00000568129 SULT6B1Q6IMI4 303 aa11.09□□□□□ -0.63
HDGFL3-205ENST00000568129 AEBP1Q8IUX7 1158 aa11.09□□□□□ -0.63
HDGFL3-205ENST00000568129 AKT1S1Q96B36 256 aa11.09□□□□□ -0.63
HDGFL3-205ENST00000568129 ERVV-2B6SEH9 535 aa11.08□□□□□ -0.64
HDGFL3-205ENST00000568129 HMGB2P26583 209 aaKnown RBP11.08□□□□□ -0.64
HDGFL3-205ENST00000568129 PIGBQ92521 554 aa11.08□□□□□ -0.64
HDGFL3-205ENST00000568129 C5P01031 1676 aa11.08□□□□□ -0.64
HDGFL3-205ENST00000568129 HSP90AB1P08238 724 aaKnown RBP11.07□□□□□ -0.64
HDGFL3-205ENST00000568129 PPP2R1AP30153 589 aa11.07□□□□□ -0.64
HDGFL3-205ENST00000568129 DCAF5Q96JK2 942 aa11.07□□□□□ -0.64
HDGFL3-205ENST00000568129 ZEB1P37275 1124 aaPredicted RBP11.06□□□□□ -0.64
HDGFL3-205ENST00000568129 SMARCC1Q92922 1105 aaPredicted RBP11.06□□□□□ -0.64
HDGFL3-205ENST00000568129 SYTL4Q96C24 671 aaPredicted RBP11.06□□□□□ -0.64
HDGFL3-205ENST00000568129 STK32BQ9NY57 414 aa11.06□□□□□ -0.64
HDGFL3-205ENST00000568129 KDM6AO15550 1401 aaPredicted RBP11.06□□□□□ -0.64
HDGFL3-205ENST00000568129 UBR3Q6ZT12 1888 aa11.06□□□□□ -0.64
HDGFL3-205ENST00000568129 MPRIPQ6WCQ1 1025 aa11.05□□□□□ -0.64
HDGFL3-205ENST00000568129 CICQ96RK0 1608 aaPredicted RBP11.05□□□□□ -0.64
HDGFL3-205ENST00000568129 SIPA1L3O60292 1781 aaPredicted RBP11.04□□□□□ -0.64
HDGFL3-205ENST00000568129 ZNF827Q17R98 1081 aa11.04□□□□□ -0.64
HDGFL3-205ENST00000568129 AKAP4Q5JQC9 854 aa11.04□□□□□ -0.64
HDGFL3-205ENST00000568129 ZNF530Q6P9A1 599 aaPredicted RBP11.04□□□□□ -0.64
HDGFL3-205ENST00000568129 PDGFDQ9GZP0 370 aaPredicted RBP11.04□□□□□ -0.64
HDGFL3-205ENST00000568129 COL5A3P25940 1745 aaPredicted RBP11.04□□□□□ -0.64
HDGFL3-205ENST00000568129 PALLDQ8WX93 1383 aa11.03□□□□□ -0.64
HDGFL3-205ENST00000568129 MYH14Q7Z406 1995 aaKnown RBP11.03□□□□□ -0.64
HDGFL3-205ENST00000568129 SGIP1Q9BQI5 828 aa11.03□□□□□ -0.64
HDGFL3-205ENST00000568129 ATG3Q9NT62 314 aa11.03□□□□□ -0.64
HDGFL3-205ENST00000568129 TMOD3Q9NYL9 352 aa11.03□□□□□ -0.64
HDGFL3-205ENST00000568129 CCNL1Q9UK58 526 aaPredicted RBP11.03□□□□□ -0.64
HDGFL3-205ENST00000568129 MRC1P22897 1456 aa11.03□□□□□ -0.64
HDGFL3-205ENST00000568129 C4BP0C0L5 1744 aa11.03□□□□□ -0.64
HDGFL3-205ENST00000568129 HMOX1P09601 288 aa11.02□□□□□ -0.65
HDGFL3-205ENST00000568129 PTGER2P43116 358 aa11.02□□□□□ -0.65
HDGFL3-205ENST00000568129 MTHFSDQ2M296 383 aaKnown RBP11.02□□□□□ -0.65
HDGFL3-205ENST00000568129 SLC16A10Q8TF71 515 aa11.02□□□□□ -0.65
HDGFL3-205ENST00000568129 CFAP53Q96M91 514 aa11.02□□□□□ -0.65
HDGFL3-205ENST00000568129 SPON1Q9HCB6 807 aa11.02□□□□□ -0.65
HDGFL3-205ENST00000568129 ASAP1Q9ULH1 1129 aa11.02□□□□□ -0.65
HDGFL3-205ENST00000568129 LOC102724428A0A0B4J2F2 783 aa11.01□□□□□ -0.65
HDGFL3-205ENST00000568129 KCNQ4P56696 695 aa11.01□□□□□ -0.65
HDGFL3-205ENST00000568129 SIK1P57059 783 aa11.01□□□□□ -0.65
HDGFL3-205ENST00000568129 RALBP1Q15311 655 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms