RNA–Protein interactions for RNA: ENST00000567393.5

NEIL1-213, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 1,221 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-213ENST00000567393 TNS1Q9HBL0 1735 aaKnown RBP17.99■□□□□ 0.47
NEIL1-213ENST00000567393 APBA3O96018 575 aa17.99■□□□□ 0.47
NEIL1-213ENST00000567393 PCDH11XQ9BZA7 1347 aa17.98■□□□□ 0.47
NEIL1-213ENST00000567393 PCDH11YQ9BZA8 1340 aa17.98■□□□□ 0.47
NEIL1-213ENST00000567393 IL13P35225 146 aa17.98■□□□□ 0.47
NEIL1-213ENST00000567393 EN1Q05925 392 aaPredicted RBP17.97■□□□□ 0.47
NEIL1-213ENST00000567393 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.97■□□□□ 0.47
NEIL1-213ENST00000567393 SPG7Q9UQ90 795 aa17.97■□□□□ 0.47
NEIL1-213ENST00000567393 DIAPH1O60610 1272 aaKnown RBP17.96■□□□□ 0.47
NEIL1-213ENST00000567393 DDX10Q13206 875 aaKnown RBP17.96■□□□□ 0.47
NEIL1-213ENST00000567393 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
NEIL1-213ENST00000567393 CAMKK2Q96RR4 588 aa17.95■□□□□ 0.46
NEIL1-213ENST00000567393 KDRP35968 1356 aa17.94■□□□□ 0.46
NEIL1-213ENST00000567393 PPP2R1AP30153 589 aa17.94■□□□□ 0.46
NEIL1-213ENST00000567393 ACSBG1Q96GR2 724 aa17.94■□□□□ 0.46
NEIL1-213ENST00000567393 COL3A1P02461 1466 aaPredicted RBP17.94■□□□□ 0.46
NEIL1-213ENST00000567393 PLSCR1O15162 318 aa17.93■□□□□ 0.46
NEIL1-213ENST00000567393 KCNQ2O43526 872 aa17.93■□□□□ 0.46
NEIL1-213ENST00000567393 NHSQ6T4R5 1651 aa17.93■□□□□ 0.46
NEIL1-213ENST00000567393 CYP27B1O15528 508 aa17.92■□□□□ 0.46
NEIL1-213ENST00000567393 EZH2Q15910 746 aaKnown RBP17.92■□□□□ 0.46
NEIL1-213ENST00000567393 SULT6B1Q6IMI4 303 aa17.92■□□□□ 0.46
NEIL1-213ENST00000567393 PTF1AQ7RTS3 328 aa17.92■□□□□ 0.46
NEIL1-213ENST00000567393 AEBP1Q8IUX7 1158 aa17.92■□□□□ 0.46
NEIL1-213ENST00000567393 PKD1L3Q7Z443 1732 aa17.92■□□□□ 0.46
NEIL1-213ENST00000567393 SHANK3Q9BYB0 1731 aa17.92■□□□□ 0.46
NEIL1-213ENST00000567393 AMOTQ4VCS5 1084 aa17.91■□□□□ 0.46
NEIL1-213ENST00000567393 PLEKHO1Q53GL0 409 aaPredicted RBP17.9■□□□□ 0.46
NEIL1-213ENST00000567393 SBF2Q86WG5 1849 aa17.89■□□□□ 0.45
NEIL1-213ENST00000567393 PRIM1P49642 420 aaKnown RBP17.89■□□□□ 0.45
NEIL1-213ENST00000567393 NKX1-1Q15270 411 aaPredicted RBP17.89■□□□□ 0.45
NEIL1-213ENST00000567393 RALBP1Q15311 655 aa17.89■□□□□ 0.45
NEIL1-213ENST00000567393 IFNL2Q8IZJ0 200 aa17.89■□□□□ 0.45
NEIL1-213ENST00000567393 SYTL4Q96C24 671 aaPredicted RBP17.89■□□□□ 0.45
NEIL1-213ENST00000567393 PHKG2P15735 406 aa17.88■□□□□ 0.45
NEIL1-213ENST00000567393 RGPD3A6NKT7 1758 aaPredicted RBP17.88■□□□□ 0.45
NEIL1-213ENST00000567393 RGPD4Q7Z3J3 1758 aa17.88■□□□□ 0.45
NEIL1-213ENST00000567393 ZNF316A6NFI3 1004 aaPredicted RBP17.87■□□□□ 0.45
NEIL1-213ENST00000567393 U2SURPO15042 1029 aaKnown RBP17.87■□□□□ 0.45
NEIL1-213ENST00000567393 NUDCQ9Y266 331 aa17.87■□□□□ 0.45
NEIL1-213ENST00000567393 HSP90AB1P08238 724 aaKnown RBP17.86■□□□□ 0.45
NEIL1-213ENST00000567393 HMOX1P09601 288 aa17.86■□□□□ 0.45
NEIL1-213ENST00000567393 ZNF530Q6P9A1 599 aaPredicted RBP17.86■□□□□ 0.45
NEIL1-213ENST00000567393 DOT1LQ8TEK3 1739 aa17.85■□□□□ 0.45
NEIL1-213ENST00000567393 RREB1Q92766 1687 aa17.85■□□□□ 0.45
NEIL1-213ENST00000567393 TXNRD1Q16881 649 aa17.84■□□□□ 0.45
NEIL1-213ENST00000567393 NBPF14Q5TI25 921 aa17.84■□□□□ 0.45
NEIL1-213ENST00000567393 C1orf141Q5JVX7 400 aa17.83■□□□□ 0.44
NEIL1-213ENST00000567393 PROM2Q8N271 834 aa17.82■□□□□ 0.44
NEIL1-213ENST00000567393 DCAF5Q96JK2 942 aa17.82■□□□□ 0.44
NEIL1-213ENST00000567393 MYBBP1AQ9BQG0 1328 aaKnown RBP17.81■□□□□ 0.44
NEIL1-213ENST00000567393 MPRIPQ6WCQ1 1025 aa17.81■□□□□ 0.44
NEIL1-213ENST00000567393 BTAF1O14981 1849 aa17.81■□□□□ 0.44
NEIL1-213ENST00000567393 NUP188Q5SRE5 1749 aa17.81■□□□□ 0.44
NEIL1-213ENST00000567393 U2AF1L5P0DN76 240 aaPredicted RBP17.8■□□□□ 0.44
NEIL1-213ENST00000567393 U2AF1Q01081 240 aaKnown RBP eCLIP17.8■□□□□ 0.44
NEIL1-213ENST00000567393 SLC27A3Q5K4L6 730 aa17.8■□□□□ 0.44
NEIL1-213ENST00000567393 TMOD3Q9NYL9 352 aa17.8■□□□□ 0.44
NEIL1-213ENST00000567393 ERVV-2B6SEH9 535 aa17.79■□□□□ 0.44
NEIL1-213ENST00000567393 AKAP4Q5JQC9 854 aa17.79■□□□□ 0.44
NEIL1-213ENST00000567393 TOGARAM1Q9Y4F4 1720 aa17.78■□□□□ 0.44
NEIL1-213ENST00000567393 R3HDM1Q15032 1099 aaKnown RBP17.78■□□□□ 0.44
NEIL1-213ENST00000567393 SMARCC1Q92922 1105 aaPredicted RBP17.78■□□□□ 0.44
NEIL1-213ENST00000567393 RSPH6AQ9H0K4 717 aa17.78■□□□□ 0.44
NEIL1-213ENST00000567393 KDM6AO15550 1401 aaPredicted RBP17.78■□□□□ 0.44
NEIL1-213ENST00000567393 PSDA5PKW4 1024 aaPredicted RBP17.77■□□□□ 0.44
NEIL1-213ENST00000567393 FCHSD2O94868 740 aa17.77■□□□□ 0.44
NEIL1-213ENST00000567393 PRKAR2BP31323 418 aa17.77■□□□□ 0.44
NEIL1-213ENST00000567393 MTHFSDQ2M296 383 aaKnown RBP17.77■□□□□ 0.44
NEIL1-213ENST00000567393 GAS2L2Q8NHY3 880 aa17.77■□□□□ 0.44
NEIL1-213ENST00000567393 PIGBQ92521 554 aa17.77■□□□□ 0.44
NEIL1-213ENST00000567393 PRKRIP1Q9H875 184 aaPredicted RBP17.77■□□□□ 0.44
NEIL1-213ENST00000567393 PALLDQ8WX93 1383 aa17.77■□□□□ 0.43
NEIL1-213ENST00000567393 HMGB2P26583 209 aaKnown RBP17.76■□□□□ 0.43
NEIL1-213ENST00000567393 STK32BQ9NY57 414 aa17.76■□□□□ 0.43
NEIL1-213ENST00000567393 CABP4P57796 275 aa17.75■□□□□ 0.43
NEIL1-213ENST00000567393 ANO8Q9HCE9 1232 aaPredicted RBP17.75■□□□□ 0.43
NEIL1-213ENST00000567393 LRRC4BQ9NT99 713 aa17.74■□□□□ 0.43
NEIL1-213ENST00000567393 CCNL1Q9UK58 526 aaPredicted RBP17.74■□□□□ 0.43
NEIL1-213ENST00000567393 MAP3K5Q99683 1374 aa17.73■□□□□ 0.43
NEIL1-213ENST00000567393 PAPPAQ13219 1627 aa17.72■□□□□ 0.43
NEIL1-213ENST00000567393 SLC15A2Q16348 729 aa17.72■□□□□ 0.43
NEIL1-213ENST00000567393 RNMTO43148 476 aaKnown RBP17.71■□□□□ 0.43
NEIL1-213ENST00000567393 NEFMP07197 916 aa17.71■□□□□ 0.43
NEIL1-213ENST00000567393 PHACTR3Q96KR7 559 aa17.71■□□□□ 0.43
NEIL1-213ENST00000567393 PNNQ9H307 717 aaKnown RBP17.71■□□□□ 0.43
NEIL1-213ENST00000567393 LY75O60449 1722 aa17.7■□□□□ 0.42
NEIL1-213ENST00000567393 GNAT3A8MTJ3 354 aa17.7■□□□□ 0.42
NEIL1-213ENST00000567393 ATG3Q9NT62 314 aa17.7■□□□□ 0.42
NEIL1-213ENST00000567393 ASAP1Q9ULH1 1129 aa17.7■□□□□ 0.42
NEIL1-213ENST00000567393 MRC1P22897 1456 aa17.69■□□□□ 0.42
NEIL1-213ENST00000567393 KCNQ4P56696 695 aa17.69■□□□□ 0.42
NEIL1-213ENST00000567393 NFATC2IPQ8NCF5 419 aa17.69■□□□□ 0.42
NEIL1-213ENST00000567393 SLC52A2Q9HAB3 445 aa17.69■□□□□ 0.42
NEIL1-213ENST00000567393 LGR6Q9HBX8 967 aa17.69■□□□□ 0.42
NEIL1-213ENST00000567393 ITGB4P16144 1822 aa17.68■□□□□ 0.42
NEIL1-213ENST00000567393 LOC102724428A0A0B4J2F2 783 aa17.68■□□□□ 0.42
NEIL1-213ENST00000567393 SIK1P57059 783 aa17.68■□□□□ 0.42
NEIL1-213ENST00000567393 ZNF827Q17R98 1081 aa17.68■□□□□ 0.42
NEIL1-213ENST00000567393 AKT1S1Q96B36 256 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms